Druf030779.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dioctria rufipes
Gene Symbol
ECU03_0790
Assembly
GCA_963924295.1
Location
OZ002740.1:238268042-238290563[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 16 0.042 20 8.5 3.5 3 19 272 288 270 291 0.93
2 16 0.04 19 8.5 2.5 2 23 302 323 301 323 0.90
3 16 0.0045 2.1 11.5 0.1 3 23 332 353 331 353 0.95
4 16 0.00041 0.19 14.8 1.1 1 23 359 381 359 381 0.97
5 16 0.00076 0.35 14.0 0.9 1 23 387 410 387 410 0.97
6 16 4.3e-06 0.002 21.0 1.4 1 23 415 437 415 437 0.98
7 16 0.13 62 6.9 0.1 2 23 447 468 446 468 0.96
8 16 0.036 17 8.7 1.7 1 23 486 508 486 508 0.97
9 16 0.0022 1 12.5 0.2 1 23 513 535 513 535 0.95
10 16 4.1e-05 0.019 18.0 0.3 1 23 540 563 540 563 0.97
11 16 0.00052 0.24 14.5 0.6 1 23 568 591 568 591 0.95
12 16 2.4e-05 0.011 18.7 0.8 1 23 594 617 594 617 0.97
13 16 5 2.3e+03 1.9 4.0 1 23 623 646 623 646 0.93
14 16 0.00021 0.099 15.7 0.1 1 23 652 674 652 674 0.98
15 16 5.3e-07 0.00024 23.9 0.6 1 23 680 702 680 702 0.99
16 16 0.075 35 7.7 0.2 1 23 708 733 708 733 0.96

Sequence Information

Coding Sequence
ATGAAAGAACCCTTCCAATTATTATTTGATGAAACGGGTGTCGATTTAGAACTTACGAAATTGTTATCAACTTGTTTTAGTTTAGATGTTaaagaaaaccaaaataaaattcaagCTCTTTGCGAGGATTGTTTAAATCAGTTGATTGAGGCTTttgatattatacaaaaaaattcgcaAGAGGAACCAAATCTAAAACCATGCACTTCCGCCCGCAACATTTTGAATGTTTctgtaaaaaaagaagaagatgaacATGAAGAATCACTACAGTTTGAAAATCTAAGTGTATCTGAGGTACAGTTAAATGAAGTTCCAGGTGAATACAAAAAGGAGATTCTCGATTGGAAAGAAATAATATATGACCAAGACTATGAATCGGATAATTCGAAGAAATCTGAAAAAATTTTGGaggaaaatgaaagttttgaacaAACCGTTTTGGAACAAAGCGAACTGAAGCAGACATCTGAAAGTCAGAAAATAGCCAATGATTCAGAAGAGTTTGAGCACGTTGATTATTTAGATGAATATGATGAGAAAATTGACTTCAAGGAGTATAAATCTAAAGTCTTGCGTAGCAAgtttttagatattatttttcCAGAATATATTAATTGTCGGATTTGTTCGGACACTTTAAATAAACATGTGGATATAATAGTGCACACACAAAAGGAGCACTGCGTGGATGACTTTGCATATCCATGTGTTATAGATGAAAGTTGCGAGCCACTTGAATCAGCAACGGACTTATCCTTCCATTTAGTTTTTAAGCATTACGATTTAGAAGCTTTAGTCATTTATTCACATTGCCCAGAATGTAATAGACGTTTCAATGACTACATGTCCTATAATAAGCATTCTTGCTATCGAGGAGATAAAATATCTCGCAGTGCAATAGAATGTGAAATATGCAGCAAaacatttaaatcaaataaaagGTACCGCTTTCATCAACAATTCCATCAAGAAAAACGACGTCCAAAAGCTTGCCTTATATGTGATAAACTCTTTCGGGATGAAGATGAATTTTATGAGCACATTATGTATAGTCATGAAAAAGATCTTGGTTTTGTTTGTGTAAGTTGCGATTGTTCATTTACATCAGTCGAAAACTTGAAAAATCATGAGAATATTCACAAAATATACCGACCGTATCGCTGCAAAGTTTGTAATAAATCTTATTTATACAATCAACTTTTGAATGATCATATGcTATCAATTCATGGAAAGAGCTTATTCGAATGTCATATATGTGGCAAGAGCTTGGTGAAGAAAACTCTTCTAAATAAACATATTTTATCCCATAATAAGCCCCAACCGGCTGAGGTTACGAGTTGCAGTATATGTGGCTTAATTACCAATGAAGAAAGTCAAGCAGAAAACCATTTGAAAGAGCATGAAGAAAGTGATGATGAACCAAAAACTAAAACTGAAGTTCTGGAAATAGCGTATTGCTGCGAGTATTGTGAGTTGGCATATAATTCCATTGAAAACATGTTTGATCATCGaaaattgcacaacaaaaagGAATATTATTGCGATATGTGTCCTTTGTCTTATGATcaGGAACTACTTAAAAATCACATGGATAATGCACATAAAGGTGCGGCTTATGAGTGCGAGTTTTGTGATAAAACGTTTGGTACGCGAATGGCCTTAGCTGTACACATTTCTAGGCGACATAACACCAGTCGTTTTCGATGTGAATTCTGCGATCAGAGTTATGCTACTGAAACACTTTTAGAAAAGCACAAAGATAGTGTTCATAATACTTTTGCATGCGAAATATGtggaaaagttttaaaaaatttgaaaaattatcacGTTCATCAGAGAATGGTtcatcaaaaagaaaaaagatttttctgCAAATTTTGCAACAGAGGCTACTTCAATAATTGTGATAAAATTGATCATGAGAAATcggtacatgaaaaaataaaaaaatataaatgtgacTTGTGTCCATATGCAGCAGTGTATAAAGAGTCGCTAAGAATTCATATGAGAGCACACCGAAATGAAACTCCTTATGTCTGTTCACTGTGCGGGAAGGGATTTCGTCGAAGTTACGCATTAGAACTGCACACAAGACGCCATTATGATATCAGAGAttttatatgcCCCTATACAGGATGTAAGAGCTCCTATCCTAATCAAGGAATTTTAAATTCCCATATACGCTCAAAGCATCAAAACTCTGaTAATATGCCAATTAAACGAAAAAACGCTACAGATGTTGTCATCCGCTCTCAATTTTTGATACCGCCAGCTGATATTTtcattgatgatgatgatggcttGGATGATGGTGTAATAGGAGAGCCACAGAGTAAAAAGATGAAGACTGAGGAAGATGAAAATAGTTTTGACGATCCTACGCTTTATATTAGTCAGGAATCAGATTCAGAGCCCGCTGTAATTGTACTGAAAAATGAATCGGATCACGATTACATTGTTCGTCTAGATGAAAACAAGATCTATGGAAATATTATTCAAGAATATAAGGTAGAAGATGAATACACTGCATAA
Protein Sequence
MKEPFQLLFDETGVDLELTKLLSTCFSLDVKENQNKIQALCEDCLNQLIEAFDIIQKNSQEEPNLKPCTSARNILNVSVKKEEDEHEESLQFENLSVSEVQLNEVPGEYKKEILDWKEIIYDQDYESDNSKKSEKILEENESFEQTVLEQSELKQTSESQKIANDSEEFEHVDYLDEYDEKIDFKEYKSKVLRSKFLDIIFPEYINCRICSDTLNKHVDIIVHTQKEHCVDDFAYPCVIDESCEPLESATDLSFHLVFKHYDLEALVIYSHCPECNRRFNDYMSYNKHSCYRGDKISRSAIECEICSKTFKSNKRYRFHQQFHQEKRRPKACLICDKLFRDEDEFYEHIMYSHEKDLGFVCVSCDCSFTSVENLKNHENIHKIYRPYRCKVCNKSYLYNQLLNDHMLSIHGKSLFECHICGKSLVKKTLLNKHILSHNKPQPAEVTSCSICGLITNEESQAENHLKEHEESDDEPKTKTEVLEIAYCCEYCELAYNSIENMFDHRKLHNKKEYYCDMCPLSYDQELLKNHMDNAHKGAAYECEFCDKTFGTRMALAVHISRRHNTSRFRCEFCDQSYATETLLEKHKDSVHNTFACEICGKVLKNLKNYHVHQRMVHQKEKRFFCKFCNRGYFNNCDKIDHEKSVHEKIKKYKCDLCPYAAVYKESLRIHMRAHRNETPYVCSLCGKGFRRSYALELHTRRHYDIRDFICPYTGCKSSYPNQGILNSHIRSKHQNSDNMPIKRKNATDVVIRSQFLIPPADIFIDDDDGLDDGVIGEPQSKKMKTEEDENSFDDPTLYISQESDSEPAVIVLKNESDHDYIVRLDENKIYGNIIQEYKVEDEYTA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
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90% Identity
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80% Identity
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