Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005742.1:261401437-261406532[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00068 0.32 14.1 3.1 1 23 128 151 128 151 0.96

2 13 0.57 2.7e+02 4.9 0.2 2 12 155 165 154 169 0.87

3 13 0.00043 0.2 14.7 0.1 1 19 220 238 220 238 0.98

4 13 1.9e-06 0.00091 22.1 3.5 2 23 340 361 340 361 0.98

5 13 4.6e-05 0.022 17.8 7.7 1 23 367 389 367 389 0.97

6 13 6e-05 0.028 17.4 3.6 1 23 395 418 395 418 0.94

7 13 0.00017 0.079 16.0 2.6 3 23 430 450 429 450 0.98

8 13 3.7e-05 0.017 18.1 0.5 3 23 457 477 457 477 0.99

9 13 1.7e-06 0.00082 22.3 0.3 1 23 484 506 484 506 0.96

10 13 1.6e-06 0.00075 22.4 0.7 1 23 512 534 512 534 0.98

11 13 7e-07 0.00033 23.5 0.7 3 23 542 562 540 562 0.96

12 13 7e-07 0.00033 23.5 1.5 1 23 568 590 568 590 0.99

13 13 0.00077 0.36 13.9 1.0 1 23 595 618 595 618 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00068	0.32	14.1	3.1	1	23	128	151	128	151	0.96
2	13	0.57	2.7e+02	4.9	0.2	2	12	155	165	154	169	0.87
3	13	0.00043	0.2	14.7	0.1	1	19	220	238	220	238	0.98
4	13	1.9e-06	0.00091	22.1	3.5	2	23	340	361	340	361	0.98
5	13	4.6e-05	0.022	17.8	7.7	1	23	367	389	367	389	0.97
6	13	6e-05	0.028	17.4	3.6	1	23	395	418	395	418	0.94
7	13	0.00017	0.079	16.0	2.6	3	23	430	450	429	450	0.98
8	13	3.7e-05	0.017	18.1	0.5	3	23	457	477	457	477	0.99
9	13	1.7e-06	0.00082	22.3	0.3	1	23	484	506	484	506	0.96
10	13	1.6e-06	0.00075	22.4	0.7	1	23	512	534	512	534	0.98
11	13	7e-07	0.00033	23.5	0.7	3	23	542	562	540	562	0.96
12	13	7e-07	0.00033	23.5	1.5	1	23	568	590	568	590	0.99
13	13	0.00077	0.36	13.9	1.0	1	23	595	618	595	618	0.97

Sequence Information

Coding Sequence: ATGGAATTTACcaacataaatttaaataaaaaagtttgtCGGACATGTTTACATATTGATAATAGTGAAAACCTTCACAATGTTTTCTCCAAAGAGAATTCAGATGAGATTATCCCTGTTACTGAAATGCTTGCGGAATGCTCCAATTGTCCgATAACAGAAGGAGATGCATATCCAAGTCAAATTTGCAGTAAATGCTTAGAAGTAGTGAAAATTGCCTACAATTTCAGAAAACAATGTGAAAAGTCTTACGATATCTTGACCGCTATAATTAACAATTGTAGAAATAATCAACAAAACAGTGGCGCTTTTCTTGAGTCCAGATTCGTCAGTGAATTGCTTGTTAAGTCTGAGGACACGGGTGCTGAAGTAATACTTTACTATTCCTGTGAGAAATGTGAAGAGAAATTTTTCAGCGTTCAACATTTAAAGAAACACATTAAAGAGAGTCACAATGAAAAGAAATGTCGAATTTGTTCGAAAATCTTCACTAGAATTAATCTTGAAGAGACTACTGATTCTTCGACAAAAAGTCCTGACTATTTACAAACCGTAGATGATGTATGCGAATCATGCGTTGACTTCTATTCACAATCAGATGAGATAAATAATTTCGAAGAAGATGAAAATAAGGATGGATCTGATATTCCGTGGCAATATATGTGTGGAGTATGTAACGAGACATTTTCTACGGAAGATCTTCTTAAAAATCATCCTTGTGAGGAGAATTGTGACACgtcAATAAAATCCGAAAAATCTTGTCTTGACGCAAGTTTTGAAGAAGCAGAAAATCCCCTTGGTGAAGAAATCTTCAGCATAACCAACAGATTAATAAATTCCGAAACGGACGGATTTGATATTCGTGATGATTATCGTGATCAAGACGAATGTTCCAGTACAAGTGATAGCAAACTACTTTTAGAACTGAAAGGTAAACCAGGAAGCTCAGCTGGCATGATTAAAAAGAAAAGTGGTAAGAAATATAAGAAATCAGTCAGTAAGATCGGAAGAATACCCAAATGTGATGTATGTGATAAAGTATTTTCAAGATCGACACACCTGAGACGGCACAGTCTGACACATTCAGGCGTAAAGCCATTTTCCTGTAAGGTTTGTAATAAAAGCTTCACGCGAATGGACCACTTAAACATTCATATGCATCATCACTCCGACATAAAACCGCATGTTTGTGAGATTTGCAAGAGAGGTTTTACAAGAGCAGAACatttaagaaaacacaaagaTTCACGTCATGGTGATAAGATGAAAACACCCAAAACAGAGTTCTGTGATATATGTAAAAAAGGATTCACTACTGTTAAGTACCTTCATATTCATATGAAAAGTCACACGGATCGCATTTGGGGCTGCAAAACATGTCCAGAGAAGTTTAAAACCAAACCAGAATTAACTGCACATTTAAAAATTCATGCTGCCAGTGAGAAACCATATTTATGCTCGGAATGTGGACTACGTTTTGTACGAAATGATTATTTGGTTATACATATGAGGCGACATAAAGGTGAAAAACCTTACAAATGTAAATTTTGTGGTAAAGGTTTTCCAAGAGCCACAGATTTAACTGTTCACGAAagATACCACACGGGAGAAAAGACCCATTTATGTACAATATGTGGCAAAGGCTTCCAACGTGCCTATAATTTACTCGTCCATATGAGAGTTCATACTGGTGAGCGACCTTATCAATGTCCACATTGCTCAAAACGCTTTGCTCAGGGAAATGATTTAAAGGCGCACATACGTCGTCACACCGGAGAACGATTCAAATGTGAAATTTGCGGGGATGGATTTATTCAGGGATATCATCTAACTCAGCACAAACGAAACGTTCATGGAATCGATATGAAGTCACACATTCGTCGGGTGGAAAAATTCGTAACAGTAGTTGATCAAAAGCAACAAATCGAAGTCTTTCAAACTGCATGCCAATTACCGAAGCTAGATCCGGATGGAACAGAAAACTTAGGCGAAAATGCTAAGGAGCAACCGACAGAAATTGCAGAAGTAGAGGTGATCAAAATCGAGGAGGAACAAGCAGAAGAACTAGAATTAGAAACAGAGgcCATTAGTTTAAACTCAGAACAAGCTGAAATGTTAGAGATTGGCCATGAAATTACCGTTGTAGATGGAGCTAGTATCACAAGGATATCTTATTTTAGTTCTCCTGAGGGGAAAGTCAAATTGGACTCATCGAGTGAATAG
Protein Sequence: MEFTNINLNKKVCRTCLHIDNSENLHNVFSKENSDEIIPVTEMLAECSNCPITEGDAYPSQICSKCLEVVKIAYNFRKQCEKSYDILTAIINNCRNNQQNSGAFLESRFVSELLVKSEDTGAEVILYYSCEKCEEKFFSVQHLKKHIKESHNEKKCRICSKIFTRINLEETTDSSTKSPDYLQTVDDVCESCVDFYSQSDEINNFEEDENKDGSDIPWQYMCGVCNETFSTEDLLKNHPCEENCDTSIKSEKSCLDASFEEAENPLGEEIFSITNRLINSETDGFDIRDDYRDQDECSSTSDSKLLLELKGKPGSSAGMIKKKSGKKYKKSVSKIGRIPKCDVCDKVFSRSTHLRRHSLTHSGVKPFSCKVCNKSFTRMDHLNIHMHHHSDIKPHVCEICKRGFTRAEHLRKHKDSRHGDKMKTPKTEFCDICKKGFTTVKYLHIHMKSHTDRIWGCKTCPEKFKTKPELTAHLKIHAASEKPYLCSECGLRFVRNDYLVIHMRRHKGEKPYKCKFCGKGFPRATDLTVHERYHTGEKTHLCTICGKGFQRAYNLLVHMRVHTGERPYQCPHCSKRFAQGNDLKAHIRRHTGERFKCEICGDGFIQGYHLTQHKRNVHGIDMKSHIRRVEKFVTVVDQKQQIEVFQTACQLPKLDPDGTENLGENAKEQPTEIAEVEVIKIEEEQAEELELETEAISLNSEQAEMLEIGHEITVVDGASITRISYFSSPEGKVKLDSSSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00455359;
90% Identity: iTF_00455359;
80% Identity: -