Basic Information

Insect: Dioctria rufipes
Gene Symbol: -
Assembly: GCA_963924295.1
Location: OZ002744.1:8494291-8499047[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.3e-05 0.02 17.9 2.7 1 23 345 367 345 367 0.97

2 18 1.5e-05 0.0068 19.3 0.4 1 23 373 395 373 395 0.97

3 18 5.9e-05 0.027 17.5 1.7 1 23 401 423 401 423 0.98

4 18 1.7e-05 0.008 19.1 3.1 1 23 429 451 429 451 0.97

5 18 0.00012 0.057 16.4 5.8 1 23 457 479 457 479 0.98

6 18 7.2e-05 0.033 17.2 5.7 1 23 485 507 485 507 0.97

7 18 3.4e-07 0.00016 24.5 4.3 1 23 513 535 513 535 0.98

8 18 1.3e-07 5.9e-05 25.9 2.4 1 23 541 563 541 563 0.97

9 18 0.00017 0.078 16.0 5.7 1 23 569 591 569 591 0.97

10 18 6.7e-05 0.031 17.3 6.4 1 23 597 619 597 619 0.98

11 18 1.8e-05 0.0084 19.1 4.7 1 23 625 647 625 647 0.98

12 18 4.3e-05 0.02 17.9 8.3 1 23 653 675 653 675 0.98

13 18 6.4e-06 0.003 20.5 7.8 1 23 681 703 681 703 0.97

14 18 7.6e-07 0.00035 23.4 7.7 1 23 709 731 709 731 0.98

15 18 0.00024 0.11 15.6 9.5 1 23 737 760 737 760 0.95

16 18 0.0002 0.092 15.8 0.5 1 23 766 788 766 788 0.97

17 18 0.00086 0.4 13.8 4.3 1 23 798 820 798 820 0.99

18 18 1.2e-05 0.0056 19.6 2.9 3 23 828 849 826 849 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.3e-05	0.02	17.9	2.7	1	23	345	367	345	367	0.97
2	18	1.5e-05	0.0068	19.3	0.4	1	23	373	395	373	395	0.97
3	18	5.9e-05	0.027	17.5	1.7	1	23	401	423	401	423	0.98
4	18	1.7e-05	0.008	19.1	3.1	1	23	429	451	429	451	0.97
5	18	0.00012	0.057	16.4	5.8	1	23	457	479	457	479	0.98
6	18	7.2e-05	0.033	17.2	5.7	1	23	485	507	485	507	0.97
7	18	3.4e-07	0.00016	24.5	4.3	1	23	513	535	513	535	0.98
8	18	1.3e-07	5.9e-05	25.9	2.4	1	23	541	563	541	563	0.97
9	18	0.00017	0.078	16.0	5.7	1	23	569	591	569	591	0.97
10	18	6.7e-05	0.031	17.3	6.4	1	23	597	619	597	619	0.98
11	18	1.8e-05	0.0084	19.1	4.7	1	23	625	647	625	647	0.98
12	18	4.3e-05	0.02	17.9	8.3	1	23	653	675	653	675	0.98
13	18	6.4e-06	0.003	20.5	7.8	1	23	681	703	681	703	0.97
14	18	7.6e-07	0.00035	23.4	7.7	1	23	709	731	709	731	0.98
15	18	0.00024	0.11	15.6	9.5	1	23	737	760	737	760	0.95
16	18	0.0002	0.092	15.8	0.5	1	23	766	788	766	788	0.97
17	18	0.00086	0.4	13.8	4.3	1	23	798	820	798	820	0.99
18	18	1.2e-05	0.0056	19.6	2.9	3	23	828	849	826	849	0.95

