Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002744.1:28576659-28591462[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 1.1 4.9e+02 4.1 1.1 8 23 273 288 272 288 0.92

2 14 1.3e-05 0.006 19.5 1.7 2 23 427 449 426 449 0.96

3 14 3.5e-05 0.016 18.2 2.3 2 23 549 570 548 570 0.96

4 14 0.00017 0.078 16.0 0.2 2 23 610 632 609 632 0.96

5 14 0.029 13 9.0 0.1 2 21 649 668 648 669 0.92

6 14 5.6e-06 0.0026 20.7 2.7 1 23 677 699 677 699 0.98

7 14 0.076 35 7.7 2.4 3 23 707 728 705 728 0.91

8 14 0.0015 0.69 13.0 2.2 1 23 868 891 868 891 0.97

9 14 0.00023 0.11 15.6 2.1 2 23 911 932 910 932 0.96

10 14 0.0001 0.048 16.7 0.1 2 23 968 990 967 990 0.95

11 14 1.2e-05 0.0056 19.6 2.0 2 23 1006 1027 1005 1027 0.97

12 14 7.9e-05 0.037 17.1 3.3 1 23 1034 1056 1034 1056 0.97

13 14 0.00089 0.41 13.7 1.4 3 23 1064 1084 1062 1084 0.94

14 14 0.0002 0.094 15.8 1.0 1 23 1093 1115 1093 1115 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	1.1	4.9e+02	4.1	1.1	8	23	273	288	272	288	0.92
2	14	1.3e-05	0.006	19.5	1.7	2	23	427	449	426	449	0.96
3	14	3.5e-05	0.016	18.2	2.3	2	23	549	570	548	570	0.96
4	14	0.00017	0.078	16.0	0.2	2	23	610	632	609	632	0.96
5	14	0.029	13	9.0	0.1	2	21	649	668	648	669	0.92
6	14	5.6e-06	0.0026	20.7	2.7	1	23	677	699	677	699	0.98
7	14	0.076	35	7.7	2.4	3	23	707	728	705	728	0.91
8	14	0.0015	0.69	13.0	2.2	1	23	868	891	868	891	0.97
9	14	0.00023	0.11	15.6	2.1	2	23	911	932	910	932	0.96
10	14	0.0001	0.048	16.7	0.1	2	23	968	990	967	990	0.95
11	14	1.2e-05	0.0056	19.6	2.0	2	23	1006	1027	1005	1027	0.97
12	14	7.9e-05	0.037	17.1	3.3	1	23	1034	1056	1034	1056	0.97
13	14	0.00089	0.41	13.7	1.4	3	23	1064	1084	1062	1084	0.94
14	14	0.0002	0.094	15.8	1.0	1	23	1093	1115	1093	1115	0.97

