Dgla040596.1
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- mod(mdg4)_1
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:439922967-439924211[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 0.00038 0.3 13.3 0.0 21 37 212 229 200 236 0.79 2 4 5.9e-08 4.7e-05 25.5 0.0 5 37 248 280 246 284 0.90 3 4 0.091 72 5.7 0.0 18 42 311 335 300 338 0.78 4 4 1e-11 8.1e-09 37.5 0.0 5 38 358 390 357 396 0.90
Sequence Information
- Coding Sequence
- atgaattttttgaaatttagtgATATAAAAGAAAACCTATCTCTAACTGCAAAAGAGTTTTATCATGCATGTTATGATTTTGATGTTCAATTTATACAAAACGGTGAAATAATAGATGCTCACAAAAGTATTCTATCCTCATCCAGTGACTACTTctatgaaattttgaaaaacttttcaaataatGAAATGGCCTGCATTATAATTCCtgatattaattttgatattttaaaattggttataaatttcatttactCTGGTGAATTAGAAATTCAAGCAgtaaatttaccttattttcTAGATATTTGCGATATATTTCGCTTAAAAAGTTTTATGAATTATAACAAAGGTGATATTCAAAACGTTACAAAACTAAATGATTTTCCTAATAATATGAATGAATATGATGTTGgctattttgaaattaataattcaGGAAATGATGAACTTTTGAGTAAATGTACCATAAACAATGAATTCATAGAAGCCCAAAATGTCGCTGAAAGTTTAGAAGAATTAGTAGCAAAACCccataaaaaaagaaaaactggTAAAGTCATAAAGAAAAAGTATTACAGTCAAAGTCTTATAGGTAAAGCAGTGGAAGAACTAAAGCTTGGCAAATCTTTGCGTgatgtttcaaataaatttgatatacCACGTTCAACACTTTATACTTATTCGAAACATAGattgaatgaaattaaaaaaggtAATAATTTATCGTCACGTTACAGTTCCATTAACGAAGCTATAAAGGAAattgttcaaaataatttaagttaTCAAAAAGCAGCACAGATGTTTAATATACCAAAAACGATACTATGGCGCCAAGTGAAaatctttaataaaaataaacaagatactaattcgaattcaaataacaataaaaaattagcCGCTATAAGGGAGCTAGAATTGGGCGCTTCTTTGAATGATGTTAGTAAGAAGTATAACATTGGACTTTCAACATTATATCGtgaaaaacgaaaattatattcaaatgGGAGATTACCTAAAACTGTTAAATTGAAAACCTATAAACGTGATAGTACATTTCATATCAATATCAATTTAGCTGTAGAGGCATGTAAAAAAGGTTTATCTCAAAGTCGAGCTTCTCTTATATATAATATACCAAAGACAACAATATGGAGGCACATGAAACAActacataataataaattatgcACAACTGATGATTTAGAAAATGaatctaaaatattaaataaaacagtataa
- Protein Sequence
- MNFLKFSDIKENLSLTAKEFYHACYDFDVQFIQNGEIIDAHKSILSSSSDYFYEILKNFSNNEMACIIIPDINFDILKLVINFIYSGELEIQAVNLPYFLDICDIFRLKSFMNYNKGDIQNVTKLNDFPNNMNEYDVGYFEINNSGNDELLSKCTINNEFIEAQNVAESLEELVAKPHKKRKTGKVIKKKYYSQSLIGKAVEELKLGKSLRDVSNKFDIPRSTLYTYSKHRLNEIKKGNNLSSRYSSINEAIKEIVQNNLSYQKAAQMFNIPKTILWRQVKIFNKNKQDTNSNSNNNKKLAAIRELELGASLNDVSKKYNIGLSTLYREKRKLYSNGRLPKTVKLKTYKRDSTFHININLAVEACKKGLSQSRASLIYNIPKTTIWRHMKQLHNNKLCTTDDLENESKILNKTV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00456301;
- 90% Identity
- iTF_00456301;
- 80% Identity
- iTF_00456301;