Basic Information

Insect: Dioctria linearis
Gene Symbol: L
Assembly: GCA_963930735.1
Location: OZ005740.1:11997885-12014655[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.9e-06 0.0023 20.9 1.7 1 23 164 186 164 186 0.98

2 17 0.39 1.8e+02 5.4 5.7 1 23 192 214 192 214 0.98

3 17 2.1e-07 0.0001 25.2 3.1 1 23 220 242 220 242 0.99

4 17 1.8e-05 0.0083 19.1 0.2 1 23 248 270 248 270 0.98

5 17 0.84 4e+02 4.4 0.2 10 23 336 350 327 350 0.88

6 17 0.018 8.4 9.6 0.1 2 23 371 393 370 393 0.95

7 17 0.052 25 8.2 0.5 1 23 481 503 481 503 0.95

8 17 0.0034 1.6 11.9 3.1 1 23 512 534 512 534 0.97

9 17 0.0042 2 11.6 0.3 1 23 542 566 542 566 0.87

10 17 0.18 83 6.5 0.9 1 23 601 624 601 624 0.97

11 17 0.0013 0.6 13.3 2.9 1 23 656 678 656 679 0.96

12 17 0.00092 0.44 13.7 4.6 2 23 846 868 845 868 0.96

13 17 0.11 51 7.2 0.1 1 23 874 896 874 896 0.92

14 17 0.088 42 7.5 0.5 2 23 904 925 903 925 0.96

15 17 1.2 5.7e+02 3.9 0.5 2 23 1009 1030 1009 1030 0.95

16 17 0.0006 0.28 14.3 0.0 1 23 1040 1062 1040 1062 0.98

17 17 0.074 35 7.7 0.3 1 23 1069 1091 1069 1091 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.9e-06	0.0023	20.9	1.7	1	23	164	186	164	186	0.98
2	17	0.39	1.8e+02	5.4	5.7	1	23	192	214	192	214	0.98
3	17	2.1e-07	0.0001	25.2	3.1	1	23	220	242	220	242	0.99
4	17	1.8e-05	0.0083	19.1	0.2	1	23	248	270	248	270	0.98
5	17	0.84	4e+02	4.4	0.2	10	23	336	350	327	350	0.88
6	17	0.018	8.4	9.6	0.1	2	23	371	393	370	393	0.95
7	17	0.052	25	8.2	0.5	1	23	481	503	481	503	0.95
8	17	0.0034	1.6	11.9	3.1	1	23	512	534	512	534	0.97
9	17	0.0042	2	11.6	0.3	1	23	542	566	542	566	0.87
10	17	0.18	83	6.5	0.9	1	23	601	624	601	624	0.97
11	17	0.0013	0.6	13.3	2.9	1	23	656	678	656	679	0.96
12	17	0.00092	0.44	13.7	4.6	2	23	846	868	845	868	0.96
13	17	0.11	51	7.2	0.1	1	23	874	896	874	896	0.92
14	17	0.088	42	7.5	0.5	2	23	904	925	903	925	0.96
15	17	1.2	5.7e+02	3.9	0.5	2	23	1009	1030	1009	1030	0.95
16	17	0.0006	0.28	14.3	0.0	1	23	1040	1062	1040	1062	0.98
17	17	0.074	35	7.7	0.3	1	23	1069	1091	1069	1091	0.96

Sequence Information

Coding Sequence: ATGTCGCTACACCATCTCCATCTCCGGTCGGAGTCACTTCCTGAATCAAATGAATTGAACGAAAGCCTCAAGTCACACTTACATTTATATTCAACTCACACCTCATCAAGCTACTCACCCTCTATGTCAGAGGGAGCAGCAACACCAAATTCTCTTGTACACCATCATCACCACCACCCATCGGAGGGAGATGATAATCGTCTTAGAAGTACTCACCGTCGTCGTCGCCGTAGAAGTACATCGGGAGCAAATGGATCTGCTGATGGTAAccttgatgatgatgatgatgatgatgaagatgaggtAGATTCAGGTGATGACGAAAGGGTTGCGACAACAAACTCTCATGAAGCCACCGAGGATGGCATCGATGAATTTAGTAATCTGGGCGACAGTAAAATCCCTGTTAAAATGCGAAAAATTGACAGAGATGCTATCAAATCGGAAAAGATGACAGTTGATGGCATTAAAACCGCCTCAGATGGATCCTATCAGTGTCAGTTCTGTGATAAATCATTTCCACGTCTTGGCTACCTCAAGAAACATGAACAGAGTCATGCCGAACACCTTCCCTTCAAATGTGAGTACTGTGCGCGATTATTCAAGCACAAAAGATCCAGAGACCGTCATACAAAACTACACACCGGAGATCGTCGCTATCGATGTCCCCACTGCGAGGCAGCATTCTCAAGAAGTGATCATCTTAAGATTCATATGAAGACACATGATAACCAGAAGCCTTTTCAATGTACGGTATGCAACCGGGGATATAATACTGCTGCTGCATTGACATCTCATATGCAGAATCATAAAAAGCAAGCGGCTCTTTTGGGTGGCGCTGGACATGCCTTGAATTATAGCCCACGTTCAACAGGATCTGGATCGAGTAACGGTAGTTTACATAAGCGACGATATGCAACAGCAGATAACAGCCCAAATCGAAGTGATTATCGCAAGCATGTACGAGGCTCCTACATTTCCTGCATTTATTGCACAAAATCCGATTTCACTTCATTAGAACAACTGAGTGCACACATCCAAACTATGCATGAAAAAGCTACTCCTAAGGATATCCACCACGCCCTAGCGAATCATTCATTATTCCAGCTATCTTGTGAATACTGCACAATGAAGTTTCCAAATATTCCCGCAATGTTACAACATATGAGAGCGACTCATGTTGATCGCTTGGCCAGTCCTAATTCCTATTTTGAACATTTCAACCGTTTGGCAGCATCTGGAACTTTTAGCCCCCGATTAGCCGCAAACACCCGATATGAGGAGGTTAAAGTGAAAATTGAAGATTCTAGTCCGCCTCATGGAAATCAAACAGAATCGGGAAAGAATGAAGAGCAAGTTGGTCCAACAGATCTTAGTCAGCCGAAAAAACGATCACAAACTCCATCCCAAGGATCGAATTCATCTGATAAGCCCGGTGCATTTTTGTGCAATCAATGCAATGCTGGACTTCCAGATTTTGATACATTTCGGACACACCTTAAAACACACATCACTCAAGGAGCAACTACCAATTTTGTATGCCACCATTGTACCCTAACACTGCGGGATCAAACAGAATACGAACGTCATGTAATTTCTCATTTCCTTATTTCAAGCTCTGAATATGCTTGCGCCAATTCATGTAGTAAAGTTTTTCCAAAATCAGACGAACTGCAGAAGCATTTATTTGAAACTCACGTTCAGACCATGTTTAAATGTTCACTCTGCTCTGATCTCTTCGATACGAAAGTTGCAATTCAAGTGCATTTCGCATGCGCGCATACAAATGAAAGCAAAATTTTTAGATGCTCTGCATGCATGGAGTCTTTCCGATTAGAAAAAGATTTCATCATGCACATAAAAACGCGGCATTCTAGTGCCGGATCAATTCAATGCATGTTTTGTCGTGCTATTTGTTCATCTGAATTAGAAATGCACTTCCATTTGGCTGCACATGCACGACAATTTCGTTGTCCATCATGTCCGGAAACGTTCCATGTTGAGTTCCTGTTGGATCGTCATATGCAAACACATCATGCACAAAAGGATGGAGCGGCTATTTTACCGGCGCCGAATGTATCGAATCCACTCTATCAGAGCCAATTCAATAAAACGCCTAACAATAACAATAACGTCCTGGACTATAACGCCTTTTCTGCTAACAAAAATTTATTCCCGCTGGCGGCGGGAAATAAATTTTACAGCCCATTACAAGTGGACACTACATCTCTGAATACATCTGGCAAGCATTCAGCTCTTATGTATGGACTGGGTCAAAGATATTTCGATACTAATAAAACTCTCTTGGATATGTACAACTATCATCAGGAGAAGTCTAATGCAAATTACTTTGTCAGTCCAAGCGGTTTCGAGAATAGCCGTACTCAAAAGGTACAACCTGATACTAAGGTAGCTGAGAGAACACACAGCGGTGGCTTCAGCTGTGGTATTTGTGAGCGGAATGACTTTCGCACAGAGGCTGAGATTCATTCGCATCGGAAAATAGTTCATAACTTGAAAACAGGTGTAAGCCTTAGATGCGCCTACTGCAGTGGGAATTTCAAATCTCGAAGTGAACTGGAGCATCACATGAAAACGTGTCACAATTCAACAGGTAAACACAAGTGTTTAATCTGTGACGAAATATTTCCATCGCCAGCGATCCTGGCGGAGCATAAACTACAACATTCCAAGGTTGGGCAGTCTGGTAAATGTTCTCATTGTTCGGCTGCTTTAAGTGATGTTTCGGCTTTCAAATCACATCTATCAGAGCACAACGTCGAAGGTCAAATCCCAGTGCAATGTATATGTTGCAGACAGACATTAAACTCAGATTTTGAAGTTGGACTTCACGCAAAGTTCCATACGAAATCATCTAATACACCTGAAAATCTATGCGCACTCTGCTTGGAGGCTATTCCAGCATCATCGGAGGCTCGAGTCTGCGAGAAATGTTGTCGTAAGCACAACCTAACCACTAAGTTCAATATGCGTTTCGAGAGTTCTCGCACTTACGTAGAGAATCGGTGTAATTTGTGCAAAATGATTTTACCTCATGCCCAGAGACTTCAAGAACATTTGATTGAGCACACTTTTGTTGGATGTGAAGAGCGGGGCTATTCCTGTTATATTTGCTCAGCGGTTTTTACAGTTCCAGCAGGACTGCTTAACCACATGAACGAACATGGTTTAAATGCCCGTCCGTATGACTGCAATCTTTGTTCGGAAAAGTATTTCTTTAGAGCTGAGCTAGATAATCACATCATTGAGCATGAGAATAGAGAAAAAACGGAAGTTAAGAATGAAGTGCCTCCTGAACAGCAGCAGCCACAGCCACAACCACAAccacaacagcagcagcagacaCCACCATCATCGCAtgaattacaacaacaacaattaaaagaaaattccCTAAAGATAATCAGTAATGGAGGAAGAAATGAAGTAAAAAGAGAAGTTATTGAAGACACCAAGCAagaagaggacgaggaggaataTATTGAGGTGGAAAAGATTGCTGACATCTCTGCAAATGAAGAGGAACAAGAGAATGAGGAATGA
Protein Sequence: MSLHHLHLRSESLPESNELNESLKSHLHLYSTHTSSSYSPSMSEGAATPNSLVHHHHHHPSEGDDNRLRSTHRRRRRRSTSGANGSADGNLDDDDDDDEDEVDSGDDERVATTNSHEATEDGIDEFSNLGDSKIPVKMRKIDRDAIKSEKMTVDGIKTASDGSYQCQFCDKSFPRLGYLKKHEQSHAEHLPFKCEYCARLFKHKRSRDRHTKLHTGDRRYRCPHCEAAFSRSDHLKIHMKTHDNQKPFQCTVCNRGYNTAAALTSHMQNHKKQAALLGGAGHALNYSPRSTGSGSSNGSLHKRRYATADNSPNRSDYRKHVRGSYISCIYCTKSDFTSLEQLSAHIQTMHEKATPKDIHHALANHSLFQLSCEYCTMKFPNIPAMLQHMRATHVDRLASPNSYFEHFNRLAASGTFSPRLAANTRYEEVKVKIEDSSPPHGNQTESGKNEEQVGPTDLSQPKKRSQTPSQGSNSSDKPGAFLCNQCNAGLPDFDTFRTHLKTHITQGATTNFVCHHCTLTLRDQTEYERHVISHFLISSSEYACANSCSKVFPKSDELQKHLFETHVQTMFKCSLCSDLFDTKVAIQVHFACAHTNESKIFRCSACMESFRLEKDFIMHIKTRHSSAGSIQCMFCRAICSSELEMHFHLAAHARQFRCPSCPETFHVEFLLDRHMQTHHAQKDGAAILPAPNVSNPLYQSQFNKTPNNNNNVLDYNAFSANKNLFPLAAGNKFYSPLQVDTTSLNTSGKHSALMYGLGQRYFDTNKTLLDMYNYHQEKSNANYFVSPSGFENSRTQKVQPDTKVAERTHSGGFSCGICERNDFRTEAEIHSHRKIVHNLKTGVSLRCAYCSGNFKSRSELEHHMKTCHNSTGKHKCLICDEIFPSPAILAEHKLQHSKVGQSGKCSHCSAALSDVSAFKSHLSEHNVEGQIPVQCICCRQTLNSDFEVGLHAKFHTKSSNTPENLCALCLEAIPASSEARVCEKCCRKHNLTTKFNMRFESSRTYVENRCNLCKMILPHAQRLQEHLIEHTFVGCEERGYSCYICSAVFTVPAGLLNHMNEHGLNARPYDCNLCSEKYFFRAELDNHIIEHENREKTEVKNEVPPEQQQPQPQPQPQQQQQTPPSSHELQQQQLKENSLKIISNGGRNEVKREVIEDTKQEEDEEEYIEVEKIADISANEEEQENEE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628637;
90% Identity: iTF_00455413;
80% Identity: -