Sequence Information

Coding Sequence: ATGGATGGATTAGGCAAGAATAATTCGGTTGATATCATTAAAGAGGAACCAAAAGAtggaaatatatatacaaaagaagATAACAGGAAAGTGGAGGAAGACAATAATGCTATAAAGTTTTTAAAGAGTGAAGACATGAAGAACGAAGACAAAAAACTGAGAGAAACAGGCAGCACTTTAGAAATGCTTGGACAACAACAAGCCGTTGACGAAACTATGATAGAAAAAGgCGTTACCAAAACAGAGGACCCATCAATCATGGATTACGAAGAAGGGATCAGTTGTTTTGTTGTCACTGCAGCTGCAGAATTTCATGTAGTTCCATTcaggcagaataaaaaaaattatccgtGCATAGAAACTGTTATCGAAGAAATCAAAGAACATTTTGAATGTGAAGCAAATGAAGATATTCTACAGGAGAACAAGTCAGCCGCCTGTGAGGATATTATCGAAATGAAGAATAATAACACAGACAACGAAGAAGAAATGAAGGCTGTCATCATGTTAGTAGATGATGAGGACGAAGAAAATACACCTTTATCTACACTTAATTCCTCgactgaaaattttgaaaataaggaGATAAAAAAGGAGAGCATTTCCAATTATGATTCTTGCAATGCAGCTGATACTAATACTTCTCTATTCGAAGGAGTTCGCTATGATCCTAGTAATTGTCGCAAGATTGATTTTAGTagaacaaattttcttaaaactcTACAGGAGTATCACGATTTGCAACAATCTAAATCAAACAATACGAAATCAAAAACGAAAGTGTGGAGTGGTCTCTGTTGTCGTCCTCTTAGTAAGCAGTCTTATAAGCATCTAAAATCTTTAGAGACCCATATGAAAGGCCATGGTAAGTGGAACTTGCAGGAGAAGGAAGACGAAGATAAAATACCTTTATCTACACCTAAGCCTTTCTCCtctgaaaaacttcaaaaaaatgagacaaaaaaGGATAAGGACGAAGAAAAAATACCTTTATCTACACCTAAGCCTATCTCCACTGATAGACTTCATAAAAATGAGGCAAAAAAGGATAAGGAGGACGAAGAAACAATACCTTTATCTACACCAAAGCCTTTCTCCACTGAAAGACTTCAAAAAAAGGAGACAAAAAAGGATAAGGAGGACGAAGCAACAATACCTTTATCTACACCTAAGCCTTTCTCCACTGAAAGACTTCAAAAAAAGGAGACAAAAGAGGGTAACATTTCCGATAATGAATCTTGCAATGCAGATGGTATTGATAAAACATGGAGTACTCTCATGTGTCCTCTTTGTCAGCGATCTTATAAGCATCCAAAATCTTTAGaaaatcatatgaaaaaaatacatgGTAAGGGGAATTTTCAGGTGGAGAAGAAGGACAAAGAAAAAACACGATTATCTACACGTAAATCTACCTATCTTGAAAATAAGGACATAAAAGAGGATAAAATTTCCAATAGTAAGTATTGCAACCCAACTGGTATTGATATTTCTACTCTTTTCGAAGGAATTCATTATGAGTCTGGTCGTTCTCCCGAGGTTGATAGAAGAATCAATTTTCTTGAGATTCTCAAGAACTATCACAATTCTAATAAACCTAAAACAAACAAtacaaaaacaagaacaaaaatatGGGGTGGTCTCTATTGTTCTATTTGTAAGCGATCTTATAAGCATCAAAAAGCTTTAGAAAATCATATTAACAGCCatgAACCTGATGGAGATCTGATCCTCAAAAGTCACAAAAGTGTATGCTTTGGGCAATACTTTAAAGATAAGGAAGAAGCTGATAATCATTATAATAGATCTGTACATAGTGAAATTAATAAATGCCCGACATGCTACAAAATTTATACTGATCCTGATAAATTGGAAGCTCACAAACGATATGCCCACAAACAGAATATTCAAATTCCGACAGAGACGAATGATGACAAATTCAGCGTTTGTAAgatatgtgcaaaaaaatttcccAATGAAACTGCATTGTCCGATCATGAAAAATCTGGCTGTGCTACATCGCCTATATTCAAATGTGATGAATGTGGTAAGATCTTCCGACACGCTGTATCATTTAAACGTCATCGAACTGTACACACTGGAGAATTGCCGCATTTATGTAATTTCTGTGGGAAAGCATTTCGAACatatagaatcgttaaaagtCACGAAAGAAGAGAACATTGTAAAGGGAAACTATTTAAGTGTAGTAGTGAAGATATAAGGAATAAAGACAAAGAGCCGAGAAAAACAGTCAGCACTATAGAAATGCTTGCACATCAACAGACTGTTGATGAAACGATAATAGAAAAAGgCGTCACCAACATAATGGACCCATCAATAATGGATTTCGAAGAAAATATCAGTTGTTTTGTTGTCACTGCTGCTGCAGAATTTCATGTAGTCCCATTCGGGCAGAATAAAAACAATGATTCGTGCATAGAAACTGTTATCAATGAACATATTAAATCTGAAGcaaatgaagaaaatacatctttatCTACACATAATTTTTCGACTGAAAAACTTGAAAATGAGAGTTTTTCAAGTGATGAGTCTTGCAATGCAGATGATACTGATACTCCTTTCAAAGAAGTTCGTTATGAGTGTGGTCATTGTCCCAGGGTTTATTTTAGAAGAATATCTTTTCTTAAGCATCTCAAGAACGATCATAATTCGCCACATGATTATCAGCTTCTTCAATCAAAACGAATAACATGGAGTGGTCTCTATTGTGCTCTTTGTAAGAGATCTTATAAACATCCAAAATCTTTAGCGAATCATATTAAGAGACATGGACCTGATGGAGAGCTGATCCAAATGAATGCATGCTTTGGGCAATACTTTAAAAACAAGGAAGAAGCTGATAATCATAATAGATCTATacataatgaaattattaaatgcGAGATATGCGACAAAATATATGCTGATTATGATAAATTAGAAGCTCATCAACAATATGCCCACAAGCAGATTCCGACTGAGGCGAATGATGAAAAACGCTACTTCAGCGTTTGtcagaaatgtggaaaaaaatttACCAATAAAACCGCATTGTCCGATCATAAGAGATCTCACTGTGGTAGATCACCTCTATACAAATGTGATGAATGTGATACGACCTTCCGCAGTCATCAATCATTGAAAATTCATAAAACTATCCACACTGGAGAATTACCGCATTTATGTAATTTCTGTGGGAAAGCATTTCGGACATATGGACAAGTTAGGGTGCACGAAAAAGAACATAAtgaagaaaaagacaaaaaatcaTTTAAGTGTAGTATCTGTGCAAGAGCATTTGTCCACCAGCAGAGTCTAATTAATCATCTTACATTGCATAAAGTGTGA
Protein Sequence: MDGLGKNNSVDIIKEEPKDGNIYTKEDNRKVEEDNNAIKFLKSEDMKNEDKKLRETGSTLEMLGQQQAVDETMIEKGVTKTEDPSIMDYEEGISCFVVTAAAEFHVVPFRQNKKNYPCIETVIEEIKEHFECEANEDILQENKSAACEDIIEMKNNNTDNEEEMKAVIMLVDDEDEENTPLSTLNSSTENFENKEIKKESISNYDSCNAADTNTSLFEGVRYDPSNCRKIDFSRTNFLKTLQEYHDLQQSKSNNTKSKTKVWSGLCCRPLSKQSYKHLKSLETHMKGHGKWNLQEKEDEDKIPLSTPKPFSSEKLQKNETKKDKDEEKIPLSTPKPISTDRLHKNEAKKDKEDEETIPLSTPKPFSTERLQKKETKKDKEDEATIPLSTPKPFSTERLQKKETKEGNISDNESCNADGIDKTWSTLMCPLCQRSYKHPKSLENHMKKIHGKGNFQVEKKDKEKTRLSTRKSTYLENKDIKEDKISNSKYCNPTGIDISTLFEGIHYESGRSPEVDRRINFLEILKNYHNSNKPKTNNTKTRTKIWGGLYCSICKRSYKHQKALENHINSHEPDGDLILKSHKSVCFGQYFKDKEEADNHYNRSVHSEINKCPTCYKIYTDPDKLEAHKRYAHKQNIQIPTETNDDKFSVCKICAKKFPNETALSDHEKSGCATSPIFKCDECGKIFRHAVSFKRHRTVHTGELPHLCNFCGKAFRTYRIVKSHERREHCKGKLFKCSSEDIRNKDKEPRKTVSTIEMLAHQQTVDETIIEKGVTNIMDPSIMDFEENISCFVVTAAAEFHVVPFGQNKNNDSCIETVINEHIKSEANEENTSLSTHNFSTEKLENESFSSDESCNADDTDTPFKEVRYECGHCPRVYFRRISFLKHLKNDHNSPHDYQLLQSKRITWSGLYCALCKRSYKHPKSLANHIKRHGPDGELIQMNACFGQYFKNKEEADNHNRSIHNEIIKCEICDKIYADYDKLEAHQQYAHKQIPTEANDEKRYFSVCQKCGKKFTNKTALSDHKRSHCGRSPLYKCDECDTTFRSHQSLKIHKTIHTGELPHLCNFCGKAFRTYGQVRVHEKEHNEEKDKKSFKCSICARAFVHQQSLINHLTLHKV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -