Dlin003361.1
Basic Information
- Insect
- Dioctria linearis
- Gene Symbol
- -
- Assembly
- GCA_963930735.1
- Location
- OZ005740.1:14722668-14722997[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.5e-06 0.00048 22.4 0.0 13 37 19 43 16 49 0.87 2 2 2.4 7.7e+02 2.5 0.0 23 39 89 105 79 108 0.79
Sequence Information
- Coding Sequence
- ATGGCGTCAAAACAAGAGGAAaggagaaaattaattatttccaccAAGCACGTGGAAAATCCGGAGATGTCACAAAGAAAGTTGGCTAAAATCCTCGATATTCCGAAGACAACTATTCAAAATGTTTTGTCTAAATTTTCGGGATCTTCTAGTGTCCAGAGAAAGCCTGATTCAGGAAGAAAACGTGGAGCAGAAAACAAGGACATTCAGGACAAAGTCACCGCTACTTTAAAAAGGAATCCTAACCTTACTGTCAGGGATATGGCTGATAAAATAGGAGCATCGAAGTCAACTGTGCAAAGGATGAAGAGGAGGATGGAAAACTTCTAA
- Protein Sequence
- MASKQEERRKLIISTKHVENPEMSQRKLAKILDIPKTTIQNVLSKFSGSSSVQRKPDSGRKRGAENKDIQDKVTATLKRNPNLTVRDMADKIGASKSTVQRMKRRMENF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -