Basic Information

Insect: Dioctria linearis
Gene Symbol: su(Hw)
Assembly: GCA_963930735.1
Location: OZ005741.1:230866160-230872130[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.016 7.4 9.8 2.2 1 21 85 105 85 106 0.87

2 12 4.4e-05 0.021 17.9 1.0 2 23 162 184 161 184 0.90

3 12 1.3 6.2e+02 3.8 0.5 1 23 190 212 190 212 0.92

4 12 6.4e-06 0.003 20.5 3.5 1 21 218 238 218 239 0.95

5 12 1.3e-05 0.006 19.6 0.5 2 23 252 273 251 273 0.97

6 12 1.5e-06 0.0007 22.5 0.5 1 23 283 305 283 305 0.99

7 12 9.2e-07 0.00044 23.1 0.3 1 23 311 333 311 333 0.98

8 12 1e-05 0.0048 19.9 0.9 1 23 339 361 339 361 0.98

9 12 0.00062 0.29 14.2 3.1 1 23 367 389 367 390 0.92

10 12 0.0001 0.049 16.7 1.1 2 23 396 418 395 418 0.96

11 12 0.00017 0.082 16.0 0.7 2 23 426 448 425 448 0.96

12 12 0.013 6.2 10.1 1.4 1 23 453 475 453 475 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.016	7.4	9.8	2.2	1	21	85	105	85	106	0.87
2	12	4.4e-05	0.021	17.9	1.0	2	23	162	184	161	184	0.90
3	12	1.3	6.2e+02	3.8	0.5	1	23	190	212	190	212	0.92
4	12	6.4e-06	0.003	20.5	3.5	1	21	218	238	218	239	0.95
5	12	1.3e-05	0.006	19.6	0.5	2	23	252	273	251	273	0.97
6	12	1.5e-06	0.0007	22.5	0.5	1	23	283	305	283	305	0.99
7	12	9.2e-07	0.00044	23.1	0.3	1	23	311	333	311	333	0.98
8	12	1e-05	0.0048	19.9	0.9	1	23	339	361	339	361	0.98
9	12	0.00062	0.29	14.2	3.1	1	23	367	389	367	390	0.92
10	12	0.0001	0.049	16.7	1.1	2	23	396	418	395	418	0.96
11	12	0.00017	0.082	16.0	0.7	2	23	426	448	425	448	0.96
12	12	0.013	6.2	10.1	1.4	1	23	453	475	453	475	0.92

Sequence Information

Coding Sequence: ATGGCACTAAATATTAAGGATGAAACTGtgattaaagtaaaaataaatatggaaaatgatgagaTAGAGCTTGTCGAAGAAAATAAAGTACTATACGATAACTACAATGACGAAACAGAACACTACATCATAAATGAAATTGGAAATTCTGATGTCGTTAAGTTAGTTATAATGGAAGATGACGAAGAAATTGACGAAGTAGCAGAAGAAGAAGCAGATGAGGAAACCGAAAAAATAAATGAAGTTATAGAACATGTTTGTGGCAAGTGCTTTCAAAGTTACAGCAATTTGAACCGTTTGAAGAggcatttgaaattttgtcgaACTCAAACCAAAATTGATAACACGCAAGAACAGAGTGAGTTGCGAAAAGAGATGGAAAATGACATCAACACAATCGAGGAAGAGGCAAAAGAATTGGAGACAAAAGATGTTTGCTTTTGTTGTcttgaaaattttgaaacttGTCATTCAGGTCACATACGATGTTACGAATGCCCGAAATCATTTAAAAACTCTAAAAGTTTTGAACGGCATGTGTTTTTGATTCATGCTGGAAATGAAAACTATCCTTGCAAAACGTGCAACGCAAGATGCCCTTCAATGGGAATTTTGGAACTTCATGAAAAGTCACATACTCGAGGCAAGCCATTTGCTTGTAAAAAATGCGGTAAAGAATTTACCCGAAGGTATCACTTGTATAGACATCAGCAGTTTTCAATTTGTGACAACCAAGCACccaaaaaagaaattgtatgCAAAGTTTGCTCCAGAGTGTTTTATCGTATAGACAACTTGCGAAGTCACTTGCGTCAACATTTAGCAGATGAGCCTAAGAATCGAGACTATAAGTGCCCATACTGTGAGAAGTCATTCTACGGAACAGCCACGTTAAaTATTCATATTCGAAGTCACACAGGAGAACGCCCTTTTCCTTGCGATTTATGTGAAAAAAGTTTTCCTTCAAATGCTGCTCTGAGAAAACATCGCCGATCTCATACAGGGGAAAAGCCATATCCATGCAAAAGGTGTTCTAAATCATTTGCTGCGAAAGAAGTTCTTAATCGTCATATGAAAACCCACACTGGCGAACGGCCACATAGCTGTTTGAGCTGTGGAAAAAGCTTCATACAAGCTACCCAGCTCAGAAATCACAACTTATTGCATCATAGCACTGAGCCAATCAAATGTAAACTTTGTGAGGAGGAGTTTTCTTCAAATCAAAAGTTAAAAAAGCACGTAAAGGTTACTCATTCTACTGCACCTGAATTGCAAAAGTGTGATTACTGCAATGAATCCTTCAAGACAATTGGAGGAGTTAGGAGACATATTTCTCGCACACACAAGACAGCTGAACATAAATGTCTAATTTGCAATGAAAAATTTTCGTCGAAGAAAGAAATTGACTTGCATTTGGTgcaacataaaaaagaaaaaattaaaaagatcaaCAGACTAGATTTATCTTCAGATTTTAAATCCAACTTACCGTTAGCTGAATATACTGTGAAGAAGATTGAATACGAAAACATAAAAACGGAGGATCTCGAttcaaatgttaaaattgaagaaTACACATTTGAAGAAAACACTGAAACAATggatgaaaattcaaaaatgtcaGATTCAGAAGAGAGTGATCATACCTTAATGGAAATCGATGATCCAGAAGATCCAGTTTTAGTCATGAATGAAACGAATTTAAAAAGTAACATTCAGAAACTTCTAGACTTGCTTCTCGACAAGGAAATTTTGGTTAAATTTGGATGGCCTTCAGCAAGTGTTGAAAATGTTTTACAGGAGGTCATCAAGAATTGTGGTCATACAACGAAATCTCTAGACAATATAGCGGATTACGCGACTAAGATGAGGGAGTACGTTAAGCTGTTATTTACAGTTGTTATTGATAATGACTCGATAAAACAGCTTCTTAACAATCACTCTATCGATGAAGTTATATACCAAGTGCTAAAAATGGCTAAAGTTAAATGA
Protein Sequence: MALNIKDETVIKVKINMENDEIELVEENKVLYDNYNDETEHYIINEIGNSDVVKLVIMEDDEEIDEVAEEEADEETEKINEVIEHVCGKCFQSYSNLNRLKRHLKFCRTQTKIDNTQEQSELRKEMENDINTIEEEAKELETKDVCFCCLENFETCHSGHIRCYECPKSFKNSKSFERHVFLIHAGNENYPCKTCNARCPSMGILELHEKSHTRGKPFACKKCGKEFTRRYHLYRHQQFSICDNQAPKKEIVCKVCSRVFYRIDNLRSHLRQHLADEPKNRDYKCPYCEKSFYGTATLNIHIRSHTGERPFPCDLCEKSFPSNAALRKHRRSHTGEKPYPCKRCSKSFAAKEVLNRHMKTHTGERPHSCLSCGKSFIQATQLRNHNLLHHSTEPIKCKLCEEEFSSNQKLKKHVKVTHSTAPELQKCDYCNESFKTIGGVRRHISRTHKTAEHKCLICNEKFSSKKEIDLHLVQHKKEKIKKINRLDLSSDFKSNLPLAEYTVKKIEYENIKTEDLDSNVKIEEYTFEENTETMDENSKMSDSEESDHTLMEIDDPEDPVLVMNETNLKSNIQKLLDLLLDKEILVKFGWPSASVENVLQEVIKNCGHTTKSLDNIADYATKMREYVKLLFTVVIDNDSIKQLLNNHSIDEVIYQVLKMAKVK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455373;
90% Identity: iTF_00455373;
80% Identity: -