Druf007209.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- CAWUPM010001024.1:362038-363986[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 6.1e-10 1.9e-07 33.3 0.0 2 38 16 52 15 58 0.88
Sequence Information
- Coding Sequence
- ATGGTACGGAAGTATGTTAGGAAAACGCAACGGCAGAATTGGTCGGAGAATAGCATGCAAAGTGCTATCGATGAAATATTGAGTGGTAAAATCGGATTTAAGAAAGCCGCCCAAGCGCACAACGTTCCTCAATCAACATTAGAAGATAGGATGAGAAAAGTGAAACAGGGTGTGATATCCATCGATAAGGCTGCGAAGAAAGGTATGGGAAAATTCAAAACTGTTTTTACAGCAGATCAAAAAGAACAGCTCAAGGATTATTTAAAAACAATGGAGGCAAGATTATTTGGGCTGACTACAAAGGACCTGCGACGTTTGGCCTTTGAGCTAGCAGAAAGAAACCATCTTACACATAATTTCAATCGGCAGGAAGGTATGGCGGGTTCTGATTGGCTTAAAAATTTCATGAAACGGCATCCTACTTTATCACTTCGAGCTCCTGAACCAACATCGGCCGCAAGAGCAATGGATTTTAATAAGCCAGCGGTGGATAGCTTTTTTAAACTACTCTGTGAGCTTATGGACCAATACCATTTTACCccagaaaaaatttttaatgtagaCGAAACGGGAATATCAAGCGTTCCGAAAAGTCAGTCAAAAATAATTGCTGAAAGGGGTCGTCGCCAAGTCGGTGTTTTGACTTCAGGTGAAAGAGGCCAGCTCATAACTGTTGAAATTTGTTGTTCCGCTGCCGGCCACTTTGTTCCACCTTTAATGATTTTCCCTAGGAAAAGAGTGAAAGATGAGCTAAAGGACGGAACACCTCCGGGGACAAAAATAGTGTGCCATGAAAGTGGGTGGAAGCAGGCTGAAATATTTGTGCAGTCGTTGAAGCATTTCTGCAAATACATAAAACCATCAGTTGACGATCCTGTACTTTTATTGCTAGACGGCCATGCGACCCACACCAAAAACTTGGAAGCGATTGATTGGGCGCGAAAAAATGGGATTATTTTGTTGTGTTTTCCCCCACACTGCACGCATCGCTTACAACCCTGCGATGTAAGCTTCATGGGACCACTAAGCGCATATTACAGCCAAGAAGTTAAAATTTGGCTTCGTAATAATCCTGGTCGTGTTGTTACTCAATACCAAATTGGGAAACTCTTCGGTACTGCATATTCTAAAGCAGCTACTCTTCAAATTGCTATTTCAGGCTTGCGGAAAACAGGAATTTGTCCAACGAATCCCAACATATTTTCTGACCATGACTTTTGTCCTGCCGAAACAACTGACAATGTGCTACCTGCTGCTGTTTCTACTGTTTATGCAAAGGAAGTTCCTCCCACTACGTCAGACCGAATGAATTATACTGAACCGAATAATCGTCGCATTTCAGTGGAAGAATTAGTCATCGATCAACAACCATCAACCCCGTCAAGACTTTCTAGATTGCAAAGTTCCGTTCTTTCTTCAAGACCAGGACCTTCGGGGTTGAAACCCCAGCTTTCATCTCCGAAACCGGGACCTTCTAGcctacaaaaaaaatttgtgtttccCGAAGATATTTCTCCTATCCCAAAGGCTACCAGGATGAAGATTTCGAAGAGAAGAGGAAGAACGGTGATATTAACCTCCTCCCCGTATAAGACAGAGCTTCAGAATAATTTAGCACAGAAGAATAAACGCAGTAAGGCTAAGGTCACAGAAAAAGATGACAATTGTTTATATTGCCAAGAGCAGTATTCAACAACCAAAAAAACAGATGGATGGATTCAATGCCTTGCTTGTCGCCTATGGGCACACGAAAGCTGCACATGTTTAAAAGAAGAAGATTTGAGCGACTTTAAATGCGATAAGTGCACAAGAACTACTAAGCCCGGTATTGCCCCATACGGCACACGATCCTGCCCCATACCCCGGGGCAAAACCATTTTTTGA
- Protein Sequence
- MVRKYVRKTQRQNWSENSMQSAIDEILSGKIGFKKAAQAHNVPQSTLEDRMRKVKQGVISIDKAAKKGMGKFKTVFTADQKEQLKDYLKTMEARLFGLTTKDLRRLAFELAERNHLTHNFNRQEGMAGSDWLKNFMKRHPTLSLRAPEPTSAARAMDFNKPAVDSFFKLLCELMDQYHFTPEKIFNVDETGISSVPKSQSKIIAERGRRQVGVLTSGERGQLITVEICCSAAGHFVPPLMIFPRKRVKDELKDGTPPGTKIVCHESGWKQAEIFVQSLKHFCKYIKPSVDDPVLLLLDGHATHTKNLEAIDWARKNGIILLCFPPHCTHRLQPCDVSFMGPLSAYYSQEVKIWLRNNPGRVVTQYQIGKLFGTAYSKAATLQIAISGLRKTGICPTNPNIFSDHDFCPAETTDNVLPAAVSTVYAKEVPPTTSDRMNYTEPNNRRISVEELVIDQQPSTPSRLSRLQSSVLSSRPGPSGLKPQLSSPKPGPSSLQKKFVFPEDISPIPKATRMKISKRRGRTVILTSSPYKTELQNNLAQKNKRSKAKVTEKDDNCLYCQEQYSTTKKTDGWIQCLACRLWAHESCTCLKEEDLSDFKCDKCTRTTKPGIAPYGTRSCPIPRGKTIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00453217; iTF_00454531; iTF_00454505; iTF_00453197; iTF_00453198; iTF_00453200; iTF_00453201; iTF_00453338; iTF_00454501; iTF_00453192; iTF_00454511; iTF_00454514;
- 90% Identity
- iTF_00454514;
- 80% Identity
- -