Dgla033315.2
Basic Information
- Insect
- Diogma glabrata
- Gene Symbol
- -
- Assembly
- GCA_963693315.1
- Location
- OY856186.1:333823400-333826135[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 4 1.6e-11 1.2e-08 36.9 0.0 1 39 344 383 344 387 0.91 2 4 6.8e-12 5.4e-09 38.1 0.0 2 39 399 436 398 439 0.94 3 4 6e-17 4.7e-14 54.2 0.0 1 45 453 498 453 498 0.97 4 4 8.9e-19 7e-16 60.1 0.0 1 43 505 548 505 549 0.96
Sequence Information
- Coding Sequence
- ATGTTAAAGATTCAGATCAGTAACAGTCTTTTACGAACTGCAGAACATCTTAAAATTAAAGGACTTTGTGAGATAAGCGAAGATTACCCTGAACcttgtgttaaaaaaaaattaaaaaacaatcaaagGATCCATTATCAAAGTATTAAAACTCaagatataaatattaaatgtaatAGTCTTAGTTCGAATAATATACTAGATACTTCGAGTCAAGCCATAAATAGTTCAAATGAAGATTTAACAAAACAGCATAATGATACATCATCACAATCGTCTTCTATAATATTGGAACCACGTAGTGTAGCAAGTAACGATAATAGAGAAAAAAACATGACCAGTCTCGGAATGGGAATGGGCATGaatggaGGATCACTGATGGGAGTATCAATGCAATTTTTAGATTTCGCGCCTGAACCACCAGCTCCATCAGCAACACCAGTCACTGAACACGTAGAACTTAATTCAAATTCAACACAAGATCACGAAATTCGTAGAAAATTTGAAACATTGCGATCTTTAGATCCAAGTGATAATTTGGAAGTAGATCGTTTGTCTCAACATTCAATACATCATTTAACACAACAATCACTATCTTCGCCACATCACAGTGAAAACAGTCGGGATCATCTCAGACAACCTCTGCCGGatacaattattataaaacaacaAGTTCAAATGGAAGGAGATCAAGGtcaaaatcaatcaattcaACAACATGTGCAGCAGCAGCAACAACAGCATCAACAACAGCAGCAGCAACATCATCAGCAACAGATGCATGACCATCAGGGACAGTCAAGTAATATGGATATAGATCAAAATAGTGGGTTGAAACAAGAAGGCGGCTTACATGGGATGATAATAACCCCTGAGATTGTATCAATGATGTCACCAACCCAAATGGATCTCTACCAATCTGATACAAGTGAGGATTCtaaaatgcttttacattctGAAATTAAAGTAGAATATACTGAACTAACATCTCCTAATGATCCTCGGAATGCAGCTGGACCGAAAACCTGGACCCCAGAAGACATGGAATCAGCATTGGACGCTCTACGAACACATCATATGAGTTTATCCAAAGCTTCTGTTACATATGGTATACCACCTACAACATTATGGCAACGAGCACATCGTCTAGGAATAGATACCCCTAAAAAGGAAGGTCCTCTTAAATCATGGAATGAAGACTCTTTAAATTGTGCTCTTGATGCGTTACGTACCGGACAAATTTCTGCTAATAAAGCATCCAAAGCATATGGCATTCCATCTTCAACGTTATATAAAATTGCACGTCGGGAAGGCATTAGATTAGCCGCACCGTTTAATGCAGCGCCCACCACTTGGACTCAAGAGGATTTAGATAGGGCCTTAGAAGCAATAAGAAGTGGACAAGCATCAGTACAAAAAGCCAGTGTTGAATTTGGTATACCTACAGGAACGCTCTATGGTAGATGTAAACGAGAGGGAATAGAGTTGTCAAGATCAAATCCAACACCATGGTCAGAAGATGCAATGATGGAAGCATTAGAAGCTGTTCgcGTCGGACAAATGTCAATCAACCAAGCTGCCATTCATTACAATTTGCCTTATAGTTCGTTGTATGGACGTTTTAAACGTGGGAAATACGATTCGGGTTCAGGTGAAGGGCATGTGATAGATACAAGTCCAGAAAGTTCGCAAAAATATAGTCCAGGTATGTTGTCACATCAACAACCACAATCACAAGATTCATCACACTTGCAAACAAATCAACAGATTTCAAGTAGTCAAGACATGTATCTAATTACACCGAAACAAGAAAGAAGTTGA
- Protein Sequence
- MLKIQISNSLLRTAEHLKIKGLCEISEDYPEPCVKKKLKNNQRIHYQSIKTQDINIKCNSLSSNNILDTSSQAINSSNEDLTKQHNDTSSQSSSIILEPRSVASNDNREKNMTSLGMGMGMNGGSLMGVSMQFLDFAPEPPAPSATPVTEHVELNSNSTQDHEIRRKFETLRSLDPSDNLEVDRLSQHSIHHLTQQSLSSPHHSENSRDHLRQPLPDTIIIKQQVQMEGDQGQNQSIQQHVQQQQQQHQQQQQQHHQQQMHDHQGQSSNMDIDQNSGLKQEGGLHGMIITPEIVSMMSPTQMDLYQSDTSEDSKMLLHSEIKVEYTELTSPNDPRNAAGPKTWTPEDMESALDALRTHHMSLSKASVTYGIPPTTLWQRAHRLGIDTPKKEGPLKSWNEDSLNCALDALRTGQISANKASKAYGIPSSTLYKIARREGIRLAAPFNAAPTTWTQEDLDRALEAIRSGQASVQKASVEFGIPTGTLYGRCKREGIELSRSNPTPWSEDAMMEALEAVRVGQMSINQAAIHYNLPYSSLYGRFKRGKYDSGSGEGHVIDTSPESSQKYSPGMLSHQQPQSQDSSHLQTNQQISSSQDMYLITPKQERS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -