Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005741.1:25757278-25796351[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.014 6.6 10.0 0.0 3 23 256 277 254 277 0.94

2 10 0.0057 2.7 11.2 0.9 1 23 285 308 285 308 0.97

3 10 0.027 13 9.1 0.3 3 23 316 337 316 337 0.96

4 10 9.2e-05 0.044 16.8 0.1 3 19 350 366 349 368 0.96

5 10 1e-06 0.00048 23.0 0.3 1 23 379 401 379 401 0.97

6 10 1.6e-07 7.7e-05 25.5 0.1 1 23 407 429 407 429 0.98

7 10 4.1e-06 0.0019 21.1 0.5 1 23 435 457 435 457 0.97

8 10 6.3e-07 0.0003 23.7 0.7 1 23 463 485 463 485 0.99

9 10 0.0001 0.048 16.7 4.4 1 23 491 513 491 513 0.97

10 10 5.9e-05 0.028 17.4 5.8 1 23 519 542 519 542 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.014	6.6	10.0	0.0	3	23	256	277	254	277	0.94
2	10	0.0057	2.7	11.2	0.9	1	23	285	308	285	308	0.97
3	10	0.027	13	9.1	0.3	3	23	316	337	316	337	0.96
4	10	9.2e-05	0.044	16.8	0.1	3	19	350	366	349	368	0.96
5	10	1e-06	0.00048	23.0	0.3	1	23	379	401	379	401	0.97
6	10	1.6e-07	7.7e-05	25.5	0.1	1	23	407	429	407	429	0.98
7	10	4.1e-06	0.0019	21.1	0.5	1	23	435	457	435	457	0.97
8	10	6.3e-07	0.0003	23.7	0.7	1	23	463	485	463	485	0.99
9	10	0.0001	0.048	16.7	4.4	1	23	491	513	491	513	0.97
10	10	5.9e-05	0.028	17.4	5.8	1	23	519	542	519	542	0.98

Sequence Information

Coding Sequence: ATGGCAACGATTTGCCGTTTATGTGCAACTTTAaagaaaattgataattttgttaACATCAATGACCCCAGCTTCAATTTGCCattgaaaatcaaaaaatgcTGCCAGCTTTCAATACCGGAGAATGATTCTCTGCCTCAAAATGTGTGCACAGAATGTGTTCGTTGTGTAGATGATTGCTGGAAATTCGTGACAAAAGTTCATGAAGCTCAGGAATCTTTGGCAAAAATTTTCCATCCCGATGATTTTTCACCTATGGAACAGAGTAACAATTTAGCAGAAAAGCTCAAAGTGAATGTCACAAAACTTGATATTGTCCGGGAAGGAGATTCAGGCAgagtagatgatgatgatgatgatgataatgaagaTGCCAACGTTTGTATGAAGCTGGAGAATTTCGATGAATCTATGTCAAAGCTTTTCCATTCTGATCACATTTCACCTATGGAACAAAATAAGAACTTATCGGAAAAACTGAAAGTGAGTGTTACTAAACTTGATATTATCCGGGAAGATTCAGACAGAGATAATGATACCAATGTTTGTATGAAGCTGGAAAATTTCGATGAGGCTGTTTATGAAATTGATGAAATTCATCTTGAAAACGACAATGATTACATCTCTGACGACGAGATTGGAGAGGAAGCAAATGAATTTCAAATCGAAACTATGGAAATTATTAGCGAATCTGAGGTTAATCAAGAGCAACAGGTACATCCACAGACCATTGAAAATGAAAACTGGCATACGTATCCTTGGATTTGTTTCGGTTGCCCTGTGGTTGTTTCAACTCCACAAGATCTTTGGAATCATTATTCGAAAAAACATAAAGATACTGGAATCTTGAAATATACTTGCGCAGATTGCTCTAAAACTTTGGACAAATACTATGCATTCATTAATCACGTCAAGTCTCGTCACCGAGAATATCTGTTGCTGGGATGTGATTTATGCGCGCGAACCTTTAAAAATGTCCAAGAGTTGTCGGATCATAGAATTTCTGTTCATTTGGAGGAAAATGATGGAGTGGATGGTTCGGTCCTTTGTAATATATGTGGAAAGGCATTCAAAAATCAGAATGCTTTACAAATGCATGCTTATTGCCATCAGCCGGATGATGTTAAGTATAAGTTTGCTTGTGAAGTGTGCGACAAGAAATTCGGATCAAAACCTAATCTAAAGGCACATCAGAAAATCCATGCAGGTCTCAAAGATTTCGTGTGTGATCAGTGCGGTAAGGGTTTCGTTCAGAAAGCCAACTTAGAAGAACACCTTAATACCCACATAAATGAATCTCCGTACGCATGTGGGGAATGCGATAAAAGgTTTAAGACACCAGCTCGTTTGACAAAGCACAAACAGGTTCATACCGATATAAAGCCCTACAAATGTGAAGATTGCGGTAAAGACTTTAGGGAAAAGGATACGCTTAAGGTACATTCAAGGATTCACACCGGTGCAATGCCATATGAGTGTGAATATTGTGGCAAGCGGTTTCGATTTAAGAGCGTTCTTTCGACTCACCGTCACCAGCACACTGGCGAACGGCCGTACTCCTGTCTGGACTGCAATCACCACTTCACAAATTGGCCAAACTATAACAAGCACATGAAGCGCCGTCATGgcATCAACACAAGCTCAACAGCACGTAAGCCGCAAACAATTCCACCCACTGGAATGCCATCAAATGCGAAACAACGGTACAAGGTACTGAAGTCATCTGCTACTGATTCGGCTTCCGATTTGGTCACGTCAACAGCGGAAATCCCCAATTTGGTATCTGATGACGATATAGATACTGGCACTACTAGTTCTACACTATAA
Protein Sequence: MATICRLCATLKKIDNFVNINDPSFNLPLKIKKCCQLSIPENDSLPQNVCTECVRCVDDCWKFVTKVHEAQESLAKIFHPDDFSPMEQSNNLAEKLKVNVTKLDIVREGDSGRVDDDDDDDNEDANVCMKLENFDESMSKLFHSDHISPMEQNKNLSEKLKVSVTKLDIIREDSDRDNDTNVCMKLENFDEAVYEIDEIHLENDNDYISDDEIGEEANEFQIETMEIISESEVNQEQQVHPQTIENENWHTYPWICFGCPVVVSTPQDLWNHYSKKHKDTGILKYTCADCSKTLDKYYAFINHVKSRHREYLLLGCDLCARTFKNVQELSDHRISVHLEENDGVDGSVLCNICGKAFKNQNALQMHAYCHQPDDVKYKFACEVCDKKFGSKPNLKAHQKIHAGLKDFVCDQCGKGFVQKANLEEHLNTHINESPYACGECDKRFKTPARLTKHKQVHTDIKPYKCEDCGKDFREKDTLKVHSRIHTGAMPYECEYCGKRFRFKSVLSTHRHQHTGERPYSCLDCNHHFTNWPNYNKHMKRRHGINTSSTARKPQTIPPTGMPSNAKQRYKVLKSSATDSASDLVTSTAEIPNLVSDDDIDTGTTSSTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -