Basic Information

Insect: Dioctria linearis
Gene Symbol: -
Assembly: GCA_963930735.1
Location: OZ005744.1:202102735-202110097[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 4.8e-05 0.023 17.7 2.7 1 23 449 471 449 471 0.97

2 18 1.6e-05 0.0077 19.2 0.4 1 23 477 499 477 499 0.97

3 18 6.5e-05 0.031 17.3 1.7 1 23 505 527 505 527 0.98

4 18 1.9e-05 0.0091 19.0 3.1 1 23 533 555 533 555 0.97

5 18 0.00014 0.065 16.3 5.8 1 23 561 583 561 583 0.98

6 18 8e-05 0.038 17.0 5.7 1 23 589 611 589 611 0.97

7 18 3.8e-07 0.00018 24.4 4.3 1 23 617 639 617 639 0.98

8 18 1.4e-07 6.6e-05 25.7 2.4 1 23 645 667 645 667 0.97

9 18 0.00019 0.089 15.9 5.7 1 23 673 695 673 695 0.97

10 18 7.5e-05 0.035 17.1 6.4 1 23 701 723 701 723 0.98

11 18 2e-05 0.0095 18.9 4.7 1 23 729 751 729 751 0.98

12 18 4.8e-05 0.022 17.8 8.3 1 23 757 779 757 779 0.98

13 18 7.1e-06 0.0034 20.3 7.8 1 23 785 807 785 807 0.97

14 18 8.4e-07 0.0004 23.3 7.7 1 23 813 835 813 835 0.98

15 18 0.00026 0.12 15.4 9.5 1 23 841 864 841 864 0.95

16 18 0.00022 0.1 15.7 0.5 1 23 870 892 870 892 0.97

17 18 0.00096 0.45 13.7 4.3 1 23 902 924 902 924 0.99

18 18 1.4e-05 0.0064 19.5 2.9 3 23 932 953 930 953 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	4.8e-05	0.023	17.7	2.7	1	23	449	471	449	471	0.97
2	18	1.6e-05	0.0077	19.2	0.4	1	23	477	499	477	499	0.97
3	18	6.5e-05	0.031	17.3	1.7	1	23	505	527	505	527	0.98
4	18	1.9e-05	0.0091	19.0	3.1	1	23	533	555	533	555	0.97
5	18	0.00014	0.065	16.3	5.8	1	23	561	583	561	583	0.98
6	18	8e-05	0.038	17.0	5.7	1	23	589	611	589	611	0.97
7	18	3.8e-07	0.00018	24.4	4.3	1	23	617	639	617	639	0.98
8	18	1.4e-07	6.6e-05	25.7	2.4	1	23	645	667	645	667	0.97
9	18	0.00019	0.089	15.9	5.7	1	23	673	695	673	695	0.97
10	18	7.5e-05	0.035	17.1	6.4	1	23	701	723	701	723	0.98
11	18	2e-05	0.0095	18.9	4.7	1	23	729	751	729	751	0.98
12	18	4.8e-05	0.022	17.8	8.3	1	23	757	779	757	779	0.98
13	18	7.1e-06	0.0034	20.3	7.8	1	23	785	807	785	807	0.97
14	18	8.4e-07	0.0004	23.3	7.7	1	23	813	835	813	835	0.98
15	18	0.00026	0.12	15.4	9.5	1	23	841	864	841	864	0.95
16	18	0.00022	0.1	15.7	0.5	1	23	870	892	870	892	0.97
17	18	0.00096	0.45	13.7	4.3	1	23	902	924	902	924	0.99
18	18	1.4e-05	0.0064	19.5	2.9	3	23	932	953	930	953	0.95

Sequence Information

Coding Sequence: ATGGTAATAGAGCATTGGTCGGAACTGGGTGTAACCTTAACTATCTTTAATGAGTCATTAATAACTGGAGAATTTCCGGACGCTTGGAAGGAATCAGTAGTAACTCCAATTCATAAGGTAAAAAATACGAAGAAATGTGAAGAATTGAGACCAATTAATATGCTACCACTATGTGAGAAGATTTTGGAAAAAGGAGTACAAATCCAACTAGAAAAATACCTAGGAGAAAATGGTCTTATAGCTAAggaacaatcagggtttagaaagcaacacaattgcgagacagcattaaattgggtaGTGACGGAATGGGAAGAAGAAATGGAGGAAGGTAACACTATTCTAGCACTTGGAAAATATTGGGTTGTTACAAATCTCTTCCAAGGATCAGGGCAAGGTGCTTATACTTTAGAATCGCCGCATATTATGCCTTCAATTCCTTCCTCATTGCCACCTCCAATATCATCTACACATACTTCTACGGCTACGGGTACGGCTATTGTTAAAATAATTGACACcataaaacaagaagaaaatcATGTTCAGCAGCGTCATTCTCAACAACCACCAACACGACAACAGCAAGTTGTTACATCCGTTAACTCTAACTCAATACAGATTCCAAATCCAATGATTAATCCTACAAGTCAAGGCCAACAACAGCTCTCAAACGGAACAATTATATCAACATCTGGCCCACCTGAACAAATTCAGGTTTCTGTTAATCCTGAAAACAGTCTTATGGTTATGGATGCATCAACAAAGCAGGAAAAAATGCCTAATATGAATCCAAATATGAATTCAGAGCCAATGCAAGTTGATAGACCAATGTCGCACAATATGCAAGATACAGTTAAAGAAGAAAAGCCATTTTCCAATTGTAAACCGCCAATAATTCAACAAATACATCCTCATCATCTGCCACCCGATAGTAAGATGCATGTACCTCATTTGTTGGATGTTCGTAATCCAGATGGTTCTATTGTTAAACTTCCTGCACCTTCAGAGCAAGAGTTAGGAAAGTCTCTAGGGGTTGAAATGTACAAGGTTAATATTGAAGATTTAAGCCAGTTCTTATCATATCATGAAGTATTTGGAAAATTGCATGGAGATGTTATGAACCATCAAATCTCTCATTCTAACACACATCCCACTAATACGGTTACAAATGCTCCCGGTATTCCTACATCTACCAATGGCGTTTCCGTGGTCAGTAATATAACTTCCACATCAGGTGAACTTTTAATGCCAAAAATGGAAGTAGGACAAATACCTGGCATTAATGCAAATCACGGTGCTGGTCCTCATCCTTTAGGAGATACAGCTAATATTACTCCGGCCACACATAGCTGTGACATATGTGGAAAAATGTTTCAATTTCGTTATCAGCTTATAGTACATCGTCGCTATCACAGTGAACGAAAACCGTTTAATTGTCAAGTTTGTGGACAAGGATTTACATCTTCTCAAGATTTAACACGACATGGAAAAATTCATATTGGTGGTCCAATGTTTACTTGTACCGTGTGTTTTCACGTCTTTGCAAATGATGCAAGTTTAGAAAGGCATATGAAACGTCACTCAACTGATAAACCATTTGCTTGCACAATATGTCAAAAAACGTTTGCTCGTAAAGAACATTTAGATAACCATTTCCGTAGTCATACGGGGGAGACACCATTTCGGTGTCAGTTTTGTGCAAAAACGTTTACCCGAAAGGAGCATATGACGAATCATGTTCGCAAGCATACAGGTGAAACACCTCATCGCTGCGATATTTGTAAGAAATCCTTTACTCGTAAAGAGCATTATGTAAATCATTACAtgtggcacacaggaGAGACACCTCACCAATGTGAAGTATGTGGAAAGAAATATACACGGAAAGAGCATCTAGCGAATCATATGCGTTCACATACCAATGATACACCGTTCCGATGTGAGATTTGTGGAAAGAGTTTTAGCCGGAAGGAACATTTCACCAATCATATTCTATGGCATACTGGAGAAACTCCTCATCGTTGTGATTTTTGTGCGAAAACTTTTACTAGAAAAGAACATTTATTGAATCACGTTCGGCAACATACTGGAGAATCACCACATCGTTGTACATATTGTCTTAAAACGTTTACACGTAAAGAACATCTTGTTAATCATGTTCGACAGCATACAGGCGAAACACCATTTAAATGTACATTTTGTACGAAAGCTTTCACAAGAAAAGATCACATGGTTAATCATATAAGACAACATACCGGGGAATCTCCGCACAAATGCACATTTTGCACGAAAACATTTACAAGAAAGGAACATCTTACTAATCACGTCCGGCAACATACTGGAGAATCTCCGCATAGGTGTACCTATTGTAAGAAAACCTTTACACGAAAAGAGCATCTCACAAATCATGTTCGTTTGCATACTGGTGATTCGCCGCATAAGTGTGAATATTGTCAAAAAACATTTACCAGGAAGGAACATTTAAATAATCATATGCGACAGCATTCTAGCGATAATCCACACTGTTGTAACGTGTGCAATAAACCATTTACAAGAAAGGAGCATCTTATAAATCATATGTCCCGTTGTCATACCGGTGATCGACCTTTTGCTTGTGAAACGTGTGGAAAATCTTTTCCTTTAAAAGGAAATTTGCTTTTCCATCAAAGAAGTCACACGAAAGGACAAGATGTAGAGAGACCATTTAGGTGTGATAAATGtccaaaagattttatttgcAAAGgACATTTGGTATCCCACATGAGATCACATTCAGGCGAAAAACCACATTTATGCACATTATGCAGTAAATCTTTTGTTGAGAAAGGAAATCTTAAGCGTCATATGAAAATGAATCATCCAAACGTTATGCTACCACCGCCGGCAACAATGACTACAACTATTAAAACCGAATCAATTCCTACGAGTACCAGCTCACCACAATTCATAAATGAACGCATTCAGCTTTTAACTAAAGCAAATCTTTTGCCTATTAATAATTTAGCACCACATCAGCCACCTACCATGCACACAATTCAACAAATCACTTCATCACCAGCTAATTCGGTTGGTGGTAATGTTAACAATAATACTTCGCTTCCAGGAGGTTTAGTACCAATAATAACATCAACAATAACATCACATGCAagtcagcaacaacaacaacagcagcagcaacagcagcaacaacagcaacagcagcaacaacagcagcaacaacaacaacagcagcagcagcagcaacaacagcagcaacaacaacagcagcagcaacaacaacagcaacaacaacagcagcagcagcagcagcagcaacaacagcaacaacagcaacagcagcaacaacaacaacagcaacaacaacatgtTGTTGTTGCACCTCAAATGCATCAACCTCCACATCATCAACAATCTAACGCGAATCCGTCTGACCAACCTCCGTCATCTGTGCCGATTACAATAATTCAAACAGGTGATCCAACAGCTATAGCTCGAGCAGCTATTCAATTGCAACATGCTATTCCCACAAATGTGGAACAGCATCCCGTAgtgtattaa
Protein Sequence: MVIEHWSELGVTLTIFNESLITGEFPDAWKESVVTPIHKVKNTKKCEELRPINMLPLCEKILEKGVQIQLEKYLGENGLIAKEQSGFRKQHNCETALNWVVTEWEEEMEEGNTILALGKYWVVTNLFQGSGQGAYTLESPHIMPSIPSSLPPPISSTHTSTATGTAIVKIIDTIKQEENHVQQRHSQQPPTRQQQVVTSVNSNSIQIPNPMINPTSQGQQQLSNGTIISTSGPPEQIQVSVNPENSLMVMDASTKQEKMPNMNPNMNSEPMQVDRPMSHNMQDTVKEEKPFSNCKPPIIQQIHPHHLPPDSKMHVPHLLDVRNPDGSIVKLPAPSEQELGKSLGVEMYKVNIEDLSQFLSYHEVFGKLHGDVMNHQISHSNTHPTNTVTNAPGIPTSTNGVSVVSNITSTSGELLMPKMEVGQIPGINANHGAGPHPLGDTANITPATHSCDICGKMFQFRYQLIVHRRYHSERKPFNCQVCGQGFTSSQDLTRHGKIHIGGPMFTCTVCFHVFANDASLERHMKRHSTDKPFACTICQKTFARKEHLDNHFRSHTGETPFRCQFCAKTFTRKEHMTNHVRKHTGETPHRCDICKKSFTRKEHYVNHYMWHTGETPHQCEVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFSRKEHFTNHILWHTGETPHRCDFCAKTFTRKEHLLNHVRQHTGESPHRCTYCLKTFTRKEHLVNHVRQHTGETPFKCTFCTKAFTRKDHMVNHIRQHTGESPHKCTFCTKTFTRKEHLTNHVRQHTGESPHRCTYCKKTFTRKEHLTNHVRLHTGDSPHKCEYCQKTFTRKEHLNNHMRQHSSDNPHCCNVCNKPFTRKEHLINHMSRCHTGDRPFACETCGKSFPLKGNLLFHQRSHTKGQDVERPFRCDKCPKDFICKGHLVSHMRSHSGEKPHLCTLCSKSFVEKGNLKRHMKMNHPNVMLPPPATMTTTIKTESIPTSTSSPQFINERIQLLTKANLLPINNLAPHQPPTMHTIQQITSSPANSVGGNVNNNTSLPGGLVPIITSTITSHASQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQQHVVVAPQMHQPPHHQQSNANPSDQPPSSVPITIIQTGDPTAIARAAIQLQHAIPTNVEQHPVVY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00628542;
90% Identity: iTF_01049832;
80% Identity: -