Druf103759.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002745.1:20683788-20684105[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.5e-06 0.00077 21.7 0.0 16 37 21 42 15 47 0.88 2 2 9.7 3e+03 0.6 0.0 20 39 66 85 65 92 0.71
Sequence Information
- Coding Sequence
- ATGGCATCAAAACAAGAGGAAATGagcaaattaattatttccaagCATTATGAAAATTCGGATATGTCACAAAGAAAGTTGGCAAAAATCCTCGATATTCCAAAAACAACCATTCAAAATGTTTTGTCTAAATTTTCGAAATCTTCCAGTGATCAAAGAAAACCTGCTTTCAAAAGGAATCCTAACATATTTGTAAGGCATATGGCTGATAAAATAGGAACATCAAATTCAACTGTACAAAGGATGAAGGTTAGAGAAGAATTTATGAGCTGTAAAGTTCAGAAAGCTGCCGATAGATCTGTAGAAATGGAAAAATAG
- Protein Sequence
- MASKQEEMSKLIISKHYENSDMSQRKLAKILDIPKTTIQNVLSKFSKSSSDQRKPAFKRNPNIFVRHMADKIGTSNSTVQRMKVREEFMSCKVQKAADRSVEMEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -