Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005740.1:34735128-34744365[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 20 0.0089 4.2 10.6 0.2 3 23 278 298 277 298 0.96

2 20 2.8 1.3e+03 2.7 13.2 1 23 304 326 304 326 0.96

3 20 3.8e-05 0.018 18.1 1.9 1 23 331 353 331 353 0.98

4 20 9.4e-06 0.0044 20.0 2.0 1 23 359 381 359 381 0.98

5 20 0.0012 0.56 13.4 3.6 2 23 388 409 387 409 0.97

6 20 3e-05 0.014 18.4 1.9 1 23 415 437 415 437 0.96

7 20 1.6e-06 0.00074 22.4 0.5 2 23 457 478 456 478 0.97

8 20 1.5e-06 0.00073 22.4 1.5 1 23 484 506 484 506 0.99

9 20 0.0025 1.2 12.3 0.4 3 23 634 654 633 654 0.96

10 20 2.8 1.3e+03 2.7 13.2 1 23 660 682 660 682 0.96

11 20 3.8e-05 0.018 18.1 1.9 1 23 687 709 687 709 0.98

12 20 9.4e-06 0.0044 20.0 2.0 1 23 715 737 715 737 0.98

13 20 0.0012 0.56 13.4 3.6 2 23 744 765 743 765 0.97

14 20 3e-05 0.014 18.4 1.9 1 23 771 793 771 793 0.96

15 20 1.6e-06 0.00077 22.4 0.6 2 23 813 834 812 834 0.97

16 20 1.2e-06 0.00055 22.8 0.4 1 23 840 862 840 862 0.99

17 20 0.00034 0.16 15.1 0.7 1 23 871 893 871 893 0.98

18 20 0.0034 1.6 11.9 3.1 1 23 899 921 899 921 0.98

19 20 0.00049 0.23 14.6 0.7 1 23 927 949 927 949 0.98

20 20 0.52 2.5e+02 5.0 0.1 1 14 955 968 955 976 0.77

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	20	0.0089	4.2	10.6	0.2	3	23	278	298	277	298	0.96
2	20	2.8	1.3e+03	2.7	13.2	1	23	304	326	304	326	0.96
3	20	3.8e-05	0.018	18.1	1.9	1	23	331	353	331	353	0.98
4	20	9.4e-06	0.0044	20.0	2.0	1	23	359	381	359	381	0.98
5	20	0.0012	0.56	13.4	3.6	2	23	388	409	387	409	0.97
6	20	3e-05	0.014	18.4	1.9	1	23	415	437	415	437	0.96
7	20	1.6e-06	0.00074	22.4	0.5	2	23	457	478	456	478	0.97
8	20	1.5e-06	0.00073	22.4	1.5	1	23	484	506	484	506	0.99
9	20	0.0025	1.2	12.3	0.4	3	23	634	654	633	654	0.96
10	20	2.8	1.3e+03	2.7	13.2	1	23	660	682	660	682	0.96
11	20	3.8e-05	0.018	18.1	1.9	1	23	687	709	687	709	0.98
12	20	9.4e-06	0.0044	20.0	2.0	1	23	715	737	715	737	0.98
13	20	0.0012	0.56	13.4	3.6	2	23	744	765	743	765	0.97
14	20	3e-05	0.014	18.4	1.9	1	23	771	793	771	793	0.96
15	20	1.6e-06	0.00077	22.4	0.6	2	23	813	834	812	834	0.97
16	20	1.2e-06	0.00055	22.8	0.4	1	23	840	862	840	862	0.99
17	20	0.00034	0.16	15.1	0.7	1	23	871	893	871	893	0.98
18	20	0.0034	1.6	11.9	3.1	1	23	899	921	899	921	0.98
19	20	0.00049	0.23	14.6	0.7	1	23	927	949	927	949	0.98
20	20	0.52	2.5e+02	5.0	0.1	1	14	955	968	955	976	0.77

