Druf054555.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Dioctria rufipes
Gene Symbol
pol
Assembly
GCA_963924295.1
Location
OZ002741.1:158501101-158507920[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 4.2e-10 1.3e-07 33.8 0.0 4 40 9 45 6 50 0.88

Sequence Information

Coding Sequence
ATGTTCTTTCAATACGCTGAGTCTGATCTTCGAGCGGCTATAGACGATGTCCGAGAAAAAGGAATTTCCCTAAGGAAAGCTTCAAGAGACCATGGCATACCATTCGGAACATTACACAACAAGATAAAAGGAAAATCACCGGATAGCAGACGGATGTGCCCGCCGACCACCCTCAGCAAAGCAGAAGAACAGCTCCTTGCTGAATGGATCAACGCGTATGCCAAGAAGGGGTTTCAATTAAGGAGGAGAACACtatttgaaaaagtaaaaaacatcaTTGAAACGGATAAAAGGCCAAACCCTTTTACAAACTCAACCCCTTGGGAAAATGGTTTAAAAGATTCCTGCGAAGGATCAGTTCCATTTCTGAGCGGAATGCAGAGGCTATCAAAACAGCAAGAGCAACAGTGTCGGAGAACAACATACCGACCTAGTTCGAATTTTATGCAACAGCCTAATCCTAACTTAGGCGGGCAGCCTAACTTCAACTTCATGCCACCtccttcttcgaattttaaacgACAGCCTTCGTTTCCCCCAACTTCAAATGCAGGAGCTGTCAGCTCTGGACCAGTCGGGCTAGTCTGCAATCTAAATCCTTTTGACGGGACAGTATCCTGGTCGGATTATAGAATACAATTCGAGATTGTAGCGCGAAATAACAACTGGTCAGAGCAAGAGAAAGCTGACGCCATGGCGACACAACTGCGAGGTAATGCTCCATCAGTACTAAGCGTTTTCCCCCCAGGTCATCGCATTCAATACGGAGAGCTAATCGCGTTGCTAGAACAGCGTTTTGGAGTCGACTCCTACTCGAGCCAAGTGCAGTTCTGTGGAAGATCGCAAGGTGCGAGagaaagttttgcaaattttgcacTGGAGTTACAGCGACTTGCTACAACTGCATTTCCCTCCTGCCCAACGGATGTCGTTGATAGGATGGCAGAGTTACGATTTTTGGAAGGAATTCGGGACGACGAGTTGAGGACTTTGGTCAGAGTTCGGGGACCAAAATCACTGCATGAAGCAGTGAACGCAGCACAAGAACTAGCCACAGGAATTAATGTGGGAAGGAATGCCAGAGTTCATGTCGCGCAAGCCTCAGCTAATAAACGCAATTATGGAAGACGTAGAAAACCGACGAAAAACGTTGTAACAGCTGGAGAACAAGAGGCTATACGATTcgtttactccagcttcccatatcgaGATCCCACCCGCAGTTTCAATAGATTCGGGAAACGCATCAACATCGACCCACAGGGGCACCAGTCGATGAACATTCCTCCTGCCCCAAATAATAGAAACCACGCTGACGACCCCGCGGAATTTCTAGCTATAACCCCATCATCTCAAacgatttctgaaattttaaataatgagccACCTAGTAGTGAACGTCCAGAAGCTATGGAAAATCAATTGGAAGTGACTATCCAAGCCGTAGGTCCTTCTAAAGACAGTCTCACCGTCCAAGGACTATTAAACGAGAAGCCTTGTAGTTTCATCTTAGACACTGGAGCCACAGTCTCTATTGTTCACCCTACCTTTCTAAGCCGTTCATCACTGACAAAGCTTGAGAAATCGCATGTCGTGATTAGGAGCGTAACGGGTAGCCGGATAGATGTTCTAGGTCGACTGAAGGTCGAACTTCACTTAGGAACTTATCGTGTCCACCACACGATGCTGGTCGCTCATATTGAGCCTTTGTGCATATTAGGCGTGGATTTCTTGGATGGTAACAATTGCCGGCTAGATTTCGAAAGGAATGTGCTTCAAATAGGGAATGGGACCGTGAATCTTAGTAAACCCGATTACCCcgagataaaaataaatctccAAGAAAGCATATTGCTGACCGCTCTTAGCGAAACCATTATTCCTGTAAATCGAAAGCGAAATGTGGAAGATGGACCGATTTTACTATTAGACCCTAGGCCCGATTTACCATACGGCATACACGCTGCGCGCGTCTTAGTAGAGTCAAAAGCGGAAAATATCCCAATTCGATTTATTAACTTATCAGCTACTGATGTTTTCCTTCCTCGGGATAGCTTCATCGGATGTCTGGAGCCTGTCATTATTGTAAACGCGGTCGCTTATACGAGCGATGCAGAGCTAGACCCTCTTGGTGTCATTCTCAACGGAGTGCCCGAGGGACTGTCTAGCGAAGACAAGCAACAGCTGAACTCCCTTCTAGAtgaatttcgcgatattttttcCACTGGCCCTAGCGACGTAGGCCGAACAGGAATCACAAAACATCACATTGATGTCGGCGAAGCGAAACCTTTCAGGATTCCACCTCGAAGGGTCCCATTGGCAAAAAGGGCCGAGGCCGAGCAATTGGTACAGGAAATGGAGAGCAATAACATTATCAGGCCATCCAATAGTCCTTGGGCGTCCCCCGTAGTTCTTGTTAAGATGAAGGATGGCAGTACCAGGTTTTGCGTGGACTATCGGCGGCTAAACGATATCACCAAGAAAGATTCTTATCCTCTCCCCAGGATGGATGATACGCTCGTTTCTTTCTCCGGATCTACGTGGTTTTCTACCCTCGACCTCCAAAGTGGCTATTGGCAAGTCGAAATGAGCGAACAGGATAGAGAGAAAACGGCCTTCGCGACTGGAGCCGGTCTTTGGGAGTTTAACGTAATGCCCTTTGGTCTGTGTAACGCCCCCGCCACCTTCGAACGTTTAATGGATGGCGTATTTCGTAAACTAGGTACAGAAACCGCTCTAGTATATCTCGATGACATTATCGTTCATGGGCGTGACATCGAAGACCAACTTGCTAACCTGAGAAAGGTATTTCAGCGACTCCGTGCGGCCAATTTAAAAATTAGCCCGAACAAATGTCATCTTCTTAGTCCAGAAGTGAAATACCTAGGACACATAGTATCTGCGACGGGATTGCAAACGGATCCAAATAAGACGGATACTATTCAAAATTGGCCAGTACCTAAGACGAAGAAAGAGGTACGAAGCTTCCTTGGACTGGCATCTTACTATCGAAGGTTCGTTCAGGATTTCTCTACTATCGCTAAGCCTCTATCCGAATTAACTGAAGACAAGAGGAAGTTTCTGTGGGAAAAGAGGCAACAGGATGCCTTCGAGGAATTGAAGTTACGATTAATTTCCCCTCCTATCCTGTCTTTCCCACAAGCAAAAGGAGAATTCATACTCGATACGGATGCCAGTCAAACAGGGATCGGAGCTGTCCTAAGCCAAGTTCAAGATGGAAATGAAAAAGTGCTCGAATACTATAGCAAAACGCTCAGCAAGCCTAAAGGAAATTATTGCGTTACCAGGAAAGAGCTGCTGGCTGTAGTACGAGCAACAAGTCACTTTCACCATTACTTATTTGGTAGACCATTTCGAATCCGCACAGATCACGCCTCACTTCGTTggctattaaattttaaagatccCGACGGACAGTTGGCGAGATGGCTGGAGAGGATACAGCAATACGATTTCGTCATCGAACATAGACCTGGCCGGAAACACCTAAACGCGGATGCTTTGTCACGTCAACCATGCGAAAATTGCGTTCATTGTGACCAGAAAGAAAACCGAGAGCAAACGCAACTCGTAGACTTGGTAGCCATCGAACCAGCATTCGACTTAGCTTCAGAACAAGACCGAGATTCTACTCTACGAATCGTGAAATCCTGGTTACAACAGAATCAGAGACCGTCGAGAGAGCAGGGAATCATTGCGACTAGTGGACGATGTTTTACACTTCACCAGGCACGGGCACCAGGACATCCTTGTAAAAAAGGCGGACATTTTGGAGTAAGAAAAACGGTCGAAAAGATTAAAGAACGTTGGTACTGGCCTACTTTGCAAGCTGACGTAGAAATATGGTGCGCCAAGTGTCCTCTCTGTCACTCCAAAAGAGGCCCTGCTAGAAAAACCAGAGGAAACCTTCAAATCTACAACGTAGGAGCTCCCTTCGAAAGAATCGCGATTGACGTACTGGGTCCACTCCCAAAAACCGATAGAGGAAACAAATACGTTATTGTCGTAATCGATTATTTTACGAAGTGGCCAGAAGCTTTTGCGACACCAGATCAAAAGGCCGAAACCATAGCAGACGGATTTATCGAGAACGTACTTACTAGATTTGGCATGCCTTTCCAACTGCATTCGGACCAGGGTCGAAATTTTGAGTCTGACcttctacaagtaattttacaacgcTTGGGCATAGAAAAAACTAGGACAACTGCTCTGCACCCTCAATCAGACGGGATGGTTGAGCGATTTAATCGAACGCTTCTAGATTACCTGTCCAAGTTTGTCAGTACTAGCCAAACGAACTGGGACCAGTTCCTCCCTTTCGCACTTCTGGCATATCGATCCTCCATTCACGAGAGCACCAAATTCACCCCCGCGCGCCTCAACTTTGGTAGAGAACTAAGATTACCTTCGGACCTTTCTTACGGCCCTTCACCTGGCGGATGTAACACAGCAGTAGATTATGCCGAGAGGCTGACCCAGACCCTTGAAAAAATCCACTCTTTAACCCGGAAGCATCTAACTCTGTCGTCCTACCAGATGAAAACCCAATATGATCTTAGAGCGCATCCTCTCCAATTTTCTGAGGGCGAACAAGTCTGGATTTACAATCCAAAACGCCGAAAGGGCAAAAGTCCCAAACTGCAACGTGACTGGGAAGGTCCTGGCACGGTATTGTCTAAGCTAAACGATGTCCTCTATAGAGTTGAGTTCCCAGGAGGTCGAGTGAAAAAGGTCCTCCACATAGACAGACTAGCTAAATTTTGTAGCGAAGAGACTCGAGCTAATAACACCTTTAGCGTTGGGGTCGACTCGAGTGTAGACAACACAAATGCTATTAGCTGTATCGCACCGTGGGTTAAATACTCCAAGCCAGCCGTACcgaattttctaagaaaatgtgGTTTCAAGATAGGGAAAGGGTTGGGTAAAAACTTGCAGGGTAAAGTCGAACCCATTACAGTTAGGTCTCGCACGTCGCGGGCCGGTTTCGGTGCAAAGGCCCAAAAATAA
Protein Sequence
MFFQYAESDLRAAIDDVREKGISLRKASRDHGIPFGTLHNKIKGKSPDSRRMCPPTTLSKAEEQLLAEWINAYAKKGFQLRRRTLFEKVKNIIETDKRPNPFTNSTPWENGLKDSCEGSVPFLSGMQRLSKQQEQQCRRTTYRPSSNFMQQPNPNLGGQPNFNFMPPPSSNFKRQPSFPPTSNAGAVSSGPVGLVCNLNPFDGTVSWSDYRIQFEIVARNNNWSEQEKADAMATQLRGNAPSVLSVFPPGHRIQYGELIALLEQRFGVDSYSSQVQFCGRSQGARESFANFALELQRLATTAFPSCPTDVVDRMAELRFLEGIRDDELRTLVRVRGPKSLHEAVNAAQELATGINVGRNARVHVAQASANKRNYGRRRKPTKNVVTAGEQEAIRFVYSSFPYRDPTRSFNRFGKRINIDPQGHQSMNIPPAPNNRNHADDPAEFLAITPSSQTISEILNNEPPSSERPEAMENQLEVTIQAVGPSKDSLTVQGLLNEKPCSFILDTGATVSIVHPTFLSRSSLTKLEKSHVVIRSVTGSRIDVLGRLKVELHLGTYRVHHTMLVAHIEPLCILGVDFLDGNNCRLDFERNVLQIGNGTVNLSKPDYPEIKINLQESILLTALSETIIPVNRKRNVEDGPILLLDPRPDLPYGIHAARVLVESKAENIPIRFINLSATDVFLPRDSFIGCLEPVIIVNAVAYTSDAELDPLGVILNGVPEGLSSEDKQQLNSLLDEFRDIFSTGPSDVGRTGITKHHIDVGEAKPFRIPPRRVPLAKRAEAEQLVQEMESNNIIRPSNSPWASPVVLVKMKDGSTRFCVDYRRLNDITKKDSYPLPRMDDTLVSFSGSTWFSTLDLQSGYWQVEMSEQDREKTAFATGAGLWEFNVMPFGLCNAPATFERLMDGVFRKLGTETALVYLDDIIVHGRDIEDQLANLRKVFQRLRAANLKISPNKCHLLSPEVKYLGHIVSATGLQTDPNKTDTIQNWPVPKTKKEVRSFLGLASYYRRFVQDFSTIAKPLSELTEDKRKFLWEKRQQDAFEELKLRLISPPILSFPQAKGEFILDTDASQTGIGAVLSQVQDGNEKVLEYYSKTLSKPKGNYCVTRKELLAVVRATSHFHHYLFGRPFRIRTDHASLRWLLNFKDPDGQLARWLERIQQYDFVIEHRPGRKHLNADALSRQPCENCVHCDQKENREQTQLVDLVAIEPAFDLASEQDRDSTLRIVKSWLQQNQRPSREQGIIATSGRCFTLHQARAPGHPCKKGGHFGVRKTVEKIKERWYWPTLQADVEIWCAKCPLCHSKRGPARKTRGNLQIYNVGAPFERIAIDVLGPLPKTDRGNKYVIVVIDYFTKWPEAFATPDQKAETIADGFIENVLTRFGMPFQLHSDQGRNFESDLLQVILQRLGIEKTRTTALHPQSDGMVERFNRTLLDYLSKFVSTSQTNWDQFLPFALLAYRSSIHESTKFTPARLNFGRELRLPSDLSYGPSPGGCNTAVDYAERLTQTLEKIHSLTRKHLTLSSYQMKTQYDLRAHPLQFSEGEQVWIYNPKRRKGKSPKLQRDWEGPGTVLSKLNDVLYRVEFPGGRVKKVLHIDRLAKFCSEETRANNTFSVGVDSSVDNTNAISCIAPWVKYSKPAVPNFLRKCGFKIGKGLGKNLQGKVEPITVRSRTSRAGFGAKAQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-