Basic Information

Gene Symbol
ARID5B
Assembly
GCA_963924295.1
Location
OZ002740.1:21646087-21662451[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.2e-14 2.3e-10 43.3 0.2 2 89 499 579 498 579 0.89

Sequence Information

Coding Sequence
ATGTGGGGCTTCAAATGGGATGAAGGAGATCTCACACCAAGAGAAGATGGTCGAGTTTACAATTTTTGGTGCAGAAAATTGGTGGTAGGAGGACCTTGTGGATTCCATGGCCCATATACATTTTATAAAGGATTACAAATAATTCCGCCAATAAATGTAGGCACCTCCAATAATACAATTCTGAACAATAGAAATCATCAAGTAAATCTACATCAACATGCTGCTAATCCACAACCGAATCAGccgattcaaaattcaaaatgtaaGCCTGCCACAAGAAAATGTGTGAGCGAAAAACGACCAGATCTTAATGGCTCTTCGCAGGTTGATAAaggATCTTATAAACCACTCGTTCTGGCGATTGGAGATTGCATTCCAGTAAGACCATGGTCAGATTCACCGATTGCTTGTTTAGCAGAAATTCGAATGATTTGGCGAGACAAGACTGAACAGTCACTTCTCACTGGTCTACGATTATATTTTTTACCAGAAAATACGCCAATGGGGCGTAACTGTCACGGAGAGGATGAAGTTGTTGCAATCTCTGATAAAGTTGTAATCCGTGCCGAGGATTTATTAAATTGGTTCGATGATAAACTGGAATGGAACTGGGGACTTGTGTGGAAACAATTAAAAACAGCAGCACCGgagaaaatcaaaaatcaaactctcaCCAACAATGGCGGCAGTAAAACGGTTTCGTTGAAAAATTCCCAAATCGATTTTTCAGATGTGGAAAAAGAAAAAGTCTCAGAAGAAAATGCCCGAACGAAAATCACAGTCTTAAGTTATCCACGATATTGTCGATATAGAGCAACAATAAGACGTCTCGAGGATGACACATGCGATGATTGGTTAAAAAGTTCAATTGTCGCAGCTCTATGCGGTTTCTCATCACCATCATCCGATATGCGTGTAATGTTTTGCAGAGATACCTTCGATTATCCAGAACTTGAAACGCATGAGCTTCTTTGCAATCATCTAGCACCGAAACTAAAAGGACGTCCACGTGGACGAAAAAAGAAATCTCGTTCACAATCGCCATTCTCCAATGGAAAGAAAGCAAATGATTCTGGTAGTGAATCAAATGAATCAGATATTTCGATATTTTCAATTGGaaagAGTACTACAGTTAAAGTCCAGCCTCGACCGCATTTACGTTTCAATCACAGACCTGCTAGAAGTAAACTAAAATCAGAATCTGAATCTAAACCACTACCATCAGTACCACCACATAAGAAATTAGAAGTGAAAAAGGAAGATGAAAAGGAAATTGTTAGTATGGAAAAGAAGCAGCTGCCACCAATGCTGCTGTTGCCACTGTCGTCGCCTGCTGTTgctaaagaaataattaataaaaagagtAACATTGAAAAGAAGCAACAATTCATGAAGGCgacaaaatatattgaaaaacatgAAATTCTTTCGAAAACTGTTACTGCACCAAGTAATAAACCCATTTCCTCAACTTGTAATGATTGCCCTGCCGAAGAGAAATTCTTTTTGCGTAAATTGCATGAGTTTCATATTAAACAGAACAACAACATACCAAAGATGATCTGGGTGAACTTGAAAGGAGTACATTTGTATGCGATATTTCGTCAGGTAAAAAAACTCGGCGGCTATGATGCTGTCACATTAAAGAAACAATGGAAAATTCTCTTCGGTGAGAATAGTCCACCTCATCTTACTATAACACGACGTAAATATGAACGTATATTATTGCCATTGGAAAGATCTGAGTTAGTAACCAAAAAGACGACTTctacaacatcaacaacaacaacaacaaaacctgAAATCAAAAAGGAACCTACTGAGATTGAAGAAAAACTCCTTAAAGTTCCTAGCctaaaagtaacaataaaaaaagagaaaagtccTGAGTCTGAATGTAAATCTGAACCGGAATTAAGTAGAGAAGAAATGAATGAAATACAAAAGAGAGTCAAAGCAAAGCAAGCAGCTCATTATGTAACAAAGAAATGCACCAGCGATAATATTAATGAATCTACTAAGCCTGTACTTGTCGTTGATAATCCGCTTCTAACAATACCAGTTGTATCAACAACAGCTGAAAGTAAAATTTCCGTATCCTCATCGACAAGCGGTGTACAACCTGTTTCTGTTCCTGTTACCGTAATTGTTGGAACTGCAGAATCTAGAAAAACTTGTAGAACATCTGtgaatgatgataatgatgatgatgatgtagatGATGATATAAAACCAATAATAACTTCTTCCTCCTCAAGTTCAACAAAAACCACCGtttcaacatcatcatcatctcaAAAAATTGAAATACAACAGCCGCACACAACAATTACTGTTCATCAGACAACAATACATCCGCAAACGACACATTCCAAAATCACAACAActcaaaatcaaattacaaatcAAATTCAGATAACTAATCAAatacaaattcaacaaataacAGTACAACCGAATCAAAATGATTCTTCATcctcatcaacaacaacaacaacagtcgGAGGTGGATGTAAAGGTAGCGAATTTCGTTGTAATATTAAACAGGATAAAGATGGACAagaagtgaaaattgaaaatcgaGATACAACTAGTCCCATAAAGCAGCAGCAACAGtcacagcagcagcagcagcaacaacaacaacaacaacagtatcatcatcatcgtcatcatcatcatcaccgaGGAGAAGATGATTGTAATAAACGTCAACGGCAAAATATCCGAGTTAAGACTGAAAAAGTtccttttgaaaaagaaaatattccttTTATAGCAGCCGGTACGACTATCACACCTGTGATATCGCAAGTATCTACACCTAAAAAATCTCCCGAGGTGATTGATCTAGTTGATAGTGATGGAGATGGATCATCATCATCAGGAAGTTCATTAACGAATCACATGAGACTGACTTGtaatagtagtaatagtagtagcAGTAGTAATAATAGTATAACAGAAACTAACACAATTCTTCCGCCAGTTAAAAGAAGGAAATTAGATATTTTACGTGAAGGTGGTCTTGAAGTTACCGCTATAAGTAATACACATGGAGTAATTTCAACTTCATCATCTACGCTACCGCCACCTGTATCACTTCGTGTTCCATCACGTTTGCCTAGTACTACACCAACaacaactactactactaccaccAACAACAATAAATTAGAAAGAAGTCAATCAGAAGAAGATAAATATAATCTTCCATCATCAACAAGTATAACCATTCCGAAGAACAATGgcggaggaggaggaggaggaggaacaAATGATAACAACAGTAAAATGCCGAAATTGCAATCGAGCACCAGCATGTACACGAAAACAGGTAAAATATTTGGAAATCCTAAAGACATTCTACCACCATCGCCTACGCCTTCTGGACACTGTGAGGTTTTAGATCTTACAGTTAAATCACCAATAAAATTTCCAACATTGGAAATTCATTCGATACCTTCAGCACGACACGCAAGATCTCCACCACAAAATAAACCGCCGCCCTCTATAACGGCAATAAATTTGTCAAACACTAAACCAAAATTGTCAGATAGTGGACTACAAATAACATTGGTGCCATCGCAACCATCACAACAACAGAAACCTCTAACACATACGCAAAATGTTTACAATTCACAAAATCATAATATAAAGCGAAAAGCTGTTGATATTATGCCTGCTCCAATATTACCGCCGCCATCACGTCAAATTCCaaaacagcagcagcagcagcaacaacaacagcaacaacagcaacagcagcaacaacagcaacagcacgTAACACCACcacaaaaatttgttaaaaaaggCAATTCACCAGTTCCAGTACAAGCTTCTTCGAAATCTTCATTGCCGAATGTTTCGTCGAATATTACAGGCGGAAGTAATACATCTACCTCCTCCTCTTCCTCATCCTCCTCCCCATCATCCTCATCCGCATCTTCAAAGACACCAGCATTTCCTTTTCCACCTTTTTTGCCACATTTAGCCGCTGCGGCGCCTAATCCTTTTTTACCAATGCTAAATCCTATGCTCCTGTCTAGCTTGTACGCCCAAACTCCGAATCTATTTTTGCCAAATCAAATTCCGCAGGAATTGCTGCAACTTTATAAGAATTTGCCCGCTGAAATGGGTGTTGTACCAATTTCTAAGAGCTAA
Protein Sequence
MWGFKWDEGDLTPREDGRVYNFWCRKLVVGGPCGFHGPYTFYKGLQIIPPINVGTSNNTILNNRNHQVNLHQHAANPQPNQPIQNSKCKPATRKCVSEKRPDLNGSSQVDKGSYKPLVLAIGDCIPVRPWSDSPIACLAEIRMIWRDKTEQSLLTGLRLYFLPENTPMGRNCHGEDEVVAISDKVVIRAEDLLNWFDDKLEWNWGLVWKQLKTAAPEKIKNQTLTNNGGSKTVSLKNSQIDFSDVEKEKVSEENARTKITVLSYPRYCRYRATIRRLEDDTCDDWLKSSIVAALCGFSSPSSDMRVMFCRDTFDYPELETHELLCNHLAPKLKGRPRGRKKKSRSQSPFSNGKKANDSGSESNESDISIFSIGKSTTVKVQPRPHLRFNHRPARSKLKSESESKPLPSVPPHKKLEVKKEDEKEIVSMEKKQLPPMLLLPLSSPAVAKEIINKKSNIEKKQQFMKATKYIEKHEILSKTVTAPSNKPISSTCNDCPAEEKFFLRKLHEFHIKQNNNIPKMIWVNLKGVHLYAIFRQVKKLGGYDAVTLKKQWKILFGENSPPHLTITRRKYERILLPLERSELVTKKTTSTTSTTTTTKPEIKKEPTEIEEKLLKVPSLKVTIKKEKSPESECKSEPELSREEMNEIQKRVKAKQAAHYVTKKCTSDNINESTKPVLVVDNPLLTIPVVSTTAESKISVSSSTSGVQPVSVPVTVIVGTAESRKTCRTSVNDDNDDDDVDDDIKPIITSSSSSSTKTTVSTSSSSQKIEIQQPHTTITVHQTTIHPQTTHSKITTTQNQITNQIQITNQIQIQQITVQPNQNDSSSSSTTTTTVGGGCKGSEFRCNIKQDKDGQEVKIENRDTTSPIKQQQQSQQQQQQQQQQQQYHHHRHHHHHRGEDDCNKRQRQNIRVKTEKVPFEKENIPFIAAGTTITPVISQVSTPKKSPEVIDLVDSDGDGSSSSGSSLTNHMRLTCNSSNSSSSSNNSITETNTILPPVKRRKLDILREGGLEVTAISNTHGVISTSSSTLPPPVSLRVPSRLPSTTPTTTTTTTTNNNKLERSQSEEDKYNLPSSTSITIPKNNGGGGGGGGTNDNNSKMPKLQSSTSMYTKTGKIFGNPKDILPPSPTPSGHCEVLDLTVKSPIKFPTLEIHSIPSARHARSPPQNKPPPSITAINLSNTKPKLSDSGLQITLVPSQPSQQQKPLTHTQNVYNSQNHNIKRKAVDIMPAPILPPPSRQIPKQQQQQQQQQQQQQQQQQQQQHVTPPQKFVKKGNSPVPVQASSKSSLPNVSSNITGGSNTSTSSSSSSSSPSSSSASSKTPAFPFPPFLPHLAAAAPNPFLPMLNPMLLSSLYAQTPNLFLPNQIPQELLQLYKNLPAEMGVVPISKS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00453018;
90% Identity
iTF_00453018;
80% Identity
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