Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002742.1:174590110-174593843[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 6.2e-05 0.029 17.4 0.8 1 23 157 179 157 179 0.97

2 15 0.00016 0.075 16.1 0.6 1 23 185 207 185 207 0.97

3 15 0.0003 0.14 15.2 0.1 1 23 316 338 316 338 0.98

4 15 0.024 11 9.3 0.7 1 23 344 366 344 367 0.96

5 15 1.8e-05 0.0086 19.0 3.7 1 23 394 416 394 416 0.98

6 15 0.0045 2.1 11.5 0.2 1 23 428 450 428 450 0.94

7 15 0.36 1.7e+02 5.5 0.2 1 23 456 479 456 479 0.85

8 15 0.36 1.7e+02 5.5 0.8 3 19 488 504 487 505 0.94

9 15 8.6e-05 0.04 16.9 5.9 1 23 514 536 514 536 0.96

10 15 0.021 9.9 9.4 0.6 2 23 542 563 541 563 0.96

11 15 9.6e-06 0.0044 19.9 0.3 1 23 571 593 571 593 0.98

12 15 0.0038 1.7 11.8 0.2 3 23 601 621 599 621 0.97

13 15 4.5e-05 0.021 17.8 0.5 1 23 627 649 627 650 0.95

14 15 0.11 49 7.2 0.1 1 23 660 682 660 682 0.97

15 15 0.0051 2.3 11.4 0.0 1 20 1068 1087 1068 1090 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	6.2e-05	0.029	17.4	0.8	1	23	157	179	157	179	0.97
2	15	0.00016	0.075	16.1	0.6	1	23	185	207	185	207	0.97
3	15	0.0003	0.14	15.2	0.1	1	23	316	338	316	338	0.98
4	15	0.024	11	9.3	0.7	1	23	344	366	344	367	0.96
5	15	1.8e-05	0.0086	19.0	3.7	1	23	394	416	394	416	0.98
6	15	0.0045	2.1	11.5	0.2	1	23	428	450	428	450	0.94
7	15	0.36	1.7e+02	5.5	0.2	1	23	456	479	456	479	0.85
8	15	0.36	1.7e+02	5.5	0.8	3	19	488	504	487	505	0.94
9	15	8.6e-05	0.04	16.9	5.9	1	23	514	536	514	536	0.96
10	15	0.021	9.9	9.4	0.6	2	23	542	563	541	563	0.96
11	15	9.6e-06	0.0044	19.9	0.3	1	23	571	593	571	593	0.98
12	15	0.0038	1.7	11.8	0.2	3	23	601	621	599	621	0.97
13	15	4.5e-05	0.021	17.8	0.5	1	23	627	649	627	650	0.95
14	15	0.11	49	7.2	0.1	1	23	660	682	660	682	0.97
15	15	0.0051	2.3	11.4	0.0	1	20	1068	1087	1068	1090	0.94

