Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002743.1:9207641-9218732[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.011 5.2 10.3 7.4 1 21 184 204 184 206 0.96

2 11 3.9e-05 0.018 18.0 3.3 1 23 212 234 212 234 0.98

3 11 0.0024 1.1 12.4 4.6 1 23 240 263 240 263 0.95

4 11 0.0088 4.1 10.6 3.4 1 21 269 289 269 291 0.95

5 11 0.00013 0.059 16.4 1.9 1 23 297 319 297 319 0.99

6 11 1.4e-05 0.0066 19.4 1.2 1 23 325 347 325 347 0.98

7 11 0.00032 0.15 15.1 1.4 1 23 355 378 355 378 0.97

8 11 5e-05 0.023 17.7 2.4 2 23 385 406 384 406 0.97

9 11 0.00029 0.13 15.3 0.2 1 23 412 434 412 434 0.98

10 11 1.4e-06 0.00063 22.6 2.6 1 23 440 463 440 463 0.96

11 11 5.6e-08 2.6e-05 27.0 0.9 1 23 477 499 477 499 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.011	5.2	10.3	7.4	1	21	184	204	184	206	0.96
2	11	3.9e-05	0.018	18.0	3.3	1	23	212	234	212	234	0.98
3	11	0.0024	1.1	12.4	4.6	1	23	240	263	240	263	0.95
4	11	0.0088	4.1	10.6	3.4	1	21	269	289	269	291	0.95
5	11	0.00013	0.059	16.4	1.9	1	23	297	319	297	319	0.99
6	11	1.4e-05	0.0066	19.4	1.2	1	23	325	347	325	347	0.98
7	11	0.00032	0.15	15.1	1.4	1	23	355	378	355	378	0.97
8	11	5e-05	0.023	17.7	2.4	2	23	385	406	384	406	0.97
9	11	0.00029	0.13	15.3	0.2	1	23	412	434	412	434	0.98
10	11	1.4e-06	0.00063	22.6	2.6	1	23	440	463	440	463	0.96
11	11	5.6e-08	2.6e-05	27.0	0.9	1	23	477	499	477	499	0.96

