Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002740.1:31602022-31604012[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.032 15 8.9 3.9 1 23 321 343 321 343 0.95

2 11 0.0091 4.2 10.6 2.9 1 23 349 371 349 371 0.93

3 11 0.0001 0.046 16.7 0.9 1 23 377 399 377 399 0.97

4 11 0.0014 0.67 13.1 3.8 2 23 406 427 405 427 0.96

5 11 0.00027 0.13 15.4 6.0 1 23 433 455 433 455 0.96

6 11 4.6e-07 0.00021 24.1 2.3 1 23 462 484 462 484 0.99

7 11 3.3e-06 0.0015 21.4 3.2 1 23 490 512 490 512 0.99

8 11 1.1e-05 0.0049 19.8 1.1 1 23 521 543 521 543 0.98

9 11 1.2e-06 0.00054 22.8 2.4 1 23 549 571 549 571 0.99

10 11 8.5e-06 0.0039 20.1 1.4 1 23 577 599 577 599 0.97

11 11 0.0034 1.6 11.9 0.4 1 23 605 627 605 627 0.93

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.032	15	8.9	3.9	1	23	321	343	321	343	0.95
2	11	0.0091	4.2	10.6	2.9	1	23	349	371	349	371	0.93
3	11	0.0001	0.046	16.7	0.9	1	23	377	399	377	399	0.97
4	11	0.0014	0.67	13.1	3.8	2	23	406	427	405	427	0.96
5	11	0.00027	0.13	15.4	6.0	1	23	433	455	433	455	0.96
6	11	4.6e-07	0.00021	24.1	2.3	1	23	462	484	462	484	0.99
7	11	3.3e-06	0.0015	21.4	3.2	1	23	490	512	490	512	0.99
8	11	1.1e-05	0.0049	19.8	1.1	1	23	521	543	521	543	0.98
9	11	1.2e-06	0.00054	22.8	2.4	1	23	549	571	549	571	0.99
10	11	8.5e-06	0.0039	20.1	1.4	1	23	577	599	577	599	0.97
11	11	0.0034	1.6	11.9	0.4	1	23	605	627	605	627	0.93

Sequence Information

Coding Sequence: ATGGATGCCCTTTGTCGCTGTTGCCTAGCAGAACACCCAAATATACACAACATTTTCGAAGATGGGATACTGGAAAAATTTCGATTATGTTCAAATGTTACAATTTCAAAAGATGATAGCCTACCGAAAATAGTTTGCGAAAATTGCttagaaaaaatggaaaattcttatGAATTTCGTCAAACTTGTGAAAAATCAGATTCCTTTTTAAGAGATTGGATAGAAAGGTTAGAAAAGAATGACTTTAGAAAAGAAGGTGAATCGAAAATTGAAAAACCAAATGATGACGAATGTGAGGGCAGCGaAACAGGAATATTAAAATCAACAGTTATTGGTAGTTTTTCTATGAAAAAAGAGGAGAATGTCATAGATTCATATGAAACCGACTTAGTAGAATGCTTAAGTACAGATGATGGGATGATTGATCTAAATGAGCAGACACCTAGTAGTGAAAATGCAACTGTAACTTTCATGTATATTGATGAAGTCgagaatatttcaacaattaatgatgttgcctttaaaattataaatgatatcgaagaagaagaagcagcagaagatgaaatagaaataaaacagTCCACCAGCCTTGAAAATTATACCAGTGAAAATGACTATGACTTaattcaggaagaagaagaagcacaagatgaaatagaaataaaatactCCACCAGCCTTGAAAATTATACCTGTGAAAATGACTATGATTTACTTCAGGAAGAAGATGAACATGCTAATTCTGATGAGTATATTGCTAAAGAAGACAACTTATGTAAAGAACATGCTAGCTCTGATGAAATTAATGTGAAAGTTAAAAAAGACTATGAAACGACAATAAAAAAGCAGAAAGGTGAACGAGTAGACAAATCAGTTGATTGCAGAATTTTTAGTGAAACATTCTCTTCCGAAGAAgctctaaaagaacacgaaaattCCCAAGCAATACATGGGCAATACCCTTGTGAACATTGTAGTAAAACATTTAAATGCATTCCATACTTACAAAATCATTTAGTTCGACATACTGGATTAAAAAAACACGAATGTACTTTTTGTAAATCAAGATTCTATGATTCATCTTCACTTAAAGCTCATGATCGAATTCACACTGGAGAAAAGTCTTATGAATGTGGAGCATGCAAAAAGTGTTTTGCACAAGATTCTCAACTAAAGGTTCATGCAAGAGAGCATAGTGATGAAAAACCAGTGGAATGTGATATATGTTTCAAAAATTTTTCGCACAATGGTCTTTTGCATACgcataaaaaattacatttatcagTAAGAGAACATATCTGTACCATCTGCCAGAAAAGATTTATATTATCACATCATTTAAAAATCCACATGGAACGTCATCAGAATCCAGAAATGAAATATCAGTGCAATGAATGCGGAAGGAGATATTCACATAGTACTGGTTTAGCTTATCACATGCGAACACATACAGGTGAGCGTCCATATAAATGTACGATATGTTCCAAGAATTATATATCTAGTTCTGCTCTTTGTACTCACTTAAGGACTCATTCTAAAGAGAAACTACCTCGAAAATTTGAATGTCCTCACTGTGAGAAACGTTATAACGGCAAAACTGAATTGCGTGTTCATTTACGAGCACATACAGGAGAACGACCCTTTgaatgtaaaatatgtaaaaaaagatTTGTACAAAACGTTCATATGGTTGTCCATATGCGCACCCATACGGGAGAGAGGCCCTATCCTTGTTCAATTTGTGGGAAATCTTTTGCGAGCTCATCAAACCATAAAGCCCACATGTTTAATCATACgggagaaaaaaacttttactgtaATATTTGTGGGAAAGGTTTTGCACAGACTTGGATTAGGAATGCGCACCAAAAAAGACACTCATCCAAAAGGGAAAGTGCTACAAACGACCAGAATAAAACATCGAGTTAA
Protein Sequence: MDALCRCCLAEHPNIHNIFEDGILEKFRLCSNVTISKDDSLPKIVCENCLEKMENSYEFRQTCEKSDSFLRDWIERLEKNDFRKEGESKIEKPNDDECEGSETGILKSTVIGSFSMKKEENVIDSYETDLVECLSTDDGMIDLNEQTPSSENATVTFMYIDEVENISTINDVAFKIINDIEEEEAAEDEIEIKQSTSLENYTSENDYDLIQEEEEAQDEIEIKYSTSLENYTCENDYDLLQEEDEHANSDEYIAKEDNLCKEHASSDEINVKVKKDYETTIKKQKGERVDKSVDCRIFSETFSSEEALKEHENSQAIHGQYPCEHCSKTFKCIPYLQNHLVRHTGLKKHECTFCKSRFYDSSSLKAHDRIHTGEKSYECGACKKCFAQDSQLKVHAREHSDEKPVECDICFKNFSHNGLLHTHKKLHLSVREHICTICQKRFILSHHLKIHMERHQNPEMKYQCNECGRRYSHSTGLAYHMRTHTGERPYKCTICSKNYISSSALCTHLRTHSKEKLPRKFECPHCEKRYNGKTELRVHLRAHTGERPFECKICKKRFVQNVHMVVHMRTHTGERPYPCSICGKSFASSSNHKAHMFNHTGEKNFYCNICGKGFAQTWIRNAHQKRHSSKRESATNDQNKTSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455365;
90% Identity: -
80% Identity: -