Druf063915.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002742.1:31389456-31389833[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-05 0.0041 19.4 0.0 17 37 1 21 1 23 0.94 2 2 0.043 13 8.2 0.0 17 39 55 78 51 82 0.81
Sequence Information
- Coding Sequence
- ATGTCACAAAGAAAGTTGGCTAAAATCCTCGATATTCCGAAGACAACTATTCAAAATGTTTTGTCTAAATTTTCGGGATTTTCTAGTGTCCAGAGAAAACGTGGAGCAGAAAACAAGGACATTCAGGACAAAGTCACCGCTACTTTCAAAAGGAATCCTAACCTTTCTGTCAGGGATATGGCTAATAAAATAGGAATATCGAAGTCAACTGTGCAAAGGATGAAGGTTAGAGGAGGATTGAGAACTTTTAAAGTTCAGAAAGTGGCAGACGGATCTGTAGAAAAGGAAAAAATAGCGCAAAAGAGGTCTCGAAAATTGTATGAACGATATTTGACGAAATATTCTTGCTGCGTTATGGACGACGAGACTTATTGCTAG
- Protein Sequence
- MSQRKLAKILDIPKTTIQNVLSKFSGFSSVQRKRGAENKDIQDKVTATFKRNPNLSVRDMANKIGISKSTVQRMKVRGGLRTFKVQKVADGSVEKEKIAQKRSRKLYERYLTKYSCCVMDDETYC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -