Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005741.1:23766903-23771573[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 1.8e-06 0.00087 22.2 2.8 1 23 185 207 185 207 0.99

2 13 9.6 4.5e+03 1.1 0.0 7 20 217 230 212 232 0.86

3 13 2.9 1.4e+03 2.7 1.2 2 23 304 325 303 325 0.92

4 13 0.00059 0.28 14.3 1.3 1 23 402 425 402 425 0.97

5 13 0.075 35 7.7 4.1 1 21 432 452 432 453 0.95

6 13 8.8 4.2e+03 1.2 0.2 2 10 463 471 462 485 0.81

7 13 1.2e-05 0.0057 19.6 2.9 1 23 503 525 503 525 0.97

8 13 8e-07 0.00038 23.3 4.3 1 23 532 554 532 554 0.98

9 13 5.9e-08 2.8e-05 26.9 1.7 3 23 568 588 566 588 0.96

10 13 1.5e-05 0.0071 19.3 2.8 1 23 594 616 594 616 0.99

11 13 5.8e-07 0.00027 23.8 2.1 3 23 624 644 622 644 0.97

12 13 9.6e-08 4.5e-05 26.2 1.6 1 23 650 672 650 672 0.99

13 13 0.00097 0.46 13.6 0.3 1 22 678 699 678 702 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	1.8e-06	0.00087	22.2	2.8	1	23	185	207	185	207	0.99
2	13	9.6	4.5e+03	1.1	0.0	7	20	217	230	212	232	0.86
3	13	2.9	1.4e+03	2.7	1.2	2	23	304	325	303	325	0.92
4	13	0.00059	0.28	14.3	1.3	1	23	402	425	402	425	0.97
5	13	0.075	35	7.7	4.1	1	21	432	452	432	453	0.95
6	13	8.8	4.2e+03	1.2	0.2	2	10	463	471	462	485	0.81
7	13	1.2e-05	0.0057	19.6	2.9	1	23	503	525	503	525	0.97
8	13	8e-07	0.00038	23.3	4.3	1	23	532	554	532	554	0.98
9	13	5.9e-08	2.8e-05	26.9	1.7	3	23	568	588	566	588	0.96
10	13	1.5e-05	0.0071	19.3	2.8	1	23	594	616	594	616	0.99
11	13	5.8e-07	0.00027	23.8	2.1	3	23	624	644	622	644	0.97
12	13	9.6e-08	4.5e-05	26.2	1.6	1	23	650	672	650	672	0.99
13	13	0.00097	0.46	13.6	0.3	1	22	678	699	678	702	0.91

