Druf048834.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- clz9
- Assembly
- GCA_963924295.1
- Location
- OZ002741.1:100257210-100259252[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.5e-08 2e-05 26.8 0.0 1 37 16 52 16 58 0.92
Sequence Information
- Coding Sequence
- ATGCCacgaatatatgtaaaaaaaggcACTAGAACGAGAGACGTAGACGAAGATGCAATGAAGTCTGCGATGCAAGCAGTTTTAGATAAAACTTTATCTATTAGGAAGTCCGCACAAAAATACGGCATAAAACCGACAACTCTTCAAAGTCGCTTAACGAATTCCCATAAAAAGGCTGCTGCTGAAAAGGAAGGTAACAACACTCCGTCGCGTGTTTTTTGTTCCAAGTTCACATCGAATCAAGTGTTCACTACCGAAGAAGAGACTCTATTGAATGAGTACATCGCGAAATGTTCCAAAATGCATTATGGGTTGACAATCGTACATGTGAGGAAACTGGCATAtgaatttgcaaaattgaatcaGCTGCATTATCCACCTAGCTGGAATCATAACAAAATGGCTGGAAAAGAATGGCTGGACAGTTATCGTAGGCGAAATGCAAATTTAAGCCTGAGGAAACCTGAAAACACAAGTGCAGCACGATCTTATGGATTCAACAAGACAGCTGTAACTGATTTCTACGAGAAcctagaaaaggttttgaaaaaaTATGCACTCACTGCAGATCGGATTTATAATTTTGATGAGTCAGGGATATCCACAGTGCTGAGCACGCCAAAGGTATTAgcggaaaaaaaccaaaaacaaattgGTCAACTTGTTTCAGCAGAAAGAGGTGAACTAGTAACATTCGGAGGAATTATTTCAGCTAGTGGTAACACAATACCGCCGCTATTCATCTTTCCCAGGGTACATTTCAAGGATCACTTTATGGAAGGTGCTCCAGAAGGCAGCCTGGGAATGGCTGCAAAGAGTGGCTGGATAAACTCTAGTATATTTTTGGAAGTCCTGAAACACATTCAAAAAAAAACATCCTGCTCTAAAGATAACACTATTCTGCTCCTCGTTGACAATCACGAAAGCCATGTGACAATAGAAGCGGTAGACTATGCTCGTGGTAATGGCATTATTTATCTGTCGTTTCCGCCCCATACAACACACCGTCTCCAACCTTTAGATGTGGGAGTATTTGGACCTTTTAAGGCCAAGCTAAAGATAGCGTTTAATGATTGGCATGTGAATAACCCGGGGAAAACTCTGAATATATACAATATTCCAAAACTGGCCAAAATTGCTTATTTTGAATCAtttaactgcaaaaatatttcaaatgcttttgaaaagacTGGGATATGGCCATTTAACAAATTGAATTTCAGTGACGAAGAATTTGCAGCTGTGCAAGTTTACCACTCCGATTCTAAAGCAGTCTCAGATGACAACATGCAACAAATTATACCTGAAGGAATAACTCTTACTCAACAAGATCTATCATCTAGATTGCCACTTGCATCACCCTCTACATCATCTGTGGGATTAATAACGCCAGAAATTATCCGACCTTACCCTAAAGTAGACAGGAATGACCCTAAAAAGACGAAGAAAGGAAAACTGCCAGGAAAATCAAGGATATATACAGATACTCCCGAAAAAAATAGACTGCTAGAAATAGAAAGAGCAAAAGAGATGAAGAAACAAGAGCAAGAGAGAAAACAAAAGGCTAAGGAGATGAAACGCGCGTTAAATTTGCTATCAGACACAAATAAGAAAACCAAACCAAAGAAACAGAAGAAAACTATAGAGACTGATAGTGAAGGTGAGACTGACATAAGTTTAAGAGAAAGTTCTTGTTCTCCCTTAGAAGAGATGTCTGAAGGACCTGATATTGAGAACGAAATTCCAGTTATGACGGAAAACATTAAAGAAGAAAGCTTTGTGTTGGTGAAGTTCGAAAAGAAAAAGACtgttttatattatattggaCAGGTGGTAACAAAATACCCCATTGAATATAAAGTTTCATTTCTGAGAAAGAAGCCGGGTACCTGGAAATTTGTTTTTCCCAATACCAAAGACGAAGGAACAGTTTACTTATCAGACGTGGTCTGTGCATTGCCACCACCCAAATCTGCTTCTACAGCAAGAACAGCTAATATCTTTAGATTTGAAAAAGATCTTACTATGTATAATGTGCAATAA
- Protein Sequence
- MPRIYVKKGTRTRDVDEDAMKSAMQAVLDKTLSIRKSAQKYGIKPTTLQSRLTNSHKKAAAEKEGNNTPSRVFCSKFTSNQVFTTEEETLLNEYIAKCSKMHYGLTIVHVRKLAYEFAKLNQLHYPPSWNHNKMAGKEWLDSYRRRNANLSLRKPENTSAARSYGFNKTAVTDFYENLEKVLKKYALTADRIYNFDESGISTVLSTPKVLAEKNQKQIGQLVSAERGELVTFGGIISASGNTIPPLFIFPRVHFKDHFMEGAPEGSLGMAAKSGWINSSIFLEVLKHIQKKTSCSKDNTILLLVDNHESHVTIEAVDYARGNGIIYLSFPPHTTHRLQPLDVGVFGPFKAKLKIAFNDWHVNNPGKTLNIYNIPKLAKIAYFESFNCKNISNAFEKTGIWPFNKLNFSDEEFAAVQVYHSDSKAVSDDNMQQIIPEGITLTQQDLSSRLPLASPSTSSVGLITPEIIRPYPKVDRNDPKKTKKGKLPGKSRIYTDTPEKNRLLEIERAKEMKKQEQERKQKAKEMKRALNLLSDTNKKTKPKKQKKTIETDSEGETDISLRESSCSPLEEMSEGPDIENEIPVMTENIKEESFVLVKFEKKKTVLYYIGQVVTKYPIEYKVSFLRKKPGTWKFVFPNTKDEGTVYLSDVVCALPPPKSASTARTANIFRFEKDLTMYNVQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00454660; iTF_01293580; iTF_01170521; iTF_01170536; iTF_01170522; iTF_01170523;
- 90% Identity
- iTF_00454660;
- 80% Identity
- -