Basic Information

Gene Symbol
Arid2_1
Assembly
GCA_963693315.1
Location
OY856186.1:385612152-385635778[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 2.6e-24 3e-20 74.9 0.0 2 89 47 132 46 132 0.95
2 3 8.3 9.5e+04 -3.7 0.1 21 52 1324 1356 1312 1368 0.70
3 3 5.9 6.8e+04 -3.2 1.3 54 65 1535 1546 1506 1580 0.50

Sequence Information

Coding Sequence
atgaatgtaaacgatacaaaagaaaatattttaccaTCAGAAACAAACAGTGAAGAAGTATCGAATAGTAATGtagaaaaaacagttttttttctcaAGACTGAAATTAAGAAAGAAAAAGATGACGAAGAAAAAAGTCGTGATAGTTTTTATAGGATTTTAAAGCAATTTCATGATACGAAAGGTACACCTTATCCAAAACTCCCAAAAATAGCAGGAAAGGAAGTTGATTTGCATAAGCTGTATAATATTGTAATAGGTAAAGGTGGATGGTTGAAAgTAAATAATCGCAATGAGTGGAATGATGTGTTAACGGAATGTGGATTACCTGCCAAATGTGTGAATGCTACCGTGgcaattaaacatttatatattcgaTATTTGGATAGATATGAAAAAACACATTATCATAAAGATGATAATGATGGTCGAGAGAACGATGAGGAAGAAGAAGTTCGACATAAAAGATGGTCGGCTAGATCCTTGAATTCTGTTCCAATGATTTATAACTACAATCAACATAACGTATCAGACACAGCTAGATATAGTCATAAACTCTCAACCGATTTGTATAAACCTTCagaatatgaaaaattatttatgtcCTTGCTATCACCTTTACCAAATGAACAAGATTTCGCTATAAATGTTTGTACTTTAATGGCCAACGAAAGCAAACCAACACTAAAAgttgaaaaatgtccaaaaTTAGTCGATGCATTACTTGCACATGCCGGCATATATCATCACTatacAACTCGTGAAATTTTTATAGAGTTTTATATGAAAACTCGTCGCCATTCATTGCAATCATTTTGGAATGATTGCTTAGTTGATAAACCAGACATTTTGGAATTATCATACGATGATTATTTTGCTTCAGAtgataatttaacaaaaaagaaaaatgaaattatatcaaaaataaaacaaatacacTCTTGTATCGATGATGAAAGTAGTCCAGAGGAAAAGATTATATCAAATTTAGATTTCTTATGTTTGGGGCGTGGTTTAGGAACCAACGATTACATCGGTCAAAGAGTACACCAAATTGCATCAATTCTACGTAATTTAAGTTTTATAGATGAAAATTTAGGAATTCTTGCAAAAAATCGAACATATTTACGTTTTTTGATTATGTGCTCAAATATACATTGGGGAAACTTACAGCATATGGGATTGGATATGCTAGGAAATATATCATCAGAATTGGAGTTAAATGATCCAGCTGGTGATGATTTGGCTCGATACTTATTGAAAACAATATCCGAAGGACTAGAAAGTACTGATCGTGCTGTGGTGATCAGTAGCTTGGAAATTTTATACAAACTTTGCCAGCAGGAGAATAATGAAgatgttttatataagtgtttgcATAACAAAATGTATAATCAAGTTTGCGTTTATTTATGTTTGAGTGACATTATGTTGCTATTATACACCTTAGAATGTATATATGCTCTATCATCATTGGGTGAAAAGTCTTGTAATGCTATATGCCATATCCGAGGAACAATTGATACATTAGTATCATTGGTAACCGTTGAAGCACAAAGTTATGGTCCAGATGCTTGTATTTTAATGAGAGTTGTTGAAACAGTTCCCGGAACTAATGCAACCAGTCAAAACAATCAAGTTAATGTTACGAACCTGAATAACGTTTCAATGACCAATCAAATAAGTTCAACCGATTCCAAAATTCTTGTTGTTGAGAATAAATTGAATGTATCGAGTCCTCAACCTCAAATGACTCCATCAACTTCCGTAACATCAAACATACAAATTAGTTCTCCTATTCGAACAAGTTCATCTGTAAAAGAAAACGCGAAACAATCAAGTCCAGCACCTCAAACCGAAAAAGaaattaagaaacaaaattcTTTAGCGGAAAAACAAGCACAGCAACAGATATTTCTAGAAAATGAACAATTTGCATTAACCTGGCTTCGACAAACATTCGAACCAGATCTAACATCTGTAACAAGAATAGAGCAACAAGActtgtataaattatatatgtcGGGGAGTTCTCAAATAGGTAAACGTGGATTTGTTTCTCCAATGCATTTTCCAAAATGTGTGCGATCAGTTTTTGGGAGTGGAGTTGGACCAAACCCCATCAAAATGGACCAACATGGAAAAGAAGTGACAAACTACTTTTATGAAGGAATTAAAATTCGTCCTATGACCCAACAAACATCAAATCCACCAAAACCCAGCGTAGTTGCTAAAGTGCAACCTATTAATAGTACAGTAATTCAACAACAGAAGTGCAATAATATATTAGCAACACAATTAGCTGGAAATAATAAAACTGTAAGTCCTCAGCAATTTAGTTCTCAACAAATAAATCAAGCTAAACAAACCTCGGTTATACAACAGAATCAAAAATTACTTTCCCAGGGATCAATACCGCAAACATCTTCATTATTACATAAAGTTTTAATTACACCAAATCAACAAACATCAAATATCGTAGATAATCAATCGAGTGTAATTGTATCAAGTACACAATCCACGGTAATAACATCACCCCAAACACAATCATCActtattaaaagtttattagCAAATAAGGTAACTACAGGTGATGGTGGTAACCAACAAGCTTCAACTACTAATAGTATTTCAACATGTTTAGTTTCTCCGAATGTCACTGTGCATCAGGTTGCGCAACgtcaacaaatacaaaaacaaaaagaattagCAAAgcaacaacacataaatataacattacaaaataacaacaatttaAAGTTATGTAACGCTCCCATTTTACCACCGCCATTGGCGAGTACAACACTCACTTCGAATTCTGAAAAATTAATGGAACAATCATATGTCAATCGTGACGTAGTTCCACCACTGGCACCACTTAGTGGTTCGAATGCGACAATACgtcaaataacattttcaacaaaaatCGATGAAGATTCAAATTCAACGGGAAACCATTCAATGTCTTCCTCAAGTTTAAATCAAATGGATGGTGATAGCTCGCGGACAAGCTTCGATGAAATTAATATTCATTCTGATGATGATTTATTAAACTCACGTGATATGTTATTTAAACAACAGTCGCAAGTGGTAACGGCTAATAAAATGTTAGCTGATTTATTAGAGAAAAAATCATTAGAACCGCCTAATTGTTTTAATTCTGTAATACAAAATGATAATCCACTTAAACGAAAAATCGAAGCGAGTGgggaaaatgaaattggaccCGAAGAAAAACgtataaatcatttaaataatgGCGAGTTaatggaagaaaatattgttCGACCATCAGCGAAAGCTGCTGATTTATATGCTGAGCTTGCAGCTTCGATGTTGGAAGATGAGGAAATCGAAGATGAGGCTATTAATCCAGCTAAACATATTCAAAACATCAGTTCTCAAATTCCCGCACGAATTGAGCTTAAAAAAACACCGATAATTACTCCTCCGCAACAGAGTCCACAAAAAATTCAAGCGATTGTACAACAAGGTCAAAATTTATCCAACACAATTATTCAAAATCAAACTCATTCTCATATCCATCAGCAACAACCACAACAACAAATGATAACGGTTCCAATGTCTAGACAAATCCTAATGTCACCAAATAATCAAGCTCAAGTAATGCTTTCACCGCCCACACATCATCCAATGGCAGGGCAAGTAACACAAACTACtgcaaaaatcaaaacagaAACTGGATACCAAACTGTTCCTGTTTTATTGCAACATACTCCCGCAACCAGTATGCAACTTCAAAAACAAATGAATCCTGGTAATCAAATAATTCAACATCCATCGATTATGCATCAAAATCCAAACCAAACTCAATATATTTTAACAACAAATCAACAAGGACAAACTGTAGTACTAGCTCAGAATCCTCAACCCCAAATGCATCAAACCGTTCTCGTTACACAAACACCACAACAACAAGGAACATCtgcaaaaactattataatTCTTCAACAACAACCGGGTTCAAACACTACTCAAATACAACAAGGAACAATCATGAATGCGGTTAATTCTAATTCTGGCACCCCACAAAAAGTTATAATGACAACTCAACAGGGACAACAAGTACTGGTGACACAAGTTCCAAGACCACTTCAACATCATGTAATTATGAATCATCCTCTTAATTCTGGCAATCAACAACAAATAGTTAATCAAAATAATCAGTTAATGTCATCAAACACACAACAAATAGTTATACAGACCAATCCTCAACTATTTGGAAGCAATCATCAACAACAAcatattataaatcaaaatcCACAGCAAACTATTTCACAAGTTCCGGTTTCTGTAACCTCCACAATGACGCAAACACCACAAATATTAGTCCATCATCAACAACCATATCAAGAAAGAAAACTTATTGTCGATTCAAGTTCATTGGATAAATCTACAGAATTAAAACTTAGTAATCATCAGCAAATTTTGAATATACAGCCGCAATCCCATATAATACTGCAACAACCAATTCAACAAAAATCTCATTCTGAAACTCAAGTTCAAACGACTGTTAATTCGCAACATTTACAACAAATTTCACAGTCAATTCAACAACAGTTATCACAAGCTACCCAACAGCAAATAAATCAACTTGTGCAACAACAGCAGATATCGGTGCCTGTGCAACAACACCAACAGATTTCACAATCTATTCAACAACAAATTAACCaacatatacaacaaaatataaccCAGTCcgtacaacaacaacaaacacaaTTGATTCAACCACAATTGAATCAGCCACAGCCGCCCATTACTCAATTTGTGCAACAGCAAACAACACAACAACCTGTACAACAATCCCAAACACCAATACTGAATCAAACAGCTTGTTCCACACAACAACGTccaaatcaaaatattattcaaaataataaaattcaaagtCAAAATGTTGTTCAGAATCCTGTTCCAAAGCCTGTTGTGGCGCCTGTTATAAAACATGAACCTGTTGTAAAAGTtgaaattgaattatttgataataattgGTTATGGGTTTGTGATTGGCGTGGGTGTCCAAAgAGAAAATTTCGATCAGCAATGGATGTTTATGTCCACGCTTGTACAGTTCACTGTCCTGATAATCTTGATGCTGGTGCTGATATATATTGTCAATGGGGACTTGGTCCAAACTTATGTGATAACTTACCCAGAAAACGATTTTCTTTGATGACTCATTTATTTGATCGTCACTGTACAATTGAATCATTTAAAATTGCAATGCAAAGACGACTTGCTACTGGTAATTCTGTACTACCCACTCAAACTCAACCAGTTACTATAATTAAGCAACCATCACCGCCATCAACTACTACTGAGACTACATCTACGACATCATCTACTTCATCAAAGTCGTCCAATGCTGCTATGCATGCAATTAAAAGACATGCACATGATTATGGGACATCTAAAGAATTATTgGATGAAAATGAAGGTCCTGTTACAAAGAGTATAAGGTTAACTGCGGCATTGATTTTAAGAAATCTCGTTAATTATAGCAGTTCCGCGAAAAgaAGCTTACGTTATTATGAACCACATCTAGCTGGTGTTGCACTAAGTAATGTTGAATCAAGTCGAACTATAGCCCAAGTATTATATGAAATGAACGAAACTCTCccactttaa
Protein Sequence
MNVNDTKENILPSETNSEEVSNSNVEKTVFFLKTEIKKEKDDEEKSRDSFYRILKQFHDTKGTPYPKLPKIAGKEVDLHKLYNIVIGKGGWLKVNNRNEWNDVLTECGLPAKCVNATVAIKHLYIRYLDRYEKTHYHKDDNDGRENDEEEEVRHKRWSARSLNSVPMIYNYNQHNVSDTARYSHKLSTDLYKPSEYEKLFMSLLSPLPNEQDFAINVCTLMANESKPTLKVEKCPKLVDALLAHAGIYHHYTTREIFIEFYMKTRRHSLQSFWNDCLVDKPDILELSYDDYFASDDNLTKKKNEIISKIKQIHSCIDDESSPEEKIISNLDFLCLGRGLGTNDYIGQRVHQIASILRNLSFIDENLGILAKNRTYLRFLIMCSNIHWGNLQHMGLDMLGNISSELELNDPAGDDLARYLLKTISEGLESTDRAVVISSLEILYKLCQQENNEDVLYKCLHNKMYNQVCVYLCLSDIMLLLYTLECIYALSSLGEKSCNAICHIRGTIDTLVSLVTVEAQSYGPDACILMRVVETVPGTNATSQNNQVNVTNLNNVSMTNQISSTDSKILVVENKLNVSSPQPQMTPSTSVTSNIQISSPIRTSSSVKENAKQSSPAPQTEKEIKKQNSLAEKQAQQQIFLENEQFALTWLRQTFEPDLTSVTRIEQQDLYKLYMSGSSQIGKRGFVSPMHFPKCVRSVFGSGVGPNPIKMDQHGKEVTNYFYEGIKIRPMTQQTSNPPKPSVVAKVQPINSTVIQQQKCNNILATQLAGNNKTVSPQQFSSQQINQAKQTSVIQQNQKLLSQGSIPQTSSLLHKVLITPNQQTSNIVDNQSSVIVSSTQSTVITSPQTQSSLIKSLLANKVTTGDGGNQQASTTNSISTCLVSPNVTVHQVAQRQQIQKQKELAKQQHINITLQNNNNLKLCNAPILPPPLASTTLTSNSEKLMEQSYVNRDVVPPLAPLSGSNATIRQITFSTKIDEDSNSTGNHSMSSSSLNQMDGDSSRTSFDEINIHSDDDLLNSRDMLFKQQSQVVTANKMLADLLEKKSLEPPNCFNSVIQNDNPLKRKIEASGENEIGPEEKRINHLNNGELMEENIVRPSAKAADLYAELAASMLEDEEIEDEAINPAKHIQNISSQIPARIELKKTPIITPPQQSPQKIQAIVQQGQNLSNTIIQNQTHSHIHQQQPQQQMITVPMSRQILMSPNNQAQVMLSPPTHHPMAGQVTQTTAKIKTETGYQTVPVLLQHTPATSMQLQKQMNPGNQIIQHPSIMHQNPNQTQYILTTNQQGQTVVLAQNPQPQMHQTVLVTQTPQQQGTSAKTIIILQQQPGSNTTQIQQGTIMNAVNSNSGTPQKVIMTTQQGQQVLVTQVPRPLQHHVIMNHPLNSGNQQQIVNQNNQLMSSNTQQIVIQTNPQLFGSNHQQQHIINQNPQQTISQVPVSVTSTMTQTPQILVHHQQPYQERKLIVDSSSLDKSTELKLSNHQQILNIQPQSHIILQQPIQQKSHSETQVQTTVNSQHLQQISQSIQQQLSQATQQQINQLVQQQQISVPVQQHQQISQSIQQQINQHIQQNITQSVQQQQTQLIQPQLNQPQPPITQFVQQQTTQQPVQQSQTPILNQTACSTQQRPNQNIIQNNKIQSQNVVQNPVPKPVVAPVIKHEPVVKVEIELFDNNWLWVCDWRGCPKRKFRSAMDVYVHACTVHCPDNLDAGADIYCQWGLGPNLCDNLPRKRFSLMTHLFDRHCTIESFKIAMQRRLATGNSVLPTQTQPVTIIKQPSPPSTTTETTSTTSSTSSKSSNAAMHAIKRHAHDYGTSKELLDENEGPVTKSIRLTAALILRNLVNYSSSAKRSLRYYEPHLAGVALSNVESSRTIAQVLYEMNETLPL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-