Sequence Information

Coding Sequence: ATGCAAGATTTGTCTACAATTAgtgaatttaatattgaaaaaacaTGCAGAACATGTTTAGTTCAATGCAATGAATCGAGCTCTCTGTTTAATACTTTTGGTGCCAGTGAGTTATCTCTTGCAGAGATAACGATGGCTTTTGCCCAAGTGGAGATTCTACAAAATGATAGTTTTCCCAATCAAATATGCAGTGATTGTACAAATCAAACAATTAACGcttacaatttcaaaataaaagtggagCAAAATGAGAAATTGCTTCTGAACTATATTGAAGAAATGCAAGGAAAAAATAGACAGGAAGGAACAAGCGATTCAGTCTTGGATGAAAAAGATTTTATGATTACAGTAAAAATCGAAACAGGTCCTGGTTTTCCGCAAAACCTAATAAAATCTGATACAGTTGTACTAAGCGATAAGGAACAACCAGAGAACATAGTTGAAGAGCAACAGTATAAAAATGAAAGCGAGTTTGAGGATAACGTTCCAATGGAAACAGTTCACAGTGAATCGGATGTAGATTTAGTGTCTAGTGCAAATGATACCCAGTATTTTCGTTGTGAATACTGCACGGAAACTTTTTCCCAGGAAAAAAATCTCTTCAATCATTTAAAAACGCATGCTGATGAACCTAAGTGCGAAATTTGGAACAAAGAATTTAATAGCAACGATCAGATCAACGCACACATTGAGCAACCACTGAAGCTAAAAATGTTCGATTGTTCCGAATTCACTGAGAAATTGGAATCAAAACCTCGACTGAAATTGCATCGATCGACTAATAATTTcaaaaaAAAACAATGCAAGCAAGCAGCACGTGACGATAGGCATCCCGAAGAAAGTGCTTTTCAAACTGAATTAAGTTTAGTCGACAATTCTGTATGTGAGCCGAACGGACGAAAAACAATTCATTGCAAACTATGCGATTCTCAGTTCAACAAAATTTCCATATTGAGAAACCATTTGGATGAGCACAAATCTCTCAAAAACTTTAATTTTGAGAATTGCgacttaataaaaattcattgtcTTAAAGAAGAGACCGATTTAAATAATGCTGTTATACAAATCGTCAGTGACTTGGAGCAGGGTAAAATGTCCAGATTTTATTCGATAGTAAACCAATCGGGAATTGAATTGCGACTGAGTGATTCTGAAACAGATTCTGATAACGATGACTTCGAATACAGAAGACATAGTTATTATGTTTGCGATGTATGCAGCAAAAGTTTTGATCGAAAATATAAAGCCTTGTATCATCAAAATAGCTCACATAACTATGAAGAGTTACCTCATCAGTGCTTCCATTGCACTCTGcgatttatttcaacaaaattgctgAAATATCACTTAAAGTCACaatgtaataattttgaaaaacagTTGAGCTGTCAGGAATGTAATATGAAATTTATGTGGCATGAAAATTTAGTCTTCCACTCCAATATACAGCACTCTTCATCAGCGAAGAAGGTTAAGAAAAAAGATCAGCCCAGGGAGAAATGTTTTACATGCAAATTCTGTGATAAATCATTTTATCGACAAGAACATTTGGATCGTCATGCTATCATTCATCAGCCAgatgagaaaaaatttgaatgtCCCACATGCCATAAAAAGTTTAATCGGAAAGATAACATGAAGTCTCATATGAAGATCCATAGGGATGATAGGGAAAAGGAAGATACAGATAAGCACCTCTGCGTGTATTGTGGAAGAAGCTTCTCCAATTCATCTAATTTAATTGTGCACATGCGACGTCACACAGGAGAAAAGCCTTATAAATGTGATTTATGTGATAAAGGTTTCCCGAGATCGTCAGATTTACAGTGCCATAGAAGGACCCATACAGGAGAAAAGCCCTGTTTATGTACAATTTGTGGAAAAGGCTTTTCTAGATCTAATAAACTTGCTCGACATATGCGGATACATACTGGAGTTAGACCATATAAATGCACTTATTGCGATCGGGCTTTTACTCAATCAAATGATTTAACCCTTCATATAAGAAGACACACAGGTGACAAACCTTATGTTTGTGGTATATGTGGAGAACGTTTTATACAAGGAACTGCTCTTCACACTCATAGACGTCTTAAGGGGCACTACGAAGAAGCAGCACAAGAAGTTCCATATTCTAGCATTAGCGTTAACAATCCCAACCGACTGAACTTTGCTAATCGAGTCGATCGAATTGGTATTCCTAAAGAATCAAACGACCGAGCTGCTATGGAAATAAAGCCTGTAGGTAGGAACTCCCGTGCAACTTTAGTAAAAAGTAATTGCGATCGTGATGCCATGGAACAAACTTGTATTACAACTTCTGAGTCAAACTGCACATCGAGCATTAAAGAGCCTAATCGCGTTTCCCCTTCTAACCAGGCAgttaaaaatatttcgaattatATGCAATCATCAGTTCCAGCTACAACCAACAGTGCCTTCTTAACTACGGCGGCTGCTCCTTTTGTTCAGCTAGAGGAGGGAGAATTTTTCACTATAACAAACCTTGGATACCAAACTTATCAATAA
Protein Sequence: MQDLSTISEFNIEKTCRTCLVQCNESSSLFNTFGASELSLAEITMAFAQVEILQNDSFPNQICSDCTNQTINAYNFKIKVEQNEKLLLNYIEEMQGKNRQEGTSDSVLDEKDFMITVKIETGPGFPQNLIKSDTVVLSDKEQPENIVEEQQYKNESEFEDNVPMETVHSESDVDLVSSANDTQYFRCEYCTETFSQEKNLFNHLKTHADEPKCEIWNKEFNSNDQINAHIEQPLKLKMFDCSEFTEKLESKPRLKLHRSTNNFKKKQCKQAARDDRHPEESAFQTELSLVDNSVCEPNGRKTIHCKLCDSQFNKISILRNHLDEHKSLKNFNFENCDLIKIHCLKEETDLNNAVIQIVSDLEQGKMSRFYSIVNQSGIELRLSDSETDSDNDDFEYRRHSYYVCDVCSKSFDRKYKALYHQNSSHNYEELPHQCFHCTLRFISTKLLKYHLKSQCNNFEKQLSCQECNMKFMWHENLVFHSNIQHSSSAKKVKKKDQPREKCFTCKFCDKSFYRQEHLDRHAIIHQPDEKKFECPTCHKKFNRKDNMKSHMKIHRDDREKEDTDKHLCVYCGRSFSNSSNLIVHMRRHTGEKPYKCDLCDKGFPRSSDLQCHRRTHTGEKPCLCTICGKGFSRSNKLARHMRIHTGVRPYKCTYCDRAFTQSNDLTLHIRRHTGDKPYVCGICGERFIQGTALHTHRRLKGHYEEAAQEVPYSSISVNNPNRLNFANRVDRIGIPKESNDRAAMEIKPVGRNSRATLVKSNCDRDAMEQTCITTSESNCTSSIKEPNRVSPSNQAVKNISNYMQSSVPATTNSAFLTTAAAPFVQLEEGEFFTITNLGYQTYQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455372;
90% Identity: iTF_00455372;
80% Identity: -