Dlin033644.1
Basic Information
- Insect
- Dioctria linearis
- Gene Symbol
- -
- Assembly
- GCA_963930735.1
- Location
- OZ005741.1:39790985-39808049[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-07 0.00022 23.5 0.0 1 39 16 54 16 61 0.89 2 2 6.9e-08 2.2e-05 26.7 0.0 4 35 92 124 90 130 0.90
Sequence Information
- Coding Sequence
- ATGGTGCGAATATATAAGAAGAAGGAGTCAAGGAACGGTGAAGTGGATGAAGAGGCAATGTCCGCAGCTACAAAAGAAGTACTTGAGGGGAAGAAATCTTACAGAAAACCTGTAAATAAGTACGGCATTAAACCATCAACCTTGCAACGTCGCATTAAAAAAATTCGAGATGAAACTTCTCGTGTAAACAAAACTCATCGTACATTCAGCTGTAAATATACGTCTATTCAGGTATTTTTAGCTGAGGAGAGTCTTTTGAATAAATATGAATCTGCGCTAGCACAAGCTCTAAAATTAATTAGAGAGGGAAAAATTGGGATCCCGCAGGCAAGTACGGAGTATTATGTTCCAGAAACTACTTTACTGGACAGAATTACTGACAGGATTGCTGATGGAGTTGGAAAAATCGGTCCAAAAACTGTTCTTTCTCAAGAAGAGGAAGATAAATTAGTAGATTGGCTAGCAAAAATggctaaatgcggatttcctctAAAACTAGAGGAACTACTAaatgttgttgaaaaaattattagataa
- Protein Sequence
- MVRIYKKKESRNGEVDEEAMSAATKEVLEGKKSYRKPVNKYGIKPSTLQRRIKKIRDETSRVNKTHRTFSCKYTSIQVFLAEESLLNKYESALAQALKLIREGKIGIPQASTEYYVPETTLLDRITDRIADGVGKIGPKTVLSQEEEDKLVDWLAKMAKCGFPLKLEELLNVVEKIIR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -