Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002740.1:18979927-18981829[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.06 28 8.0 1.3 1 17 138 154 138 159 0.87

2 8 0.0029 1.4 12.1 1.6 3 23 166 187 165 187 0.96

3 8 0.65 3e+02 4.7 1.5 3 23 204 224 203 224 0.93

4 8 1.7 8e+02 3.4 0.1 5 22 233 250 232 250 0.93

5 8 5.3e-05 0.024 17.6 0.8 2 23 340 361 339 361 0.97

6 8 0.00056 0.26 14.4 1.4 2 23 367 389 366 389 0.96

7 8 0.074 34 7.7 0.8 2 23 394 414 393 414 0.94

8 8 0.052 24 8.2 0.3 1 20 420 439 420 440 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.06	28	8.0	1.3	1	17	138	154	138	159	0.87
2	8	0.0029	1.4	12.1	1.6	3	23	166	187	165	187	0.96
3	8	0.65	3e+02	4.7	1.5	3	23	204	224	203	224	0.93
4	8	1.7	8e+02	3.4	0.1	5	22	233	250	232	250	0.93
5	8	5.3e-05	0.024	17.6	0.8	2	23	340	361	339	361	0.97
6	8	0.00056	0.26	14.4	1.4	2	23	367	389	366	389	0.96
7	8	0.074	34	7.7	0.8	2	23	394	414	393	414	0.94
8	8	0.052	24	8.2	0.3	1	20	420	439	420	440	0.91

Sequence Information

Coding Sequence: ATGAGGAAGTTCAAGGTGAAAATCAAAGGACAAGAATTCAAACAAGATGTTAAATCAATCTTTCTGTGTATGTTTTTTCCACATCGTCAGATATCCCAATCAATTGATACAGCATCTGAAATACTTGATAAATTTCAAGATTTCACAGAGCCTGTCTCATcctcaaatcaattaaaaactgAATCAAATGAAATTCAAAAGTCATCAACCAGAGATAAAGCCATACAATGCTCAGAAAATTGGAATAAGAAAGAATCTACTTCAGTAGAAACTCAATGTGATTTGGTTAAATTACTTGTTGTGAGCCACATGGATACAGTAAATCGAGATAATGATGAAGACGATCTATTCTTTTGTCCACCAGAACCGAAAACCTATAtagaaaaatgtaaagaaattgaaaataatttatatgaatgTTTGGATTGTgggaaaaaatgtgtaaaaaaagtCATGCTACGGCATGTCCACCTTCATACAGAGAAATCTGTACTTTGTCAATATTGTGGGAAAATCTGCATAGATCGGACAAGTTTATCAAATCACGAATTGAGAAGTCATCGAAATCCTACAACTTCGAGAAAAAAGACTTGTCGAGATGAGCGAATTTGCCCGTATTGTAATAAATATTCGAGATCGATAACAGCTCACCAAAATCATCTTAGTACCCATACTGGAGAGAGAAAAATCATATGCATCTGTGGAGAAGCATTTGGTAGCACTTATACTCTAGGTTATCATCGGAAAACAAAAGGTTGCGGTCTTCGAGAAGGAGAAACTGTAGAAGTTTTCGAAAAcgagaagaaagaagaaaacgaCGAAGACGAAGAGTGTTTCGaggaaaaagtaaaagttgaaaataaagaCGAAACATCGTCATTGCATGAAATTAAATCTGAAATTATCGAAGAGCCTGAAACAGGTGaaacatttatcataaaaatggAAGTTGAAAATGATGAAATACCGCAAGAAGAAGATCAAGATAAAAACGACAAGAAATCACCGATTGTATGGCCATGTAACACAtgcaataaaatcttaaaaagtgAATATATGTACAAGAGACATATAAGGACTCATGAAAAGTATCGATTAATGTGTTCCATATGCAACTGCTCCTATAATAGTCGACGAGTATTAAGGGCGCACATCCGAATTCAACATCTGAACAAAATTCGTTGtaatatttgtaatgaatttgtgaaaaaaagtcAATATAAAGCCCATGAGAGCCGCCATAATGCGTATAAACCGTTTGAATGCAGCATTTGCAAAAAGAATTTTCTAACAATGGGCGGACTCAGGACTCACAAGTTATGTAGTCATGATGGTAAAATTTATGATAAACGCGCATTCAATTGCTTCTTCTGTGGGTTcaatcgaaacaattttaaaacacACATGCAATCTAAATTCCATCAAGAAAAAGAAAGTATGTGGAAAAAATTGTATCAAATTGATTTATATCCTTGTAAAAAATGTAACGGCACAGCATATTTTGAAAACATTCTTGAACTTTGTCAACATTCAATGGAATCTCATAATTATAATTTGCATAAAAATATCGAGGAGTACTGCAAAAAGCTTGCGAATATATGGAATGATGTTAGCACACAAGAACAGGATGGTGAAAATAATAAAGTTTGTAGGACGGATACCGCTGATGGAGAAAATGATGGTATGGAAGAAGTATTGAACTGTGATaggaaaatttgtgttaaaaaagaaATGATCTCATCGGAGGAGGAGGAGAATGTTAAAAATGACTCGAATACgattaaaaatttaggtgttgcTGCACCTAATGCCGAACAATATATTGCTTTGAAGAAGGAAGAGATCGCTTAG
Protein Sequence: MRKFKVKIKGQEFKQDVKSIFLCMFFPHRQISQSIDTASEILDKFQDFTEPVSSSNQLKTESNEIQKSSTRDKAIQCSENWNKKESTSVETQCDLVKLLVVSHMDTVNRDNDEDDLFFCPPEPKTYIEKCKEIENNLYECLDCGKKCVKKVMLRHVHLHTEKSVLCQYCGKICIDRTSLSNHELRSHRNPTTSRKKTCRDERICPYCNKYSRSITAHQNHLSTHTGERKIICICGEAFGSTYTLGYHRKTKGCGLREGETVEVFENEKKEENDEDEECFEEKVKVENKDETSSLHEIKSEIIEEPETGETFIIKMEVENDEIPQEEDQDKNDKKSPIVWPCNTCNKILKSEYMYKRHIRTHEKYRLMCSICNCSYNSRRVLRAHIRIQHLNKIRCNICNEFVKKSQYKAHESRHNAYKPFECSICKKNFLTMGGLRTHKLCSHDGKIYDKRAFNCFFCGFNRNNFKTHMQSKFHQEKESMWKKLYQIDLYPCKKCNGTAYFENILELCQHSMESHNYNLHKNIEEYCKKLANIWNDVSTQEQDGENNKVCRTDTADGENDGMEEVLNCDRKICVKKEMISSEEEENVKNDSNTIKNLGVAAPNAEQYIALKKEEIA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -