Druf078914.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dioctria rufipes
Gene Symbol
-
Assembly
GCA_963924295.1
Location
OZ002743.1:19968276-19993796[-]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.7e-09 1.5e-06 30.4 0.0 2 37 247 283 246 290 0.88

Sequence Information

Coding Sequence
ATGACCGAACAAGATCCAGTCGACCACATTCTGTACGGACAACAGTGTCAATGTAGTAAAGGTCCGAATTCGCAGAAATCCGATCCGACGACAAAAATTAATGGCTCAACAGATGAAGATAAaacTGTTAAGGCCACTCAACAATGGGAGGCATATAAAACAGCTCTAACGGAATACAACAAAGAGCTCAGGAGATCCAAAAGAGGGAGCTGGAAAAAATTCTGCGAAGAAATTGAGAGTACCTCAAAAGCTTCGCGACTCCAAAAAGCCTTTTCCAAGGATCATAACAACGGCATTGGCTCCATCAAACACTGTGATGGAAGCCTTTCCGTCAATACCAAGGGAACACTAGAGATCCTTCTCAAAACGCACTTCCCACTCTGCAACTTTGTGACCGAGGAGCCCGACGTAGACGCCAGATCCTCAGTGATACCAGTGGTGCTAAACAGGGATTACCGATTAGCAAAGAAAATTGTCACCGAAGCCAAAGTAAGATGGGCTGTCAAGTCCTTCAAACCTTTCAAAGCTCCTGGCGGCGATGGCATATTTCCGGCATTACTGCAAGAATCGCTGGATCATATTAAGCCCCTTATCACTGAGATATTTAGGGCCAGTCTGTGCACGGGATACATCCCTAAGGCATGGAGACTAACCAAGGTTGTTTTCATACCGAAATCGGAAAAAATACCAAGGGTTTATAAAAGAAAGCTCGGTGCACGAGAATACAAAAATTACTCTCATGAAAGTTTGGAGAAAGCTTTGGATGAAATACATTCTGGCAGGATGTCAATTAGAGCTGCATCCAAATATTTTAAGATTCCATTTGGGACGCTCCATAATAAAATCAACGACAAACATTCTAAAAGTTCTGGGGGTCAAACGGCATTAAATGTTggtgaggaaaaaaaaaatcattga
Protein Sequence
MTEQDPVDHILYGQQCQCSKGPNSQKSDPTTKINGSTDEDKTVKATQQWEAYKTALTEYNKELRRSKRGSWKKFCEEIESTSKASRLQKAFSKDHNNGIGSIKHCDGSLSVNTKGTLEILLKTHFPLCNFVTEEPDVDARSSVIPVVLNRDYRLAKKIVTEAKVRWAVKSFKPFKAPGGDGIFPALLQESLDHIKPLITEIFRASLCTGYIPKAWRLTKVVFIPKSEKIPRVYKRKLGAREYKNYSHESLEKALDEIHSGRMSIRAASKYFKIPFGTLHNKINDKHSKSSGGQTALNVGEEKKNH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-