Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002740.1:31663787-31665611[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0013 0.62 13.2 0.1 2 23 238 259 237 259 0.96

2 12 0.021 9.5 9.4 9.2 1 23 265 287 265 287 0.98

3 12 0.0003 0.14 15.2 3.0 1 23 293 315 293 315 0.97

4 12 2e-06 0.00091 22.1 0.3 1 23 321 343 321 343 0.98

5 12 0.00065 0.3 14.2 2.5 2 23 350 371 349 371 0.96

6 12 0.00014 0.064 16.3 2.4 1 23 377 399 377 399 0.96

7 12 7.7e-06 0.0036 20.2 3.1 1 23 406 428 406 428 0.99

8 12 6.5e-06 0.003 20.5 7.5 1 23 434 456 434 456 0.99

9 12 4.5e-06 0.0021 21.0 2.3 1 23 465 487 465 487 0.99

10 12 0.00091 0.42 13.7 4.7 1 23 493 515 493 515 0.99

11 12 8.5e-06 0.0039 20.1 1.3 1 23 521 543 521 543 0.97

12 12 0.0056 2.6 11.2 0.3 1 23 549 571 549 571 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0013	0.62	13.2	0.1	2	23	238	259	237	259	0.96
2	12	0.021	9.5	9.4	9.2	1	23	265	287	265	287	0.98
3	12	0.0003	0.14	15.2	3.0	1	23	293	315	293	315	0.97
4	12	2e-06	0.00091	22.1	0.3	1	23	321	343	321	343	0.98
5	12	0.00065	0.3	14.2	2.5	2	23	350	371	349	371	0.96
6	12	0.00014	0.064	16.3	2.4	1	23	377	399	377	399	0.96
7	12	7.7e-06	0.0036	20.2	3.1	1	23	406	428	406	428	0.99
8	12	6.5e-06	0.003	20.5	7.5	1	23	434	456	434	456	0.99
9	12	4.5e-06	0.0021	21.0	2.3	1	23	465	487	465	487	0.99
10	12	0.00091	0.42	13.7	4.7	1	23	493	515	493	515	0.99
11	12	8.5e-06	0.0039	20.1	1.3	1	23	521	543	521	543	0.97
12	12	0.0056	2.6	11.2	0.3	1	23	549	571	549	571	0.90

Sequence Information

Coding Sequence: ATGGATGCCATATGTCGCTGTTGCCTAACAGAACACCCAAATATACACAACATCTTTGAAGATGGAATTTTGGAAAAACTTCGATTATGTTCAAATGTTACAATTTCAAAAGATGATAGCCTACCAAAAGTAGTTTGCgaaaattgcttaaaaaaaattgaaatttcttatgAATTTCGTCAGACTTGCGAAAGGTCAGATTCCTTTTTAAGAGATTGGATAGGAACACTTGAAAAGAACGAATCTGAAAAAGAAGGTGATGAATGTGAGGGCAGCGaaagagaaataataaaatcaacaGGTATTGGTGGTTTTTCTAAGAAAAATGAGGAGCATATCATAGATTTATATGAAACCGACTTAGTAGAATGCTTAGTAAGTACAGAAAATGATGAGATGATTGATCTAAATGAGCAGACAACTAGTGGTGATAATGCAGACATTTCGACTATAACCGTCACATATAGTGATGAAGACGAGAATAGTTCAACGATTGATAATGATGTggcatttaaaattataaatgataccgaaaaagaagaagaagaacaagaagaaatagAAATGAAGCACTCCACCGGCCTTGAAAATGACTATGATTTACTTCAGGAAGAAGATGAACTTTCTAATTCTGGTGAAATTAATCTGAAAGTTAAAAACTATGAAACGACAATAGAGAAGCAAAAAGTTAATCTAGTAGACAAATCAGTGGAATGCAGAATTTGTCGTGTAACATTCTCTTCCGAAGAAGCTCTAAGGGAACACGAAAATTCCCATACAATAAACGAACGATTCCATTGTGAACAttgtaataaaacatttaaatgtATTCCATACTTAACAAGACATTTACGTCGACACACTGGATTAAAAAAACACGAATGTACTTTTTGTAAATCAAGATTCTATGATTCATCTTCACTTAAAATTCATGTTCGAATTCACACTGGAGAAAAGCCTTATGAATGTGGAGAATGCAAAAAACGTTTTGCACAACGTGCTCAACTGAAGGTTCACGGAAGAGTTCATAGTGATGAAAAGCCATTGGAATGTGATGtatgttttaaaagattttcacacAATGGTCTTTTGTATACGcacaaaaaattacatttaccGGTAAAAGAACATATCTGTACTATCTGCCAGAAAGGATTTACTTTAACGAATCAATTAAAAACCCATATGGAACGGCATCAGAATCCAGAAATGAAATATCAGTGCAATGAATGCGGAAGGAGATTTTTACATAGTACCGCTTTAACTTATCACATGCGAACACATACTGGTGAGCGTCCATATAAATGTACGATATGTTCCAAAAATTTTATAACGAAAACTCATCTTTGTACTCATTTAAGGACTCATTCTAAAGAAAAACCACCTCCAAAATTTGAATGCCCCCACTGTGGGAAAGGTTGTTTCAGTAAAAGTGAATTGGGTGTTCATTTACGAACACATACAGGAGAGCGACCCTTTgaatgtaaaatatgtaaaagacGATTTTTACATAACGTTCATATGGTTGTCCATATGCGCACACATACGGGAGAGAGGCCCTATCCTTGTTCAGTTTGTGGGAAATCTTTTGCAAGCTTATCAACTCGTAAAAAACATATGTTTTATCATACGGGggaaaaaaactttttctgtaaCATTTGTGGGAAAGGTTTTGCCCAGGCTGGTATTAGGAATACGCACCAAAAAGGACATTCATCTAAAGCGAAAAGTGATTCAAACGACCAGAATGAAACGTCGAGTTAA
Protein Sequence: MDAICRCCLTEHPNIHNIFEDGILEKLRLCSNVTISKDDSLPKVVCENCLKKIEISYEFRQTCERSDSFLRDWIGTLEKNESEKEGDECEGSEREIIKSTGIGGFSKKNEEHIIDLYETDLVECLVSTENDEMIDLNEQTTSGDNADISTITVTYSDEDENSSTIDNDVAFKIINDTEKEEEEQEEIEMKHSTGLENDYDLLQEEDELSNSGEINLKVKNYETTIEKQKVNLVDKSVECRICRVTFSSEEALREHENSHTINERFHCEHCNKTFKCIPYLTRHLRRHTGLKKHECTFCKSRFYDSSSLKIHVRIHTGEKPYECGECKKRFAQRAQLKVHGRVHSDEKPLECDVCFKRFSHNGLLYTHKKLHLPVKEHICTICQKGFTLTNQLKTHMERHQNPEMKYQCNECGRRFLHSTALTYHMRTHTGERPYKCTICSKNFITKTHLCTHLRTHSKEKPPPKFECPHCGKGCFSKSELGVHLRTHTGERPFECKICKRRFLHNVHMVVHMRTHTGERPYPCSVCGKSFASLSTRKKHMFYHTGEKNFFCNICGKGFAQAGIRNTHQKGHSSKAKSDSNDQNETSS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00453984;
90% Identity: iTF_00453984;
80% Identity: -