Sequence Information

Coding Sequence: ATGGAGTGTTGTATTGGCGAGTACTGGGAAATACTGCTTGGAAAATATTGGGTTGTTACAAATCTCTTCCAAGGATCAGGGCAAGGTGCTTATACTTTAGAATCGCCGCATATTATGCCTTCAATTCCTTCCTCATTGCCACCTCCAATATCATCTACACATACTTCTACGGCTACGGGTACGGCTATTGTTAAAATAATTGACACCATAAAACAAGAAGAAAATCATGTTCAGCAGCGTCATTCTCAACAACCACCAACACGACAACAGCAAGTTGTTACATCCGTTAACTCTAACTCAATACAGATTCCAAATCCAATGATAAATCCTACAAGTCAAGGCCAACAACAGCTCCCAAACGGAACAATTATATCAACATCTGGTCCACCTGAACAAATTCAGGTTTCTGTTAATCCTGAAAACAGTCTTATGGTTATGGATGCATCAACAAAGCAGGAAAAAATGCCTAATATGAATCCAAATATGAATTCAGAGCCAATGCAAGTTGATAGACCAATGTCGCACAATATGCAAGATACAGTTAAAGAAGAAAAGCCATTTTCCAATTGTAAACCGCCAATAATTCAACAAATACATCCTCATCATCTACCACCCGATAGTAAGATGCATGTCCCTCATTTGTTGGATGTTCGTAATCCAGATGGTTCTATTGTTAAACTTCCTGCACCTTCAGAGCAAGAGTTAGGAAAGTCTCTAGGGGTTGAAATGTACAAGGTTAATATTGAAGATTTAAGCCAGTTCTTATCATATCATGAAGTATTTGGAAAATTGCACGGAGATGTTATGAACCATCAAATCTCTCATTCTAACACACATCCCACTAATACGGTTACAAATGCTCCTGGTATTCCTACATCTACCAATGGCGTTTCCGTGGTCAGTAATATAACTTCCACATCAGGTGAACTTTTAATGCCAAAAATGGAAGTAGGACAAATCCCTGGCATTAATGCAAATCACGGTGCTGGTCCTCATCCTTTAGGAGATACAGCTAATATTACTCCGGCCACACATAGTTGTGACATATGTGGAAAAATGTTTCAATTTCGTTATCAGCTTATAGTACATCGTCGCTATCACAGTGAACGAAAACCGTTTAATTGTCAAGTTTGTGGACAAGGATTTACATCTTCTCAAGATTTAACACGACATGGAAAAATTCATATTGGTGGTCCAATGTTTACTTGTACTGTATGTTTTCACGTCTTTGCAAATGATGCAAGTTTAGAAAGGCATATGAAACGTCACTCAACTGATAAACCATTTGCTTGCACAATATGTCAGAAAACGTTTGCCCGTAAAGAACATTTAGATAACCATTTCCGTAGTCATACGGGGGAGACACCATTTCGGTGTCAGTTTTGTGCAAAAACGTTCACCCGAAAGGAGCATATGACGAATCATGTTCGCAAGCATACAGGTGAAACACCTCATCGATGCGATATTTGTAAGAAATCCTTTACTCGTAAAGAGCATTATGTAAATCATTACATGTGGCACACAGgaGAGACACCTCACCAATGTGAAGTATGTGGAAAGAAATATACACGGAAAGAGCATCTAGCGAATCATATGCGTTCACATACCAATGATACACCGTTTCGATGTGAGATTTGTGGAAAGAGTTTTAGCCGGAAGGAACATTTCACCAATCATATTCTATGGCATACTGggGAAACTCCTCATCGTTGTGATTTTTGTGCGAAAACTTTTACTAGAAAAGAACATTTATTGAATCACGTTCGACAACATACTGGAGAATCACCACATCGTTGTACATATTGTCTTAAAACGTTTACACGTAAAGAACATCTTGTTAATCATGTTCGCCAGCATACAGGCGAAACACCATTTAAATGTACATTTTGTACGAAAGCTTTCACAAGAAAAGATCACATGGTTAATCATATAAGACAACATACCGGGGAATCTCCGCACAAATGCACATTTTGCACGAAAACGTTTACAAGAAAGGAACATCTTACTAATCACGTTCGGCAACATACTGGAGAATCTCCGCATAGGTGTACCTATTGTAAGAAAACCTTTACACGAAAAGAGCATCTCACAAATCATGTTCGTTTGCATACTGGTGATTCGCCGCATAAGTGTGAATATTGTCAAAAAACATTTACCAGGAAGGAACATTTAAATAATCATATGCGACAGCATTCTAGCGATAATCCACACTGTTGTAACGTGTGCAATAAACCATTTACAAGAAAGGAGCATCTTATAAATCATATGTCCCGTTGTCATACCGGTGATCGACCTTTTGCTTGTGAAACGTGTGGaaaatcttttcctttaaaaGGAAATTTACTTTTCCATCAAAGAAGTCACACGAAAGGACAAGATGTAGAGAGACCATTTAGGTGTGATAAATGTCCAAAAGATTTTATTTGCAAAGGACATTTGGTATCCCACATGAGATCACATTCAGGCGAAAAACCACATTTATGCACATTGTGCAGTAAATCTTTTGTTGAGAAAGGAAATCTTAAGCGtcatatgaaaatgaatcatCCAAACGTTATGTTACCACCACCGGCAACAATGACTACAACTATTAAAACCGAATCAATTCCTACGAGTACCAGCTCACCACAATTCATAAATGAACGCATTCAGCTTTTAACTAAAGCAAATCTTTTGCCTATTAATAATTTAGCCCCACATCAGCCACCTACCATGCACACAATTCAACAAATCACTTCATCACCAGCTAATTCGGTTGGTGGTAATGTTAACAATAATACTTCGCTTCCAGGAGGTTTAGTACCAATAATAACATCAACAATAACATCACATGCAAgtcagcaacagcaacaacaacagcagcagcaacagcaacaacagcaacaacagcagcagcaacaacagcagcagcagcagcagcaacaacaacaacagcaacaacaacaacagcagcaacaacaacaacagcagcagcaacaacaacaacagcaacaacaacagcagcagcagcagcaacaacaacaacaacaacaacagcagcagcaacaacagcaacaacaacatgtTGTTGTTGCACCTCAAATGCATCAACCTCCACATCATCAACAATCTAACGCGAATCCGTCTGACCAACCTCCGTCATCTGTGCCGATTACAATAATTCAAACAGGTGATCCAACAGCTATAGCTCGAGCAGCTATTCAATTGCAACATGCTATTCCCACAAATGTGGAACAGCATCCCGTAgtgtattaa
Protein Sequence: MECCIGEYWEILLGKYWVVTNLFQGSGQGAYTLESPHIMPSIPSSLPPPISSTHTSTATGTAIVKIIDTIKQEENHVQQRHSQQPPTRQQQVVTSVNSNSIQIPNPMINPTSQGQQQLPNGTIISTSGPPEQIQVSVNPENSLMVMDASTKQEKMPNMNPNMNSEPMQVDRPMSHNMQDTVKEEKPFSNCKPPIIQQIHPHHLPPDSKMHVPHLLDVRNPDGSIVKLPAPSEQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVMNHQISHSNTHPTNTVTNAPGIPTSTNGVSVVSNITSTSGELLMPKMEVGQIPGINANHGAGPHPLGDTANITPATHSCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTSSQDLTRHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMTNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVERPFRCDKCPKDFICKGHLVSHMRSHSGEKPHLCTLCSKSFVEKGNLKRHMKMNHPNVMLPPPATMTTTIKTESIPTSTSSPQFINERIQLLTKANLLPINNLAPHQPPTMHTIQQITSSPANSVGGNVNNNTSLPGGLVPIITSTITSHASQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVVVAPQMHQPPHHQQSNANPSDQPPSSVPITIIQTGDPTAIARAAIQLQHAIPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628542;
90% Identity: iTF_01049832;
80% Identity: -