Sequence Information

Coding Sequence: ATGGATAATCGGGGGTACCAAATACAGTGGGTTCAAGAAATCGATCACGATAGTCAAATCGTGAACGAAGAGGTCATTACAATAGATCCACAAGCAGAAGATGAGGAAGGACCTGAACAAggatattttgttcaagaaatgtCTTCAATCCCATCAAGTTTGGACCAAATTGCAGccgaaaatttaatttacatgGCTCAAGATGGGCAAGTTACGACCATGGAAGGTTTAATTGAGCATAATCGCGAAGATAGCGAAACACAAAATTACAATGAACAACAATACTTCGAGTGTCAGGTTACTGAAGAAGTAATTACTGATGATTGGGTACAGCAACAGGGTGAAGAAAGAGTGGAAATACATGTGGATCAGCTGTGCGGATCTGGGGGTGGTGGAGATGGTCAGTTGGTTGAGGAACTGGATGTGCCCTTGCCTACAGATCAAGACGAATATACTGCTCTTCGTCCATATCCTTGCGATTTTTGTAGTCGGCGCTTTCGTAAAAAGGTTAGTTTAATGAACCATATGATTGCACATCAGAATGATCGTCCGCACGTTTGCAATTTATGCGGAGCACGTTATGTTCGACGTAATGATCTTTTGAATCATTTGAAAATACACGCTCACGTTCCAGATGATAAAATGGACGACATCGATGATAGTTGTAAGTTTTGTTTCTACCCGCTTGGACAATTTAGCTATTTAGCAGATTTCTTTTCAGATTTTAACGACCATATCGAGGCAAGACCGCCTCGTCAAAGTAATTACTATGATCATGATAGCTATGAAGAAAAGCCGAAAACAAAGTCAAGAGGACGTGGAAGAAAACCCAAAATAAAAGAGGAAGTACGTTACTCTGATCATGATCAATTTGTGGATGAAGTTATTGAGGAGGAGCAGAGCCATAGCATCCAACGGTATCCTATTATAGATCCCAAGAAACCTTTTGTTTGTCAACAGTGCGGAGTTGCGTTTGCACGAGAAAAAGCTTTATTGTCTCATTCTAGGatccATGGAAGTGATTCTCCTTATGAATGTGGCAATTGTAGCGAAATGTTTTGGGATATGAACTCTTTAAATGAACACCAAAAGATTCACCACTTTGAAGCGAGTAATTCTGAATATGAACCGGAAAATGACGAAGAAACAGAATCAGACAATGATTCTAAGTATGGAGATTTTTATTGCAGTGTTTGTGGAATGTCATTTCATAGGCAAGATTTATTGAAAAGACACTCTAAAACACACGTTAAACGGGAAATTGCTGATGGAGACTCCCGGCATTGCTGTAACGTCTGCGGAGAAACCTTTGCTGAAGCTTTGGATTTACTGGCTCACGCTGAGATTCATGCTAGATTTCAACCTTTTAAgTGTATGTTATGTGGTGAATCATTTCTGGAAGAAGCAACAATCAAAAAGCATTTAACAAATGTTCATTCATCACAAATGAATGCAAATTCATGTAGGTTGTGTGGAAAGCAATGCAAGGATGGTAGAGCTTTAATGAAACATGCCTGGGACCATTCTAGAGAGAAGAACCATTCATGCTCGAAATGTGGAAAAACATTTCATAATAAAGCTAGACTTAAGCGTCATATGGTATCACACCGAAATAAGTCGGTGACATGTGATGTTTGCCAGGAAGAATTTCCGGATGGCCGTACATTAATGAATCATAGACATTCACACACAAACTCCTCTGGTCGTTTGTTCCCTTGCTACGAGTGTGGTAAAACTTTTGGTTCAAGAAGCTCACAACAAATTCACATCCGTATACATACTGGAGAACGTCCTTATGGTTGCCGTTTTTGTTGGAAAGCATTTGCAGATGGTGGTACATTGAGAAAGCATGAACGCATTCATACagGCGAAAAACCGTATGCTTGTTCTGTTTGTCCTAGAGCATTTAACCAAAGAGTGGTTCTAAGGGAACACATTAGATCACATCATTCTGCTATAGATAGCAAGAAAGGAACGTACTATTGCCCCGTTTGTACTGATGTATTACCTTCATCCGTAGATCTTATCCAACATTTGATTCATCACAGCGATATGAATACAGCGATGCAAAGACAACCAATTactGGACCGCGCAAATATAAGCGCCGCAGAAAATTAAAACCTCACGAAATAGAACGACTCAGAAATGAAAAGTCAAACAACAGCGATATAGAGTACTCCGACTTAGATATAAGCACTGTTGACGATCTTCTCGGaatcagtaataaaaataaaCGTGTGAGTCGTCCGTCAAATTCTTCAACTTCAGCTATGCACGCACCAATAACATCTCGAAGTAGAAAGTTCTCAGGAAATTCTGATAAAGTAACCACCAATTGGCAAAATAAACTAATGTCGTCATCTACAGATGACTCCTATAATACAGTTTTCCAAAATTTGGAGAACGCTCTTAATAATATTGATTCGTTGGTTGTAAGTAATAGCACAAGTACATCACCAGCGGTTGTTGTACCGAGGGCTGCAAAACAAGCGACGAAGAGGAAGGCCAATAGAATGGAAGTGGTTGATAAACCATCGAGACCAAAAATGATACATACACAAAAAACTCGCGTTGCTGCCGAGGATGGTAAACGCAAGACGAAAACTTTAATAACAAGAACAGATCCAATGGAAATTGATCATCAAGTTTTCCAAAACTTCGATCGAACAACTAAGGGTAGAAGGAAACGTGATAACAGTACAACAAGCGTAAACAGCGACTATGATTTAATTCTCCAAGAACAAACACAAATTCAAACTAGTCCAGTAATTATAAAAGAGGAGCAAGCAATACATCGCGGCGAGATCTTTGATGCTCAATTGCTTTTGGAAGCGGCATCAATGCGCAAAGAAATGGACAAATACAATCCAGATGTAGTGAATGATTTAGAGGAGATCTTACGATCACCAATCAAGAAATCATCTCCCCCAGAGACTTCACGACACACAATTTCACAATATCATTCTGAAATCAGTGAAGAAACACCACATGAAGATCTGAGACGATCTAGTCGTATAAAACGATTAACGCCGAATCGGAAATATTTGGAGTTTGAGACAACTACTCTGAAACCATCGTTCGTCAATAAACCTGTAACCAATGTAAAAATCAAACAAGAGAAATCagataaaatagaaataaaaattgaaaagacTGAAGAAACTTTAAAAGTGCAATCACAGGgaataaaaagtgaatatttccaGTGCGAAATGTGTTCGGCTGTTTTTCCAGATCGTGCCCAATTACTCGTTCATGTACCAATTCACATATAG
Protein Sequence: MDNRGYQIQWVQEIDHDSQIVNEEVITIDPQAEDEEGPEQGYFVQEMSSIPSSLDQIAAENLIYMAQDGQVTTMEGLIEHNREDSETQNYNEQQYFECQVTEEVITDDWVQQQGEERVEIHVDQLCGSGGGGDGQLVEELDVPLPTDQDEYTALRPYPCDFCSRRFRKKVSLMNHMIAHQNDRPHVCNLCGARYVRRNDLLNHLKIHAHVPDDKMDDIDDSCKFCFYPLGQFSYLADFFSDFNDHIEARPPRQSNYYDHDSYEEKPKTKSRGRGRKPKIKEEVRYSDHDQFVDEVIEEEQSHSIQRYPIIDPKKPFVCQQCGVAFAREKALLSHSRIHGSDSPYECGNCSEMFWDMNSLNEHQKIHHFEASNSEYEPENDEETESDNDSKYGDFYCSVCGMSFHRQDLLKRHSKTHVKREIADGDSRHCCNVCGETFAEALDLLAHAEIHARFQPFKCMLCGESFLEEATIKKHLTNVHSSQMNANSCRLCGKQCKDGRALMKHAWDHSREKNHSCSKCGKTFHNKARLKRHMVSHRNKSVTCDVCQEEFPDGRTLMNHRHSHTNSSGRLFPCYECGKTFGSRSSQQIHIRIHTGERPYGCRFCWKAFADGGTLRKHERIHTGEKPYACSVCPRAFNQRVVLREHIRSHHSAIDSKKGTYYCPVCTDVLPSSVDLIQHLIHHSDMNTAMQRQPITGPRKYKRRRKLKPHEIERLRNEKSNNSDIEYSDLDISTVDDLLGISNKNKRVSRPSNSSTSAMHAPITSRSRKFSGNSDKVTTNWQNKLMSSSTDDSYNTVFQNLENALNNIDSLVVSNSTSTSPAVVVPRAAKQATKRKANRMEVVDKPSRPKMIHTQKTRVAAEDGKRKTKTLITRTDPMEIDHQVFQNFDRTTKGRRKRDNSTTSVNSDYDLILQEQTQIQTSPVIIKEEQAIHRGEIFDAQLLLEAASMRKEMDKYNPDVVNDLEEILRSPIKKSSPPETSRHTISQYHSEISEETPHEDLRRSSRIKRLTPNRKYLEFETTTLKPSFVNKPVTNVKIKQEKSDKIEIKIEKTEETLKVQSQGIKSEYFQCEMCSAVFPDRAQLLVHVPIHI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00424826;
90% Identity: iTF_00453982;
80% Identity: -