Dqua001363.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- Znf711
- Assembly
- GCA_001313825.1
- Location
- NW:130081-144379[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 3.1 1.9e+02 2.1 1.0 3 23 199 219 198 220 0.78 2 17 4.2 2.5e+02 1.7 3.7 1 23 226 248 226 248 0.97 3 17 0.027 1.6 8.6 0.5 2 23 254 275 253 275 0.97 4 17 0.011 0.65 9.8 6.9 2 23 556 578 555 578 0.95 5 17 1.8 1e+02 2.9 1.0 1 23 642 664 642 664 0.82 6 17 0.69 41 4.2 1.1 2 23 845 866 844 866 0.96 7 17 1.9 1.1e+02 2.8 0.2 3 23 883 903 881 903 0.95 8 17 0.0083 0.49 10.2 1.8 1 23 911 933 911 933 0.98 9 17 0.028 1.7 8.5 0.5 2 23 1031 1052 1030 1052 0.95 10 17 0.13 7.8 6.4 0.4 2 23 1061 1082 1060 1082 0.95 11 17 0.00075 0.044 13.5 0.5 1 23 1159 1181 1159 1181 0.98 12 17 0.028 1.6 8.6 0.3 1 23 1254 1276 1254 1276 0.97 13 17 2.1e-05 0.0012 18.4 0.6 1 23 1282 1304 1282 1304 0.97 14 17 0.0041 0.24 11.2 2.6 1 23 1364 1386 1364 1386 0.97 15 17 0.00069 0.04 13.6 1.8 1 23 1392 1414 1392 1414 0.99 16 17 0.048 2.8 7.8 0.9 2 23 1511 1532 1510 1532 0.97 17 17 6.4 3.8e+02 1.1 0.2 3 23 1541 1561 1540 1561 0.73
Sequence Information
- Coding Sequence
- ATGTTGCCCGCGGCGGGCAAGGGCGGGCGGAGAAATCTGCGTGGAAGCGCGCGGCTGTCGTCCAAGATGTCGGGAAGGCCGCCCCGGCTGCGTATACTGCGACCGCGgccgcagcagcaacagcggCCGAGGAGCAACTCCGTCGACTCGAGCGGGGCCGCCGAGCCGTCCCCGGAAGGTAACCTTAAAGAGCCGGAGAGGCTCGCGGACGTCGCGAAAAAACGCGACGCGGTGCGGCCGGCCGATGCAAAGGCAGCAGCCAGCAGCAATACAAAGACGACGAGCGCGATGGCGAACGAGAtgcgcgacgatgacgaggaggaggacgacgacgacgacgatgatgatgaggacgaggaggaagaggaggagctGATGGCCGCCGGCGAGGACGAACAACAACCGATGGACGTCGACTTGGTCGCGGGGGGACCCGAGCAGGTGATCGATCTCGAGCCGAACGAACGGAATTCGTACGAATGCAAGAGCTGTAAGCCCGTGAGGACGCTGCCAAGTATCAAGGCCTACTTCGAGCATCTGCGGAAGGAGCATAAACGCAAGGGTAAAAGCGGGCACAGCACAGTAGAAAATCGGTGCACTGCGTGTTCGTATGTTGCGTTGAGCTTGAAAGATCTCGAAACTCACCAAAGAGTGCATCATTTGAAAAGAAGATTCTTTCGATGTGCGAAATGCTCCTACGTGACTCACGTCAGAGCGCGTTATACTAAGCATGTTAAATATCATTCTATGCCAATGATCAAGTGCGATGCTTGCGATTTTCGTACACCGTATAAGTGGAATCTAGATAGGCATACCAGGAATCATGGTGGCGCGGGTGCTTTCCAATGTCGTGCATGTAACTTTACTGCTGATATTCGACAGAGCTTGACGGTGCACGAGACGAACCATCATGACCCGCCTGTGGGTCAGGTCAACCGCAAGAATAGCAATCCCTTCGAACGTAAGCCACGAAACGGTGCGAAACGCTATAATCAGGTCGGAGCAAGTGACTTTCGAGAAGCGTTGAATAAATCTGGGAGTTCAGTGGTGTCAAGCCTCTCCGACACGTTCATGTCGGATCCATCGGTAATTTTAGTGGACGATAAGAGGAACGCCATAGCCGGCGCCGAGTGTATCGCGTTGAAGTGCGAGGAGAAGGGTTGTCAGTTCATAACAGCCTGGGATTCCGAGATGCAGCGTCATTTAGCCGAGTGCCACGCGCCAGTCATTCCATCCAAGCCGAGGAAACCACTGCCAATGTTAATTCCACTGAATACACCTAATCCCAAACCGACCACCGTACCTAACAGCGGGCCACCTACGACTTTACTGAAGGTACCGCGAGTCAGAGTCAGGCCCGAATTGGCGCAGATCGCGAGAGATACTGAGCTAGCCAAGATGTATGGAAATAAGGAGGCGACGAATTCCAAGAAGGGTCTCAATACCGCCGCCGGTATATTTGAGCGAAAGAACGCCTCCTTCTTCGATAAGCTTAAGGAAAAGTTAACGACCGCGACGTCGATTAATAACGGCGTGCCGGAGGTAGCCGTAAGTAGTGTGAACGACTTGAAATGCTGGTGTACGTTTAAAGCTAGTAGCATGGAAGAGCTGGCTTGCCACAAACAAACACACCACACTGCTCTCAGCGTATCCGTGGGTACGACACGTTGTCCCAAGTGTAGAAGACGTTGCAAGAGCTCGACAGACCTTCAACTGCATATGCAATACTGCCATACGCGCAACGACTCGACCACCGATAGTAGTTTAGAGAAAATAACGAACCGTTCGGACGTCCGCATGACCTCGTACCGTGGCGAATATGCTTTCCCATCGCAGCTGGATTGGGACGCGAATCTCAGAGGACTAAATTCGTCTGGATCCTCGGTTGAAGGTGGTTCGACACAAACGAGCGGCCGGCGGGTGTTCAAATGTCCCCATTGTCCGTTTTGGGCTTCTACCGCAAGTCGCTTTCACGTTCATATAGTCGGTCATTTAAACCGGAAGCCGTTCGAGTGTTCTATGTGCGCGTATCGGTCTAACTGGCGATGGGACATCACAAAACATATTAAGCTTAAAGCAGCTAAAGACGCAGTGCATATCACCGCCAGAGTACTCATGACGGATGAGGCTGGTCGACGGAATTATTCCAAGTATAACAAATATCTCGCACAGGTGGAACAGCAAACGTGGGACGAGGATCGCATGGAGGAGCGTAGCGTAGAGGAAACGAGCTCGAACGAGCCGTCGACTAAGTTGCTAATCATAAACAATAAGGAGTACATTCCTAATGCCAATCGGATGTCGAGTCCAGTTGCGATCTTGTCACCGACCGACGGCGGTCGGAACGGTCATAACGTCGACCTGAACCTGCGACCACCGCCGCCTTTGAAGGCGGCGATCAGAGGCCGCGGGCAGTCCTTGCTCAAGAACAGTCCTATCACGATGAACGTGCAGAGTGTCGGTGGTACTAGCGGTGGCGCGGTCACCATATCCTCGGCTATAACCGCGGACGAGAGCAGACGTACTCAATGGAAGTGCAAACGGTGTAACTATCGGGATTCTAACAAGGACAACGTTTTGTTACACGTTAAGTCGCATTACGAATCCGTCGATCAAGAGTCTACCGAAGAAAGGAATCCATTCGGCTGCGGAGATTGTCCGTTTTCGGCACCCGACGCTGCTACTTTGTCCCTGCACAGGACGCACCATCGGCCGAGCTATGAAACTATATTCAAGTGCTACCATTGTCCATACTACGTTAGTACAAAGGCAGAACTGTTGGAACACTCTAGGCTTCACGGGGAGGAACTGGCGGTCGTGCACCAGCAAAGCATGGACCTCCAGCTGTCCAACTCCAAGAGCAAGCTGCAGCAGGTGTTGATCTCCGACAGCGGCGCTTTGCGGCCGAAGAGCGAGGCTTCAACGATGGAACAAGTGATTCAGATAACAACGCGCAACAACGCCACGTCGAGCAGCAGCGCGTCGAAGAGCACGGGGGCTCCGCCGCCGCTTCTCTTGGACACACGTGCTCTTCCGGAAGCACCGTTGGTCTGGGTGACGCGCCCGGACAGCACGTTGACGAAGATGCTCAAGTGCCGTCACTGTCCCTACGTATCGTCACGACGCGCCGACGTGCAGGATCACGAGGCGATGCACTCGTCCAGCGAGGAGCCCGTGATCCCTTGCGCAGACTGCAGCTTTACGTGCTCGCGCCGGGACGTGATGATCGCGCACACCGAGATGCACGCCGGATGCCTGGGCACTGTTCACTGCCTGGTGGACGAGTCTCGTCCCGACTCCCAACAGCTCAGCGACCTCGCCACTCTGCTCGGCTTGAGCCACACTCCGATGCTGGGCGCCGAGCCGGATCTGCGGGACACCCGGCTGGTACATTGCTGCGACAAGTGCCCGGCGCGGTTCCTGTGCGAGAAGGAACTGCGCATTCATCTGCGATACCACACCACCGACTTGGCGTACTCCTGCCAGTGGTGCTCGTACGCGGCACGCCAGCCGTCGCACCTCTCCGCTCACCAGAAGGCCCACTCCTCGGACTACCAGGAGCGCACCAAGGTCCTGCTGTCTCTGTACGGCCACTCCCAACGATTCCCGCCGCCGGCGACGGCGTGCGTCGAGGCGGAGGTTCAGGATGGCGACGACGTCGGGCCGAACGTCGCGTGGATCGTCGTCGAGATCAATAGCTCGTACAACAGCGGCGACAACGGCGCTTCGTCGGCCGCCCAGAGGACCGGCAACCAGGTGTTCACGTGCGCCAAGTGTCCGGCGCGGTATTTCAAGCTGGACGCTCTGGAGTACCACATGACGCTGCACGGCTCGAACAATCGGTTCAAGTGCAACGACTGCGACTACTCGTCGAAGACTGCGCAGAACCTGGTGAAGCATCAGGTGGTCCATCGCCGGCACAACGAGAGCAACAGCGAGGCGTCGTCGCCACCGGCTAACATCGTCCAGGCCACGTCGCCGTCGCACACCGCCTCGTCGCCGGATCCGCAGTTCGGCCTCTTTATGCGCGGCAATCCCAACTTCGTTTACCCGGGCTACCTGCGGAACGGCCGTCTCAAGGAGAAGCGCTACAAGTGCCACAAGTGTCCGTCCGCGTTCGAGAAGCGCGAGCAGTACAGAGTGCACTTGACGTTGCACGGTGCTAAGCAGCGCTATCGCTGCGAGACTTGCGACTACTCGGTCAAGTATTACGCAAACTACGCCCAACACCAGAAGAAGCATCTGGCGAACGCGGAGGCGCAGGCGTCACGTCGGCAGCACGAGGACGACCGGATCTCCGTGGAGAGCGACAGCGACGCCATCGGACCGGCTTCACGCCCCGGCAAGTCTCTGAGATCACCCGCCGCCGGTCCTGTTTACCTGTTCACCGGCAACAACAACGGCGCATTCAACGCCGCCTACAACAACAACATTACGCTGCAGCCCTCCAATCAGGACAAGCAGAGCTTGTTGCTGATGCAGCGAAAGGGCATCATCTCGTCAACCGGCGAGGTCGAACACGAGACTATCCGTTGCCAGAGCTGTCCGTTCTCCACCACCGACAAGGACACCATGGACGCGCATAAACGCCGACATGGCATCGAGCGTATGACGCCGCCCTGCCCGCACTGCGACTACGTGCCGCGTAAAGACGAGAACGTCGGTGACCACGTCAGGCTGCACTTCACCAGACTGTACAAACCTGAGTCTTATCTCATCGTCGAGCTGTTGACCCTGATGATGGAGAAGGCGCCCGTGAACGACAAGGAGGAGAAGCAGCAGCACCCGAAGGAGCTGCTCTTCAAGGAATGCGTCGACGGTAGGTTCCTGCCCCTCGCGGAATCCACGCACTCCCATTCGTTGAACACTTCTTCTTCCTCAACCGTGAACGTGCTCAAGGAGAAAGTCATCGTGGACCCGAACACGGGCGAGACCAAGCATCTTTCCGTATGA
- Protein Sequence
- MLPAAGKGGRRNLRGSARLSSKMSGRPPRLRILRPRPQQQQRPRSNSVDSSGAAEPSPEGNLKEPERLADVAKKRDAVRPADAKAAASSNTKTTSAMANEMRDDDEEEDDDDDDDDEDEEEEEELMAAGEDEQQPMDVDLVAGGPEQVIDLEPNERNSYECKSCKPVRTLPSIKAYFEHLRKEHKRKGKSGHSTVENRCTACSYVALSLKDLETHQRVHHLKRRFFRCAKCSYVTHVRARYTKHVKYHSMPMIKCDACDFRTPYKWNLDRHTRNHGGAGAFQCRACNFTADIRQSLTVHETNHHDPPVGQVNRKNSNPFERKPRNGAKRYNQVGASDFREALNKSGSSVVSSLSDTFMSDPSVILVDDKRNAIAGAECIALKCEEKGCQFITAWDSEMQRHLAECHAPVIPSKPRKPLPMLIPLNTPNPKPTTVPNSGPPTTLLKVPRVRVRPELAQIARDTELAKMYGNKEATNSKKGLNTAAGIFERKNASFFDKLKEKLTTATSINNGVPEVAVSSVNDLKCWCTFKASSMEELACHKQTHHTALSVSVGTTRCPKCRRRCKSSTDLQLHMQYCHTRNDSTTDSSLEKITNRSDVRMTSYRGEYAFPSQLDWDANLRGLNSSGSSVEGGSTQTSGRRVFKCPHCPFWASTASRFHVHIVGHLNRKPFECSMCAYRSNWRWDITKHIKLKAAKDAVHITARVLMTDEAGRRNYSKYNKYLAQVEQQTWDEDRMEERSVEETSSNEPSTKLLIINNKEYIPNANRMSSPVAILSPTDGGRNGHNVDLNLRPPPPLKAAIRGRGQSLLKNSPITMNVQSVGGTSGGAVTISSAITADESRRTQWKCKRCNYRDSNKDNVLLHVKSHYESVDQESTEERNPFGCGDCPFSAPDAATLSLHRTHHRPSYETIFKCYHCPYYVSTKAELLEHSRLHGEELAVVHQQSMDLQLSNSKSKLQQVLISDSGALRPKSEASTMEQVIQITTRNNATSSSSASKSTGAPPPLLLDTRALPEAPLVWVTRPDSTLTKMLKCRHCPYVSSRRADVQDHEAMHSSSEEPVIPCADCSFTCSRRDVMIAHTEMHAGCLGTVHCLVDESRPDSQQLSDLATLLGLSHTPMLGAEPDLRDTRLVHCCDKCPARFLCEKELRIHLRYHTTDLAYSCQWCSYAARQPSHLSAHQKAHSSDYQERTKVLLSLYGHSQRFPPPATACVEAEVQDGDDVGPNVAWIVVEINSSYNSGDNGASSAAQRTGNQVFTCAKCPARYFKLDALEYHMTLHGSNNRFKCNDCDYSSKTAQNLVKHQVVHRRHNESNSEASSPPANIVQATSPSHTASSPDPQFGLFMRGNPNFVYPGYLRNGRLKEKRYKCHKCPSAFEKREQYRVHLTLHGAKQRYRCETCDYSVKYYANYAQHQKKHLANAEAQASRRQHEDDRISVESDSDAIGPASRPGKSLRSPAAGPVYLFTGNNNGAFNAAYNNNITLQPSNQDKQSLLLMQRKGIISSTGEVEHETIRCQSCPFSTTDKDTMDAHKRRHGIERMTPPCPHCDYVPRKDENVGDHVRLHFTRLYKPESYLIVELLTLMMEKAPVNDKEEKQQHPKELLFKECVDGRFLPLAESTHSHSLNTSSSSTVNVLKEKVIVDPNTGETKHLSV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00769979;
- 90% Identity
- -
- 80% Identity
- -