Basic Information

Gene Symbol
Zmiz1
Assembly
GCA_001313825.1
Location
NW:4699628-4847272[+]

Transcription Factor Domain

TF Family
zf-MIZ
Domain
zf-MIZ domain
PFAM
PF02891
TF Group
Zinc-Coordinating Group
Description
This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 0.0037 19 4.3 0.8 4 24 480 500 477 506 0.92
2 2 4.4e-26 2.2e-22 77.8 4.3 1 50 560 609 560 609 0.98

Sequence Information

Coding Sequence
ATGGTGGCAGCTGCCACTGCTGCGGTCACCGCCACTGCCAGCGTGGTGGCCATGCAGGACCGTCAGGACATCTCCGCACAGTACAATCAGATGCAGAGCCAACATGGAATACCCCATCAAACCGTACCGCCGTACAACGCGGGGTACGGTCAGCGAGGACCAATGGCGGGAATGGGGCCAGTCGGGATGAACAATTTCAGTAACATAGGCACCGTCAGCCCGATGCACACTATGAATTCCATGAATTCGATGAACAGTATGAATGGCATGAACACGATGAATCCCATGACGATGGGAGGTATGAGCAGTATGAGCGGTATGAACGCGATGAACCCCATGGGCTCCATGAGCGGCATGGGCAACATGGCGATGAGCAACATGATGGGACCCAACAATATACAGATGAACAAGATGGCCGCAATGCAGCAGGCTCAACCGCACCAAGGCTACTCTCGGCGGCTGGCGCCTTACCCCGCCCCCACGGTGCACATCGCGCAGAAGCGGCAGCAGGTGCCGTCGTACCCGGGCCACAGTCCGGCGGCGATGCAGCCGGGCGGCTTCAACGGCATGACGGCGTCGCAGTACCCGAGCAGCTATCCCAgcggcgcgcggccgagctTCCAGCCGCAGTACCAGCAGCCCACGCAGAGCATGATACCGAACGCGGCCGCCACCGCGGCGGGCGTCTTCGGGCCCAACACCGCGATGATACGGGGCTCGAATATGAGGCAGGCGGCGCCATCTTACAACGCGGCGTCGCAGGCGGTCGCCGCGAACCAATATTACAGCAACGCCGGAGTGCCGGTCAGCATGGGGCCGACCGGCACGGGGGCGGTCACCGGTCAGTTCGTAGGTCACCAACAGCCGAACGCGGGCTAcgggggcggcggcggtggcggtggcgcCGCTACCGGTAGCTACGGCGCCGCGTCCGCCGGCGCCGTGGTGGCGACCAGCCAATATCAGCAGGACGTCGCGGCGTCGATGAAGTCGACGAGCGGCGGCAACGTCAGCTATCAGCACAGCCCGATACCCGGCAACCCGACGCCGCCGTTGACGCCCGCCACCAGCATGCCGCCTTACATCAGCCCGAATCCCGACCTCAAGCCGAGCTTCAACGACTTGAAGTCGCCGGTTAACATACAGAATGAAGAATTGAGACTGACATTCCCCGTGAGAGACGGCATCATTCTCCCGCCCTTCCGCCTCGAGCACAATCTGGCCGTTAGTAATCACGCGTTCCAACTGAAGCCCACGGTGCATCAGACGCTGATGTGGCGATCCGATTTGGAGCTGCAGCTCAAGTGTTTCCACCACGAGGACAGGCAGATGAATACGAACTGGCCGGCGAGCGTGCAGGTTTCCGTCAACGCGAATCCTCTCGTGATCGATCGCGGCGAGAACAAAACTACCCACAAGCCTCTTTACTTAAAGGATGTCTGCCAAATCGGGAGGAACACAATACAGATCACCGTGTCCGCGTGCTGCTGTTCGCACCTGTTTGTCCTCCAACTGGTCCACCGGCCCAGCGTGCGAAGTGTACTCCAGGGATTACTGCGTAAAAGGCTTCTGGCGGCGGATAATTGCATAAGTAAAatcaaaaaaaatttcaacagtACAATCTCGACCAATGGCATACAGTCGGAGAAGGACGTGGTGGAGCAAACAGCACTGAAGGTATCCTTAAAGTGTCCTATTACATTCAAACGCATTACACTGCCAGCTAGAGGGCACGACTGCAAGCATGTGCAGTGCTTCGATCTGGAGTCGTATCTGCAGTTGAATTGCGAACGAGGCTCTTGGAGGTGTCCGGTGTGCTCGAAACCCGCGCAATTGGAAGGCTTGGAGGTCGACCAGTACATATGGGGGATTTTAAATACGGTGAACACCGCGGAGGTCGACGAGGTGACGATAGACTCGCTCGCCAACTGGAAAGCCACGAAGAGCAGCTTAGCCGGCATCAAGTccgaggaggagaacgagTACAAGAGAACAACGGCCAAGGCGATGTCGCCGGGCAGCATGAACATGCCGACCATGAACAACTGGGAGATGAATCAGGCGATGAGCCCCTACTTACCGCCCGACATGAGCAGCATCGTGAGCGGCTCCATGATGAACAACATTAACCACCGGAACACCTCGGGCGGAACGTACGAGATCAACTCGGCGACGAACACCTCCGGCAGTAACGATTACGCAAGCGGCGCCGGCCCGCTCTCGCACCTGAATGAGTCCGTTAATACGCTCGACACTCTCAATGCTATAGAGAAGTCGATTAACGAACAGATGCCTCATACCCCGCACACGCCGCACACCCCGCAATCGACGCCTCACACTCCGGGTGGCGGCAACAGCGGCCCACCGAGCGTTCCACCTGCGTCGCAGGAGTCGACGGGGAACCACAACACCTCCGGCAGCACGAGTACGACCATAAATAACGACAACAACGCCACCGCGGATATACCGTCGGATCTGAATTTCGACCCCGCCGCGGTCATAGACGGGGAAGGCACTGGTCAGGAGGCGTTAAATCTCTTGTCGGACAACGTTGTGGACGCGATGGACTTCCTGTCGTACCTCGATCCACCGGACCTAAACACTCCACCCAGCAGTGGCGCTAGCAGCGGCAACCCTTCCTCCAGCGACGACATATTGGCGCTTTTCGATTAA
Protein Sequence
MVAAATAAVTATASVVAMQDRQDISAQYNQMQSQHGIPHQTVPPYNAGYGQRGPMAGMGPVGMNNFSNIGTVSPMHTMNSMNSMNSMNGMNTMNPMTMGGMSSMSGMNAMNPMGSMSGMGNMAMSNMMGPNNIQMNKMAAMQQAQPHQGYSRRLAPYPAPTVHIAQKRQQVPSYPGHSPAAMQPGGFNGMTASQYPSSYPSGARPSFQPQYQQPTQSMIPNAAATAAGVFGPNTAMIRGSNMRQAAPSYNAASQAVAANQYYSNAGVPVSMGPTGTGAVTGQFVGHQQPNAGYGGGGGGGGAATGSYGAASAGAVVATSQYQQDVAASMKSTSGGNVSYQHSPIPGNPTPPLTPATSMPPYISPNPDLKPSFNDLKSPVNIQNEELRLTFPVRDGIILPPFRLEHNLAVSNHAFQLKPTVHQTLMWRSDLELQLKCFHHEDRQMNTNWPASVQVSVNANPLVIDRGENKTTHKPLYLKDVCQIGRNTIQITVSACCCSHLFVLQLVHRPSVRSVLQGLLRKRLLAADNCISKIKKNFNSTISTNGIQSEKDVVEQTALKVSLKCPITFKRITLPARGHDCKHVQCFDLESYLQLNCERGSWRCPVCSKPAQLEGLEVDQYIWGILNTVNTAEVDEVTIDSLANWKATKSSLAGIKSEEENEYKRTTAKAMSPGSMNMPTMNNWEMNQAMSPYLPPDMSSIVSGSMMNNINHRNTSGGTYEINSATNTSGSNDYASGAGPLSHLNESVNTLDTLNAIEKSINEQMPHTPHTPHTPQSTPHTPGGGNSGPPSVPPASQESTGNHNTSGSTSTTINNDNNATADIPSDLNFDPAAVIDGEGTGQEALNLLSDNVVDAMDFLSYLDPPDLNTPPSSGASSGNPSSSDDILALFD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00770049;
90% Identity
iTF_01087573;
80% Identity
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