Sequence Information

Coding Sequence: ATGGCGGCAAAAATAACAGAAGTGAAAGTGGAGAATCCTAATGACCTCCAGTCATATTTAGAATCATTTAATAGAGAAATCGATGAAGGCAATACTACAATACAAATTCTACAGGAGGATGAAAGCGGCGATGGCGATAACGATGAAGAAGACGGCGGAACATACTTTGTTGATCAATCaggaaattattattatcaaGCAACAAAAGAATCAGAACCAGTCCTAGCTAATGCATTGGATGAAATTGAAGATGGTTCTGAGGGAGAAGAGCAAGTGAATGAAACTGAAGAGTTTTTAGAAGATTCAGATAATGAAAGCGGAAAAGggaaaaaaacaattgcaattaGATCAAGGGAAAAATCCGGAGAGGTAAGCTACGTTCTTATAATGGATGAAGATACAAAAGCGGATACACAGAAAGAAGAGATTTATGATTTCGACGAGAAAGAAGAATCAGAAAGTCGTCAGGCTGCTGCGAAGAATATCGATAAATCGTTAAAGAAGTTGATAAAGCTTCTTCCTAAAAAGAGCAACTCAACAAATCAAGTGTTTCGATGCACTTATTGTCATTACTCAACCAACAAAAGATATCTATTAGCGAGGCATATGAAATGCCATTCAGAAGATCGTCCACATAAATGCTCGGTCTGTGAAAGAGGATTCAAAACTCTGGCATCACTCCATAATCACATTAATACGCACACCGGAAATAAGCCACATCACTGTAAATTTTGCGAAAGCTCATTTACAACCTCCGGAGAATTAGTTCGGCATGTAAGATATCGTCATACCCACGAGAAACCACACAAATGCTCAGAATGTGATTATGCGAGTGTGGAACTAAGTAAATTGAAGAGACATATTCGGTGCCATACTGGGGAACGTCCGTATCAGTGTCCACATTGCACATATGCATCCCCAGATACATTCAAACTAAAAAGACATTTAAGAATTCATACGGGGGAGAAGCCCTATGAATGTGATATTTGTCATGCTCGATTTACACAATCCAATTCCCTTAAAGCTCACAAGTTGATCCATAGCGTGGGTGAGAAGCCAGTTTTTCAATGCGAATTGTGCCCGACCACGTGTGGTAGAAAAACCGATCTTCGAATACACGTTCAAAAATTGCATACTTCAGATAAGCCGCTTAGATGTAAGAGGTGTGACAAAACTTTTCCAGATAGATATAGTTACAAAGTTCATTCAAAAACTCACGAAGGTGAGAAATGTTATAAGTGCGAACTCTGTCCGTACGCATCCATTTCGGCACGCCATCTGGAATCACACATTCTTATACATACAGACCAAAAACCATATGAATGTAATCACTGCGACCAAGCATTCCGGCAGAAACAGTTACTGAGGCGTCATATTAATTTGTACCACAACAGGGATTATGTTCCGCCTACGCCCAAGGAAAAAACACACGTTTGTCCCGATTGTGATCGGGCGTTTAGTCACAAAGGCAATTTAATCCGACATATGGCTTTGCATGATCCCGATTCTGGTGCTAAAGAACAGCAAGTCGCTTTAAAAGTGGGTCGTACAAAACGGATCCAAGTAATCGATGGTCAGGCTGTTGAAATCAGCCCCAGTATTGATGACGAAGATgaggacgacgacgacgatgaggaagaagaagatgaagaagatgTAATGCAAGAATCGGCCATTTATGATGATTCAAGCAATCAAACCAGTACTGAAATCAAGGAAGAGAAGGAGATTTCTATTGAAGATGATGGTGGTGATGGGCAGCAGTACATTGTGCTCGAAGTTATTCAGGTTGAATCAAAAACCGATGTTAGTATTGACAATGAAAACATGGAAGTTGGTGAAGATAGCTACATTAtggATTTACCCAGTGAGGTCATAAAGAATTTAACGGAGAGTAAGAAACTAAGAACAGAAGCAGAAAACATGCTTAGCGATGATAAGGATATGGAAAACTGCTTCGGATTTGAggaAGATGATGATCGGGATGAAGAGGATGAAGCAGAAGATAAATCAACTATAAAGCTAATCGAGATGCAGGAATGA
Protein Sequence: MAAKITEVKVENPNDLQSYLESFNREIDEGNTTIQILQEDESGDGDNDEEDGGTYFVDQSGNYYYQATKESEPVLANALDEIEDGSEGEEQVNETEEFLEDSDNESGKGKKTIAIRSREKSGEVSYVLIMDEDTKADTQKEEIYDFDEKEESESRQAAAKNIDKSLKKLIKLLPKKSNSTNQVFRCTYCHYSTNKRYLLARHMKCHSEDRPHKCSVCERGFKTLASLHNHINTHTGNKPHHCKFCESSFTTSGELVRHVRYRHTHEKPHKCSECDYASVELSKLKRHIRCHTGERPYQCPHCTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHSVGEKPVFQCELCPTTCGRKTDLRIHVQKLHTSDKPLRCKRCDKTFPDRYSYKVHSKTHEGEKCYKCELCPYASISARHLESHILIHTDQKPYECNHCDQAFRQKQLLRRHINLYHNRDYVPPTPKEKTHVCPDCDRAFSHKGNLIRHMALHDPDSGAKEQQVALKVGRTKRIQVIDGQAVEISPSIDDEDEDDDDDEEEEDEEDVMQESAIYDDSSNQTSTEIKEEKEISIEDDGGDGQQYIVLEVIQVESKTDVSIDNENMEVGEDSYIMDLPSEVIKNLTESKKLRTEAENMLSDDKDMENCFGFEEDDDRDEEDEAEDKSTIKLIEMQE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00453988;
90% Identity: iTF_00453988;
80% Identity: -