Druf081820.1
Basic Information
- Insect
- Dioctria rufipes
- Gene Symbol
- -
- Assembly
- GCA_963924295.1
- Location
- OZ002743.1:82026332-82027747[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 5.3e-14 1.6e-11 46.3 0.0 2 43 269 310 268 311 0.94 2 3 0.38 1.2e+02 5.1 0.0 27 39 340 352 319 358 0.84 3 3 3.1e-16 9.6e-14 53.4 0.0 5 40 378 412 377 417 0.92
Sequence Information
- Coding Sequence
- ATGAACCACTTAAAGTGGATGGGCCACACGTCCACTATCTTTGAAATCCAAAGAAGCCTTTATGATGATGCCAACACATGTGACATTGCCATTTCCTGCGGTGGAAAAATCCATCGGGCTCATCGTTTTATATTATGCTCTTGTAGTGATTATTTCCGGGATATGCTTTTGGATATTCCGCTAGGACAGGATACGACAATTATAATACCTGACCTTAGAGAAATAATTCTGGAAAAAGTactcaatttcatttatttgggtGAAGTTTCTGTCCGCTCTTCAAATTTATCAGAATTCCTTGAAGCAATGAATCTTCTTGGGATCAAAAGTGCTATCAGTTTTGATTGTCATATGAACAAAAAGAAACCACCCAATGTTTTGGTTTCCGTTGAGGAAGAACCTATTGATGTTGATAAGGCTACTGCGGACGATGAGGAACCTGGACCCGTAGAACCATGCGCCACAAAAGATTTTGAGTATTTGGAAGTTTATAATAATGAAGAAGCAAAAGTTGGACAGTTCACTATAGAACACATCGAGCAAGATTCCAATGGTGATTACATTTTAACAGAGAACTCAGAAAACTCATTTCCCTTGGGCGAAGAAAAGCCACAATTAGAAGCCAAACACGAAGAAGAGGCAATGGAATTTACAGAAGAGACCGCAACAGATGATATTGTTGTTGCATTGAAGGAGGAAGAGGATGAAGAGGACGAAGACGATAAATCAATGAATGGAAATGAAAATGGAACCGAAAATGAAAAAATGGATAATACTGCTTTTAATGAACTTATGCAATCAAGAAATGATGCATTCAATGGAGCTGTACGCTCAGTAATTGAATGCGGAATGAGCCTTCAAAAAGCTGctacaaaatataatatatcGAAAACAGTTTTATGGAGACGTGTCAGGAAGCACCCACAATACCGCATCTATAGGGAGAATCCACTTCTTGAATCGGCAGTAGAGAAACTTCAGAAGGGTGAATCATTGAAGAGCATTAGTCTTGCGCTTGAAATTCCCATGTCTACGCTTCATCGCCATAAAATGCGTTTGTTGCAAGAGGGTCGACTTCCAGACCATATTCAAGTGAAAAAACGTGATTCAAAAGAGACCTTAAAAATTAGATTGGCAAAAGCTGTTGAAGCCTGCAGTAATGGAATGTCTCAGAACCATGCTGCCAATGTATTTGGGGTGCCTAAATCGACTTTATGGCGACATTTACAAAAGCAAAAAGAGAAACTTAATATTATTGAAGATGACGGTGATGTATCCATATCTCTAGCTACATTGACGAAAGAACAGATTAAAGAAGACAAGACCGAAATTATCTGCGAAGTTTCTTTGTCCagttaa
- Protein Sequence
- MNHLKWMGHTSTIFEIQRSLYDDANTCDIAISCGGKIHRAHRFILCSCSDYFRDMLLDIPLGQDTTIIIPDLREIILEKVLNFIYLGEVSVRSSNLSEFLEAMNLLGIKSAISFDCHMNKKKPPNVLVSVEEEPIDVDKATADDEEPGPVEPCATKDFEYLEVYNNEEAKVGQFTIEHIEQDSNGDYILTENSENSFPLGEEKPQLEAKHEEEAMEFTEETATDDIVVALKEEEDEEDEDDKSMNGNENGTENEKMDNTAFNELMQSRNDAFNGAVRSVIECGMSLQKAATKYNISKTVLWRRVRKHPQYRIYRENPLLESAVEKLQKGESLKSISLALEIPMSTLHRHKMRLLQEGRLPDHIQVKKRDSKETLKIRLAKAVEACSNGMSQNHAANVFGVPKSTLWRHLQKQKEKLNIIEDDGDVSISLATLTKEQIKEDKTEIICEVSLSS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00455203; iTF_00453133; iTF_00453822;
- 90% Identity
- iTF_00455203; iTF_00453133; iTF_00453822;
- 80% Identity
- iTF_00455203;