Sequence Information

Coding Sequence: ATGGGATTGTGTGATGCGATTGGTGCATCTTCTACTCCAACTGAGCTTGGATTTGACGTAGTCTGGGAGCAGCCTGAGCTTGGATCGCATGATATAGCAATGGATGCCCTATGTCGCTGTTGCCTAACAGAACACCCAATTATACACAACATTTTCGAAGATGGAATACTGAAAAAACTTCGATTATGTTCAAATGTTACAATTTCAAAAGGTGATAGCCTACCGAAAATAATTTGCGAAAATTGCTTAGAAAAAATCGAAACTTGTTATGAATTTCGTCAAACTTGTGAAAGATCAGAATCCATTTTAAGAGATTGGATAGAAAAGAATGACTTAAGAAAAGAAGGtgaatcggaaattgaaaaaccCAGTGATGACGAATGTGAGGGCAGCGaAACAGGAATATTAAAATCAACAGTTATTAGTGGTTTTTCTATGCAAAAAGAGGAGCATATCATAGATTTGTCTGAAACGGACTTAATAGAATGCTTAAGTACGGCAAACGATGAGATGATCGATCTAAATGAGCAGACAGCTAGTGGTGGAAATGCGACTGAGACTTCCATGTATAGTGATGAAGTAGAAAATAGTTCAACGATTGATGATGGTGgctttaaaattataaatgatatcgaagaagaagaagcacaagaggaaatagaaataaaacactCCACCATCCTTGAAAATTATACCTGTGAAAATGACTATAATTTACTTCAGGAAGAAGATGAACATGctaattttgatgaaattaatCAGAAAGTTAAGAAAGACAATGAAACGAAAATAAAAACTCGAAAATCTAAACGAATAGAAAAATCAGTGGCTTGCAGAATTTGTAATCAAACATTCTCTTCCGAAGAAGCTGTAAAGGAACACGGAAATTCTCATATAGTAAATGGACAATTCTGTTGTCACCATTGTAGTAAAACATTTAAATGCATGAAATACTTACAAAGACATTTAGTTCGACACGGATTAAAAAAATACGAATGCACTTTTTgtaaatcaagattttatgattcaTCTAACCTCAGCAAACATATACAAATTCATACTGGAGAAAAGCCTTATGAATGTGGAACATGCAAAAAACGATTCGCACAAAATTCTAAACTAAAGCTTCATAAAAGAGTGCATAGTGATGAAAAACTAGTGGAATGTGATGtatgttttaaaagattttcgcaCAATGGTCTTTTGCATTCGCATAAAAAAGTACATTTATCGGTAAGAGAACATATCTGCACCATTTGTCAGAAAGGATTTACATTATCTAATCAATTAAAAAGACATATGGAACTACATCAGAATCCAGAAATGAAATTACACATGGAACTACATCAGAATCCAGAAATGAAATTACAATGCAATGAATGCGGAAGAAGATATTCAAGTAGTACTGGTTTAGCTTATCACATGCGAACACATACTGGTGAGCGTCCATATAAATGTACGATATGTTCCAAGGCTTTTAGAGCGAAATATAATCTTTCTAATCACTTAATGACTCATTCTAAAGAGAAACCAACCAACTTAATAGAATGCTTAAGTACGGCAAACGATGAGATGATCGATCTAAATGAGCAGACAGCTAGTGGTGGAAATGCGAATGAGACTTCCATGTATAGTGATGAAGTCGAAAATAGTACAACTATTGATGATGGTGcctttaaaattataaatgatatcgaagaagaagaagaagaagcacaagatgaaatagaaataaaacaTTCCACCATCCTTGAAAATTATACCTATGAAAATGACTCTAATTTACTTCAGGAAGAAGATGAACATGctaattttgatgaaattaatctgaaagttaagaaaaacaatgAAACGAAAATAAAAACTCGAAAATCTAAACGAATAGAAAAATCAGTGGCTTGCAGATTTTGTAATCAAACATTCTCTTCCGAAGAAGCTCTAAAGGAACACGGAAATTCTCATATAGTAAATGGACAATTCTGTTGTCACCATTGTAGTAAAACATTTAAATGCATGAAATACTTACAAAGACATTTAGTTCGACACGGATTAAAAAAATACGAATGCACTTTTTGTAAATCAAGATTCTATGATTCATCTAACCTCAGCAAACATATTCAAATTCATACTGGAGAAAAGCCTTATGAATGTGGAACATGCAAAAAACGATTCGCACAAAATTCTAAACTAAAGCTTCATAAAAGAGTGCATAGTGATGAAAAACCAGTGGAATGTGATGtatgttttaaaagattttcgcaCAATGGTCTTTTGCATTCGCATAAAAAAGTACATGTATCGGTAAGAGAACATATCTGCACCATTTGCCAGAAAGGATTTACATTATCTAATCAATTAAAAAGACACATGGAATTACATCAGAATCCAGAAATGAAATTACACATGGGACTACATCAGAATCCAGAAATGAAATTACAATGCAATGAATGCGGAAGAAGATATACAAGTAGTACTGGTTTAGCTTATCACATGCGAACACATACTGGTGAGCGTCCATATAAATGTACGATATGTCCTAAGGCTTTTATAGCGAAATATAATCTTTCTAATCACTTAATGACTCATTCTAAAGAGAAACCACCTCATAAATTTGAATGTCCTTGCTGTGGGAAAGGCTTTTTCCGTAAAGGTGCGTTGGATGTTCATTTACAAACACATACAGGAGACTGGCCTTTTgaatgtaaaatatgtaaaaaaggaTTTTTACGTAAAGTTCATAGGGATGTACATATGCGCACCCATACGGGACAGAGCCCCTATCCTTGTTCAGTTTGTGGGAAACCTTATGGGAGCTTTTCAGCTCGTAAAAAACATATGTTTAAACATACGGGAGAAGAAAACTATTTCTGTAATATTTGTGAGAAAGGTTTTGGACAAGCTTGGATTAGGAATGCGCACCAAAAAAGACAGGCATGCAAAGCGAAAACTGATACAAACGATCAGAATAAAACGTTGAGttaa
Protein Sequence: MGLCDAIGASSTPTELGFDVVWEQPELGSHDIAMDALCRCCLTEHPIIHNIFEDGILKKLRLCSNVTISKGDSLPKIICENCLEKIETCYEFRQTCERSESILRDWIEKNDLRKEGESEIEKPSDDECEGSETGILKSTVISGFSMQKEEHIIDLSETDLIECLSTANDEMIDLNEQTASGGNATETSMYSDEVENSSTIDDGGFKIINDIEEEEAQEEIEIKHSTILENYTCENDYNLLQEEDEHANFDEINQKVKKDNETKIKTRKSKRIEKSVACRICNQTFSSEEAVKEHGNSHIVNGQFCCHHCSKTFKCMKYLQRHLVRHGLKKYECTFCKSRFYDSSNLSKHIQIHTGEKPYECGTCKKRFAQNSKLKLHKRVHSDEKLVECDVCFKRFSHNGLLHSHKKVHLSVREHICTICQKGFTLSNQLKRHMELHQNPEMKLHMELHQNPEMKLQCNECGRRYSSSTGLAYHMRTHTGERPYKCTICSKAFRAKYNLSNHLMTHSKEKPTNLIECLSTANDEMIDLNEQTASGGNANETSMYSDEVENSTTIDDGAFKIINDIEEEEEEAQDEIEIKHSTILENYTYENDSNLLQEEDEHANFDEINLKVKKNNETKIKTRKSKRIEKSVACRFCNQTFSSEEALKEHGNSHIVNGQFCCHHCSKTFKCMKYLQRHLVRHGLKKYECTFCKSRFYDSSNLSKHIQIHTGEKPYECGTCKKRFAQNSKLKLHKRVHSDEKPVECDVCFKRFSHNGLLHSHKKVHVSVREHICTICQKGFTLSNQLKRHMELHQNPEMKLHMGLHQNPEMKLQCNECGRRYTSSTGLAYHMRTHTGERPYKCTICPKAFIAKYNLSNHLMTHSKEKPPHKFECPCCGKGFFRKGALDVHLQTHTGDWPFECKICKKGFLRKVHRDVHMRTHTGQSPYPCSVCGKPYGSFSARKKHMFKHTGEENYFCNICEKGFGQAWIRNAHQKRQACKAKTDTNDQNKTLS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -