Druf064641.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002742.1:45820060-45821719[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 4.4e-08 1.4e-05 27.3 0.0 5 45 1 41 1 41 0.94
Sequence Information
- Coding Sequence
- ATGCAGAGGGCTATAGATGCTATTAATAATAAGATAATGGGGTATCAAAAAGCCAGCAAGTTTTTCCAAGTACCTAAGACAACTCTCATTCGAAAAGTAAAGACACAAAATTCCTCGAAGAGATTTGGACGTTTTAAGCAAGTTTTTAATGAGGATCAAGAAAAGGAAGATGTACGATCGGTGGCATTTCAACTTGCAGAAGCCAATAACTTAGAACACAAGTTTGACAAAAAAACTGGCCTCGCAGGAAGGGACTGGCTGTTCAATTTTCAGAAGAGACATCCAGATATTTCTTTGAGAAATCCCGAGCAAACATCGAAGGCACGGGCTCAGGCTTTCAACCGACCTATAATCACGGCATTTTTTACAATGTATAAGGAAATGTACGacgagaaaaaatttcattcaccAAGAATATTCAATGTGGATGAAACCGGGATTACAACGatACAAACTAAGTCTTCCAAGATATTTGCTCTCAAAGGCCGCAAACAAGTTGGTACCTTAACGTCTGCGGAAAGGGGTGTACTTTCAACCGTAGTTATCTGCGCGTCAGCTTCTGTGCCTCCGATGATTATATTTCCAAGAAAGAGAATGAAACCTGAATTAATGGACGGAACACCACCAGGAGCAACTTTTGCTTGTCACGAATCAGGGTGGATGCAAACCGAAATATTTACAAATTGGTTTCGCCACTTTATTCGATTTACGAAAACAACACCGGATGATCCATGTTTGCTTATTTTAGATGGTCATGTGATGCatactaaaaatACTACAGCCGTTAGATGTATCATTCATGAGGCCACTGAATATTTCTCTCAATCTTGTGagaaatttttgagaaataatCCTGGTAGAGTAGTGACCCAATTCCAAATTGGGGGACTGTTCGGTGAAGCATATCTAAAAGCGCCCACACCAATCAACATTATCAGTGGTTTCAGAAAGACAGGATTATATCCAGTAGACCCCAATGTCTTTGACGATGAAGACTTTATCGCTGCTGAGGTTACGGATATAACTCTTACACCCGAACACGTAGTAGGTGATTCGCCCACTAATACTGTAACTTCCATGCAAATGCATATAATACCCGATATACCGACAAATACCTCTGCAGCCATTCCTCGGATTCCTCCTTTAATTTCAACACCGAGTACATTTGGTTTAGTATCTCCAAGAGTAATACAACCACTTCCAAAAGTCTCTGCTACTGCAAGCTTAAGAAAAAATAGAAGAGCAAAAGGTAAAGCAGCTATATTGACATCAATCCCATACAAAAGAGAGCTTGAGGAAAGTTTGATAAATACACCAAAAACTACTAAATATAAAagtaataagaaaacaaaacctAAACGAGAAAAGATGTCTAAATCCAAAAGCGAAACTGATATAGACGACAACGACTGTCCTTGCCTATATTCTCACGGGCAATACAGCAATTCCAAAAAAGGAATTCTTTTTTTGtag
- Protein Sequence
- MQRAIDAINNKIMGYQKASKFFQVPKTTLIRKVKTQNSSKRFGRFKQVFNEDQEKEDVRSVAFQLAEANNLEHKFDKKTGLAGRDWLFNFQKRHPDISLRNPEQTSKARAQAFNRPIITAFFTMYKEMYDEKKFHSPRIFNVDETGITTIQTKSSKIFALKGRKQVGTLTSAERGVLSTVVICASASVPPMIIFPRKRMKPELMDGTPPGATFACHESGWMQTEIFTNWFRHFIRFTKTTPDDPCLLILDGHVMHTKNTTAVRCIIHEATEYFSQSCEKFLRNNPGRVVTQFQIGGLFGEAYLKAPTPINIISGFRKTGLYPVDPNVFDDEDFIAAEVTDITLTPEHVVGDSPTNTVTSMQMHIIPDIPTNTSAAIPRIPPLISTPSTFGLVSPRVIQPLPKVSATASLRKNRRAKGKAAILTSIPYKRELEESLINTPKTTKYKSNKKTKPKREKMSKSKSETDIDDNDCPCLYSHGQYSNSKKGILFL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00454599; iTF_00454575; iTF_00454577;
- 90% Identity
- -
- 80% Identity
- -