Basic Information

Insect: Dinoponera quadriceps
Gene Symbol: -
Assembly: GCA_001313825.1
Location: NW:420208-431956[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 0.024 1.4 8.7 0.3 2 20 219 237 219 239 0.94

2 17 0.28 17 5.4 0.5 2 19 247 264 246 267 0.91

3 17 0.12 7.3 6.5 5.0 2 23 282 304 281 304 0.91

4 17 0.00074 0.043 13.5 1.2 1 23 675 698 675 698 0.97

5 17 1 61 3.6 1.0 5 23 705 724 704 724 0.94

6 17 1.5 88 3.1 0.7 1 21 777 797 777 798 0.88

7 17 8.3e-07 4.9e-05 22.8 0.3 1 22 959 980 959 980 0.96

8 17 0.00068 0.04 13.6 0.2 3 23 988 1009 987 1009 0.93

9 17 0.52 31 4.6 3.5 1 23 1019 1042 1019 1042 0.90

10 17 0.71 42 4.1 0.1 2 20 1069 1087 1069 1089 0.89

11 17 0.27 16 5.4 5.1 1 23 1130 1153 1130 1153 0.91

12 17 0.023 1.3 8.8 0.3 1 19 1200 1218 1200 1220 0.94

13 17 0.013 0.76 9.6 4.3 1 23 1228 1251 1228 1251 0.93

14 17 0.27 16 5.5 4.0 3 21 1295 1313 1294 1314 0.94

15 17 0.1 6.2 6.7 0.3 1 23 1326 1349 1326 1349 0.93

16 17 0.0046 0.27 11.0 0.7 1 23 1555 1578 1555 1578 0.97

17 17 0.59 35 4.4 1.7 2 23 1602 1624 1601 1624 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	0.024	1.4	8.7	0.3	2	20	219	237	219	239	0.94
2	17	0.28	17	5.4	0.5	2	19	247	264	246	267	0.91
3	17	0.12	7.3	6.5	5.0	2	23	282	304	281	304	0.91
4	17	0.00074	0.043	13.5	1.2	1	23	675	698	675	698	0.97
5	17	1	61	3.6	1.0	5	23	705	724	704	724	0.94
6	17	1.5	88	3.1	0.7	1	21	777	797	777	798	0.88
7	17	8.3e-07	4.9e-05	22.8	0.3	1	22	959	980	959	980	0.96
8	17	0.00068	0.04	13.6	0.2	3	23	988	1009	987	1009	0.93
9	17	0.52	31	4.6	3.5	1	23	1019	1042	1019	1042	0.90
10	17	0.71	42	4.1	0.1	2	20	1069	1087	1069	1089	0.89
11	17	0.27	16	5.4	5.1	1	23	1130	1153	1130	1153	0.91
12	17	0.023	1.3	8.8	0.3	1	19	1200	1218	1200	1220	0.94
13	17	0.013	0.76	9.6	4.3	1	23	1228	1251	1228	1251	0.93
14	17	0.27	16	5.5	4.0	3	21	1295	1313	1294	1314	0.94
15	17	0.1	6.2	6.7	0.3	1	23	1326	1349	1326	1349	0.93
16	17	0.0046	0.27	11.0	0.7	1	23	1555	1578	1555	1578	0.97
17	17	0.59	35	4.4	1.7	2	23	1602	1624	1601	1624	0.95

Sequence Information

Coding Sequence: ATGTGCTGTACTGAGCGCGTGACTATTTCCCCCACATGGCCGCACGGGCGCATTCCGATTACAGCTTGGGCACAAGCGACAGACGGCGTAGTGCACACGCTGATCGGTAAAAGTATTGCTAGTAACATGGCTCGAGTTGTAGTATATGAGAGAGTCGTAGATGCTGTTCAAACCAAGATCCATATAGGCCAAACAtccAATATAGATATCCAGAATGGAATAAAGATTAAAGAAGAACCTGTCGATGCAGTAATGGATATCAATGCTACCAACGATTATAAGCTTCTAAGGAGTCATTCTAAACTATTTGAAGGTGACAAATCATTATTATCCGAGAACGAAACACAACGTAAACACGTAAAccataaaacaaaaaagtgTGTACGTGATGATTATTCCGAGGATTCAGATAGCACTAAACTAATcaagattattaatttaaaacgtaAAATTACAAGAATTATGCGTGATACTTCGCCGATAACTATAAAGAAACCAAAATATTCCGATAAAATTGTCACCAATGACCATACCTATGTATCTAAAACAAAAATCcaaaatttaaatagaaaaaaggaCAGGCGACTCATCGCGTCAAAAACAGTTACTACGACTAAAACACAACATATAAACACTGCAGAAAAAAACATTCGCCAATGTGAAATATGCTTCATGATATTCAAGAACTATCGCAGCCTTAATCTGCATCGactatattttatgaaaattggaaattttctgTGCCGTTCTTGTAAAAAGTATTTCCCAACACAAGGACTATTATACTCACATTCTGCAAGCTGTCGCAAAGAATATGATTATTCTCACCAACATGATTTACTACACTGTAATTATTGCAGTCGTCAGTTTAAGAAAAAAGGCGTCTTACAATCTCATTTGTTTCACTTACATATGGAATTAATCTCTCCGAATAATGTAACTGAAactaaaaattcgaaaatcgtCCCTGAAAGTATATCTTGTAAGTATAATACTTCGAGGAATGACTTACATGAAGAGACGCCATGTCCAAGTAATTTTGATAAACCAAAAGAATTAAGTACTATGCTTATTAATAAGAATTGTAAACAGTCTCGAAATAGTTTCGATGACACAACGAAGATTGATAAATTAGTTGAAGAGGAGCCATCCAATGAGGAAATGCCacctagaaaaaaattacgacaGCTAACATTGAATGAATGtattgaattttgcaaaagaaAACACGATGTCAAGATTAACCAAAAGAAGTTAAATATCACGGAAGGTAGTTGTTCCTCTACATGTGCTTCGAGTCATGATGAACAAGTAGGAGAAAATCGCAAACCAAAGCTTTCAGAAGAGGCAGTACACAATGGACAAGTTGATACTTCAACTAAAATatccaataataatttaggACAAGTGACAAATGTTTCCACTTTAGCGCAAAGTGAAAAGCATGGAGAATGTCCTACCAAAGAACCTTTTGTAAAATTGCATGCAAAGGTTGAAACAATGAAGTGTTTTCTGGAAAGTCTTGCAGATACAAATATCAAAAGTGAACTAGCCGAAAATCAAACAAATAGCACAGTGTCACACGAGCATAGCATTCCCTATAGTTTACGGCCTATGCGGGCTATTCGGTTTTCGGGAGATTTAGGCAGTAAGTTACTTAGAAAATCTTCGCTTAACTCAAAAAGCAGTATTGAAACGAAACAGAATGTAATTAGTTTAGACAAAGTAAATTCAGGATCTTCAACAAGTAGAAATCATTCTAGTTTCAAGGATTGCTCAATTACTTTAAAGAGATGTGATGAAAAAGTGGAAAATCATGATCCCATTTCTACAGTTCAAACTACATCTGAACAAAAATTAGTCTCCACAATTACTGAGCCGAAGTCTGCGCAATCTCAAAAGAGTAGTACAAGcaataacgttgtgttaaaAAAGTTAGAGGTTTCTTTGGAACGTTTAAAAACTGAAGCAGATGAAGATAGCCCGGAACTGGAAAAGGACGCCGAGACACAGGATAATTGCTTTTCATGCGGAATCTGCAAGAAGAGTTTTCcaacaaaattaatgaaacgtGCACACATTAAGTCGTATCATATAGCATATATGTCAAGTATATGCAATGCGCGATATACGATGAAACACAAATTACTTCAACATTACTTGCGCGAACatacatttaaattaaatgagTGTTGTGTTTGTAATGAATTATTACTCGATTCTACAGAGCTGAAACaacatttaaattttcattgtttgAAATATCTCCAAAATAAAAACGATCAATATCccataaatattgatataaaatgcTCGACTAAGGGGACTTTCAAATGCATTAAATGTGATGAAAAGTTTTCGTCATATTTCTTGTGGTCAGAACATGGTCGTTATTGTCCGAACATGATCGTAATTGACAAGGAAGTGAAAGAAGTTCAGGAGAATCCTACTAAGGAAGCGAACGTGTCTTCAGAAGTCATTCTTCAAGCTGATCACAAAGAAGACGCCCATGAAAGCACAGTTAAACATGATGAAAGGATTCAACATGATGCCTCACCTGAACTTCTAGATAATAAACCTTTAGAAAATGCGAACAAGAATCAAGTAACGTCAACTGATGAAGAGCTGAGAAGTAACGAAGAGGAGCCGGAAATCATCATTCAAGATTCGAGCATCATTGAAGAGGATCTGAGAATTaacgaaaatgagaaagaCTCTTTTAGTAGGAAAGCCATTTTCATCGTGGAAAATGTTAGATCTGTCAACAAATCACAAGAGCTTATCAAGCTTCCGGAGACTAATAACCCCACAATCATCAATGACCAGAATATTGCAAGTGTACAGCCGAACAGAATCACAGAATCAGGTAAGACGTATCCATGTGATATATGCGGGAAGCGATTTCAGAATAAGAAGAACTTGGAACAACATATACGCAGTTACAGTCGCGTCAATGTTTTCTGTCCGCTATGTAATACTGCATTCAGCTCAAAACGTTTCCTACAAACGCACATCGCCGCGGCGCATGTGCCACAGCTATCGAGGAACTATAATTTCCACTGTGTGTTTTGCAATCAAGGTTTCACAAAGAAATATGAGCTTCGGCCGCACGTGTTGCACCTGCACGGCCGACAGATGCTAGAAGCAATTATGCCCAATTTTCCCGATAATCAAGGAAAAGAAGAACCGGATAACGGAAATGCGACGTGCACCGTATGTAACTTGGCATTTGAGACCCTTGATCGTTACGTGGAACATACGATGTATTACTACAAGGATCACAAATTCACATGCACGATCTGCTTGAAAGATTTTCAAGGCATGTACATGTATCATCATCATAACAAGCTCACTCACTACTCGGAGGATAAACGCAAGTCCTACATTTACACTTGCAACATATGCAATGAGGGTTTCAATCACGAATTACATTTCTATTCACACAATATGCATGTGCATTCCAAGAAAGAAAGTTCAACCGATATCGCGGGGCAGCGCGCAGAAAATAATCAGCCGGTAATCAACgtggaggaagagggggaagTTATAGATTTGTCTACGAATCAACAAAAAAAGGTTGAACTATTGTCCCCTGAGTTCATTTGCCAAATTTGTCAATTACAGTGCACGGATGCTGATGATTTGAAAAGTCACGAATTATTCTACACCAACGATGGCGATTTTAAATGTAACCTCTGTAGCAGACGGTGCAAAACTCTCGATTTACTTAATCAGCACAAGAGCTTAACCCATATCTGCCGTGATGTCTATAATGAATATATGTGTCCAAACTGTGAAGAAATATTGCCATCGGTCACTTCACTGAAATGTCatgaaaaacattttcatgTTAACTTAGTGTCCTGCGATAATGCGAATAATTGTAAGAACTGTAGccagacatttttttcaagcACTGAATATAAGGAGCATCAGTGTAAACCTACCAGCAGTAAGACTAAAGAGAAATACATATATCGTTGCTTTTACTGTGATATgaagtttctttctctcgatatgATCCAGGCGCATATTATTCAAATTCATTTCGGTAAGCTGTTGGCTAAACATATTGCTTCAAAGGCGGAACTACCCACCGTCGTTAGTGACGATAAGATTCAGAAGAAATCCATTCCGCAGCTAGTCGACCAAGTATTGCTGTCTAGAAAAAATCTATCTCAATCTTTTCCGCAATCTGATAAAAGCCCGAACAATACTTCGACTACGCAGGAAACGCAGGATCGAGTTGTCGTTGAACCAACTCCAGATCAACTCAAAGCTTTATTCCTAATTGATGTTGATAAGCAAACGGCTCCGAATGAATCTGAAGCCGTTATATCCACGacgatggaaaaagagcagaaTAATCAATCTAAAGCTGACACTCCATTTCGCACATCCACCGGATCAACTAATCACTCAAACCCCAAGAAGCATCATAAGCAATTTTTATCTGATTCCTTTAATATATCGTTAGAGCAAATGTTAGATGGGCATTCGATCTTCTCGTCAACTGAGTCCGCTAAGAAATCTAAAGTAACTTTTACAAGTGTCCCATCGAAGCCAGTCACCGGATCGAACATTCCAATTGCCGTGGCGCCCATCCCTAGAAACGAAGAGGTGCAATTACAGAACCATGTATCAGTGAATAATAATACTGATTACACTTGTCCGTTGTGTCCATTACGGTATCCGTCTTTGATGTATTTCCACGCTCATCTAAGATATATTCACTCGGATGTAATCCGGAATGATTTGGTTTATCCACAATTGGACCAATTGACCGAGAAGATTCCTGCAATAGAATGTCTATTGTGTCCACATATCAGCACTAACGAGAAGAGATACAAGAGACATTTACGATATTCCCATTCGCCTCACAAGTATTTCATGAATTTTAAAGAGACGAAGAAGATCAGTAACGCGAGCATTTCCTCAAATGGACGAACAGTAATATCAGAATCACCCGAAGTTATTACTGTGGAGGATGACGATGATAATATCAAGAGCACCTTAGTTGGGCCGACAACTGCCAAAACAGCTGTCGAGGAAACCACGCGCATTCCTAACGTAGAGAATGAGAATATTGGTAAATTAAAAGTGAAACCCTTCGCAAAGATTATCGAGAACTTGACTATTGATCGTGAAATGGAGCTATTAAAAGGAAGTCACTAA
Protein Sequence: MCCTERVTISPTWPHGRIPITAWAQATDGVVHTLIGKSIASNMARVVVYERVVDAVQTKIHIGQTSNIDIQNGIKIKEEPVDAVMDINATNDYKLLRSHSKLFEGDKSLLSENETQRKHVNHKTKKCVRDDYSEDSDSTKLIKIINLKRKITRIMRDTSPITIKKPKYSDKIVTNDHTYVSKTKIQNLNRKKDRRLIASKTVTTTKTQHINTAEKNIRQCEICFMIFKNYRSLNLHRLYFMKIGNFLCRSCKKYFPTQGLLYSHSASCRKEYDYSHQHDLLHCNYCSRQFKKKGVLQSHLFHLHMELISPNNVTETKNSKIVPESISCKYNTSRNDLHEETPCPSNFDKPKELSTMLINKNCKQSRNSFDDTTKIDKLVEEEPSNEEMPPRKKLRQLTLNECIEFCKRKHDVKINQKKLNITEGSCSSTCASSHDEQVGENRKPKLSEEAVHNGQVDTSTKISNNNLGQVTNVSTLAQSEKHGECPTKEPFVKLHAKVETMKCFLESLADTNIKSELAENQTNSTVSHEHSIPYSLRPMRAIRFSGDLGSKLLRKSSLNSKSSIETKQNVISLDKVNSGSSTSRNHSSFKDCSITLKRCDEKVENHDPISTVQTTSEQKLVSTITEPKSAQSQKSSTSNNVVLKKLEVSLERLKTEADEDSPELEKDAETQDNCFSCGICKKSFPTKLMKRAHIKSYHIAYMSSICNARYTMKHKLLQHYLREHTFKLNECCVCNELLLDSTELKQHLNFHCLKYLQNKNDQYPINIDIKCSTKGTFKCIKCDEKFSSYFLWSEHGRYCPNMIVIDKEVKEVQENPTKEANVSSEVILQADHKEDAHESTVKHDERIQHDASPELLDNKPLENANKNQVTSTDEELRSNEEEPEIIIQDSSIIEEDLRINENEKDSFSRKAIFIVENVRSVNKSQELIKLPETNNPTIINDQNIASVQPNRITESGKTYPCDICGKRFQNKKNLEQHIRSYSRVNVFCPLCNTAFSSKRFLQTHIAAAHVPQLSRNYNFHCVFCNQGFTKKYELRPHVLHLHGRQMLEAIMPNFPDNQGKEEPDNGNATCTVCNLAFETLDRYVEHTMYYYKDHKFTCTICLKDFQGMYMYHHHNKLTHYSEDKRKSYIYTCNICNEGFNHELHFYSHNMHVHSKKESSTDIAGQRAENNQPVINVEEEGEVIDLSTNQQKKVELLSPEFICQICQLQCTDADDLKSHELFYTNDGDFKCNLCSRRCKTLDLLNQHKSLTHICRDVYNEYMCPNCEEILPSVTSLKCHEKHFHVNLVSCDNANNCKNCSQTFFSSTEYKEHQCKPTSSKTKEKYIYRCFYCDMKFLSLDMIQAHIIQIHFGKLLAKHIASKAELPTVVSDDKIQKKSIPQLVDQVLLSRKNLSQSFPQSDKSPNNTSTTQETQDRVVVEPTPDQLKALFLIDVDKQTAPNESEAVISTTMEKEQNNQSKADTPFRTSTGSTNHSNPKKHHKQFLSDSFNISLEQMLDGHSIFSSTESAKKSKVTFTSVPSKPVTGSNIPIAVAPIPRNEEVQLQNHVSVNNNTDYTCPLCPLRYPSLMYFHAHLRYIHSDVIRNDLVYPQLDQLTEKIPAIECLLCPHISTNEKRYKRHLRYSHSPHKYFMNFKETKKISNASISSNGRTVISESPEVITVEDDDDNIKSTLVGPTTAKTAVEETTRIPNVENENIGKLKVKPFAKIIENLTIDREMELLKGSH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -