Druf040122.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002740.1:352025045-352026186[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-08 4.7e-06 28.8 0.0 2 38 16 52 15 58 0.88 2 2 6.8 2.1e+03 1.1 0.0 12 25 54 67 51 67 0.79
Sequence Information
- Coding Sequence
- ATGGTACGGAAGTATGTTAGGAAAACGCAACGGCAGAATTGGTCGGAGAATAGCATGCAAAGTGCTATCGATGAAATATTGAGTGGTAAAATCGGATTTAAGAAAGCCGACCAAGCGCACAACGTTCCTCAATCAACATTAGAAGATAGGGTGAGAAAAGTGAAACAGGGTGTGATATCCATCGATAAGGCTGCGAAGAAAGGTATGGGAAAATTCAAAACTGTTTTTACAGCAGATCAAGAAGAACAGCTCAAGGATTATTTAAAAACAATGGAGGCAAGATTATTTGGGCTGACTACAAAGGACCTGCGACGTTTGGCCTTTGAGCTAGCAGAAAGAAACGATCTTACACATAATTTCAATCGGCAGGAAGGTATGGCGGGTTCTGATTGGCTTAAAAATTTCATGAAACGGCATCCTACTTTATCACTTCGAGCTCCTGAACCAACATCGGCCGCAAGAGCTATGGGTTTTAATAAGCCAGCGGTGGACCAATACCATTTTACCccagaaaaaatttttaatgtagaCGAAACGGGAATATCAAGCGTTCCGAAAAGTCAGTCAAAAATAATTGCTGAAAGGGGTCGTCGCCAAGTCGGTGTTTTGACTTCAGGTGAAAGAGGCCAGCTCATAACTGTTGAAATTTGTTGTTCCGCTGCCGGCCACTTTGTTCCACCTTTAATTATTTTCCCTAGGAAAAGAATGAAAGATGAGCTAAAGGACGGAACACCGCCGGGGACAAAAATAGTGTGCCATGAAAGTGGGTGGATGCAGGCTGAAATATTTGTGCAGTGGTTGAAGCATTTCTGCAAACACATAAAACCATCAGTTGACGATCCTGTACTTTTATTGCTAGACGGCCATGCGACCCACACCAAAAACTTGGAAGCGATTGATTGGGCGCGAAAAAATGGGATTATTTTGTTGTGTTTTCCCCCACACTGCAACTTACAACCCTGCGATGTAAGCTTCATGGGACCACTAAGCGCATATTACAGCCAAGAAGTTAAAATTTGGCTTCGTAATAATCCTGGTCGTGTTGGAAGAACCATCAACCCCGTCAAGACTTTCTAG
- Protein Sequence
- MVRKYVRKTQRQNWSENSMQSAIDEILSGKIGFKKADQAHNVPQSTLEDRVRKVKQGVISIDKAAKKGMGKFKTVFTADQEEQLKDYLKTMEARLFGLTTKDLRRLAFELAERNDLTHNFNRQEGMAGSDWLKNFMKRHPTLSLRAPEPTSAARAMGFNKPAVDQYHFTPEKIFNVDETGISSVPKSQSKIIAERGRRQVGVLTSGERGQLITVEICCSAAGHFVPPLIIFPRKRMKDELKDGTPPGTKIVCHESGWMQAEIFVQWLKHFCKHIKPSVDDPVLLLLDGHATHTKNLEAIDWARKNGIILLCFPPHCNLQPCDVSFMGPLSAYYSQEVKIWLRNNPGRVGRTINPVKTF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -