Basic Information

Gene Symbol
CSRNP3_1
Assembly
GCA_001313825.1
Location
NW:273651-324827[+]

Transcription Factor Domain

TF Family
CSRNP_N
Domain
CSRNP_N domain
PFAM
PF16019
TF Group
Unclassified Structure
Description
This presumed domain is found at the N-terminus of cysteine/serine-rich nuclear proteins. These proteins act as transcriptional activators [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 0.13 1.4e+03 -1.8 0.3 64 103 291 330 249 393 0.54
2 3 0.27 2.8e+03 -2.8 1.0 83 83 409 409 340 495 0.58
3 3 2.9e-101 3e-97 324.0 7.7 1 218 740 950 740 950 0.93

Sequence Information

Coding Sequence
ATGGAATCACCTTCGGCCCGGGGCGTTCTCGTTGAGGCCCAAGAGGATTCCACCTCAGTGGAGCTTGAAGGCAGCCCGGCGACGTCCGACGCGACAACACCAGCCACTGCTactccgacgacgacgacggcggcgacgctGACGACTACGACGTTGTCGTCAGCGGACGCCACCGCCACTCGTCTCGCTGGCGCCGCATGCAAGGACGTGGTGATAGTGTGCGAGAAACTGGaggagcgagcggacgagcgagtcGCGGAGGTACAATCGAGTGATTATTCTCGCTCGTCGGTAGAGAGCCAACCTCGGGCAAAGGTGGACATGGGTCTCCGGATGAGCAAGGACGCCGACGGGGAGGGGGCGGTGAACGACGCGAAATCGCCGCAGGACGCTTCTCCCGGAGCTGAGGTGTCCTCGAGCACGAGCGAACGTTGCGCGGAGGAGCAGCGGAGCAAGATCGACGACCTCGTGTCGCCTAGCGCGTCCAGGAAGAGGCCCGCCAGCAGCGACTTCTTGCCGATCGGCGCGGAGATGAAGAAGATCGGCGTCGAGATCTCGGAGAAGGAGGCGGTCCAGCTGAGGAACGACGTGAGGAGGTTGTCACCGGTGCTGGTGAGCCTGCGAGAGAGAACTCTCGGCGAGGTGTCGCTCACCGCGGAGTCCTGTCTCTTCGGGGACGAGGCGACGTCGAGGAGCAACGCCGCTCTGCCGGAGGCATCGCCGGCGGAGGACAAGTCCAGGACTCGGAGCGTCGGTGACTCGAAGCTAGACGCTGACGATCACGAGGAGACCGTCACCCCGTCGATAGCGGAATGTAGCAGCAGCGACACTCAGGACAATCCGGACTGCGTCGAGAAGACGGACCGGCAGGAGCAGGCGATCGATGTCGAGCTGACTTCCGTTTCATCGAGATGCGACAGTTCCGGCTCGACCGCGTCGTCGTTGACGCAGAACATGGAGGTCGAAGACACCGGCACCGCGGACGCGTCCATTCCGAAGAAGAGCGTCGAGGTAGCGTCGAGTTCGTCGGTGCCCTCGAGTCCCGTCTGTCGAAACTTGGTCGTAATGCTGAGCCACGTCGATCGTCTTCAGAATCGTATGATCCTGAAGAAGGCCGGCAAGAACATCTGGAGTAGAGTCGTAAAGGAGGGTTCGCTCAGGTCCGAGAGAAGGACGAATCCCGTGAAGCAAAAGGCAGGGGAAGAACAAAAAGAGGAAGACGGGGCGGtagaagaaggagaaatagTGGAAGAGTGCCGATCGGTCGAATCGACGGAGTCGAACGCGGATttcaaaaagaagaaatcgtGGAAGGATGACTCATGCCCGTCGTCCAGCAAGTCGAGAACCCGCGAGCCGACGAAGAGTACTCCAAGCCAGCAATACCCAGGCGTAAAGACGTGCATGGTGAAGTTGGAGCGAATCGATAAAACGAAACAGGCCCAGCAGGAGGACACCGAGTCCACGAGGAAGTTGTTGGACAAGGAGGAATCGGCGATACCGGTGGAGGTGATAGGTAAGCTCTCGGAGCACGAGGAAGTGGTGCTGGCGAGCTCCTCGCCCTCCGGCGAGGACAGCCAGGTATCGAACGAACTGGACTCGTCGGAGACCGTGCCGAGTTCGCCGGAGGAGCCGGCAGAGGAGATCCCCGCGGACGTCGCGGAAGGAGTCGATACCGAGACGGAGACGGAGACCGGCTCCGACAGCTCGGAGGTGTCGCCGATGACGAGCAACATCAGGCTGCGCGACGTCGACGTGCCGTCCGATCAGCTGCCCTGCGCCGAAGGAGTGCCGCCGCTCTGTTGCGTGGAGATGCCGCCGATCATGACGCGACTAGAGGCGGAACGACCGGAGCCCTACACCGAGGACTCCGCCGAGAGCTTGACCCTGGCGACCGGCGCAAGGGACGAAGTCAGGTCGGATGGCAGCGACTCTGGTTTGGGCAGTGAGATCCCGGGCGACCCGGGACCGGCACCAGCTCCGGAGAGCGACTCGGAGACGTCGTTCCTCGACAGGATACCGGACGATATTCTCTCCGACAAGGAAAAAGCGGTGAGCCAGCTGGACGGCTTCGTGCCGACGTCAGGAACGCCCGGGACGCCGCAGCCGCCCCTCACGAGCTTCCGCACGCCGCCCAAGAGCAACCTGAAGCGCAGGCTGACCGACTGCATGGAGGGCGAGTCGTGCCCCAAGAGGAGCAACACGGACGAGCCTGTGAAGAAGAAGCGCAACATCCAGTTCGACGCGGTCACGGTCTACTACTTCCCCAGGGCGCAGGGCTTCACCTGCGTACCGTCTCAGGGTGGCAGTACGCTCGGCATGAGCGCGACGCACACGCACGCCGAGAGGTTCTCGTTATCGGAGCACGCCGCCGAGCAGAGGCGGATTCACCGCGCGCGGTTGGCGCAGCTGCGCTCGGAACGTGCGGCGAACTGCGTCGCCGAGACGGCATCGAGCTCCGAGGACCCCAGCGACGACACGGACGAGGAGCCGAGCGACAACGAGGAGCTCGACATCGACAGCTACTACTTCTTGCAGCCGGTGCCCACGTGGCAACGGCGCGCCCTCCTCAGGGCCGCCGGGGTGCGCAGGATAGACGCGGTAGAGAAGGACGAGTGTCGGGATATCAGAGCGAGCAGAGAGCACTGCGGATGCGGCTGCAAGGGATACTGCGATCCTGAGAGCTGTCCTTGCAGCAGGGCCAATGTCAAATGCCAGGTGGACCGAGTCGGTTTCCCGTGCGGCTGCACCCGGGACGGCTGCGCCAACAGCTCCGGCAGGATCGAGTTCAACCCGGTGCGGGTGCGGACCCACTTCATCCACACGCTCATGCGGCTCGAGCTGGAGAAGAAGcagcgcgaggaggagggcggCGAGCACGAGGTAGCGGACAATCAACAGGGCAGCGGCAGGAATGGCGGCCCCTTACGGGACATCAATATGGGCACCGTGATGGAGGCCACCGGCGGCGACGGCTGCGCGCCGGGTGGGCCCGGAGGTGGCGGTGGCTTCACCACCTTGCACTACGAGAGCCACGAGGGCGTGGCCGCCGGCGTGGTGAGCGCCGGCTGCCAACCGGAGGTGCCCGGCACACGGGAGGACAGCCTCGACCTGTACGCCATCCGGGACGACTGTTACCCGAGCGAGGACGCGGTGGACGGCAGCCAGTCGGGCCAGCGGAAGCTGCATCCTGAGTTCAGCCAAGCCTTCCAGAGCTTCTCGAGCCAAAGCGCCGGAGGTAGCGGCgccggcggcggaggaggcggtggcggcggtggcggcggcatGAGCTTCCAGCAGTCCTCGTACCAAGATTACCAGCCGTACGCGAATGTACCGTCCACGTCGCGGGTGCAATTCCAGCCGCAGTTCCAGTCGATGCCGACGAGCCCGGGTTTCTCGCACTACGGACCCTACGGCGGCCAAGATGGCGGCGCGCTCCAGCCCGGCTGTCAGGTGCACCCGAGCCAGCAACACTCGTCCTACGAGACGGCGTTCGCGCAGGACGAGAGCACCGGCTCGCAGTACACGAACCTCACCAACTCGGTGCAGCCGATGAACGCGGTGGTGCAGCAGATGGGCAAGCTGGAGCCCTTCTCCGAGCTCCTGTCCGGCAGGTACTCGTACTACGGCGAGATGGAGCCGCAGCAGCACGGTACTTATCACGCCGCCGGCAACAAGGTCGAGATGGAGGCCGGGCATCCGgccgtcgcgagcgagcagcAGTCGGAGAGCACCGAGGACTGCGACGAGAACTTCGGCGAGATCATCAAGAAGTCCATGGTGGAGACCGTGTCCGCCTAG
Protein Sequence
MESPSARGVLVEAQEDSTSVELEGSPATSDATTPATATPTTTTAATLTTTTLSSADATATRLAGAACKDVVIVCEKLEERADERVAEVQSSDYSRSSVESQPRAKVDMGLRMSKDADGEGAVNDAKSPQDASPGAEVSSSTSERCAEEQRSKIDDLVSPSASRKRPASSDFLPIGAEMKKIGVEISEKEAVQLRNDVRRLSPVLVSLRERTLGEVSLTAESCLFGDEATSRSNAALPEASPAEDKSRTRSVGDSKLDADDHEETVTPSIAECSSSDTQDNPDCVEKTDRQEQAIDVELTSVSSRCDSSGSTASSLTQNMEVEDTGTADASIPKKSVEVASSSSVPSSPVCRNLVVMLSHVDRLQNRMILKKAGKNIWSRVVKEGSLRSERRTNPVKQKAGEEQKEEDGAVEEGEIVEECRSVESTESNADFKKKKSWKDDSCPSSSKSRTREPTKSTPSQQYPGVKTCMVKLERIDKTKQAQQEDTESTRKLLDKEESAIPVEVIGKLSEHEEVVLASSSPSGEDSQVSNELDSSETVPSSPEEPAEEIPADVAEGVDTETETETGSDSSEVSPMTSNIRLRDVDVPSDQLPCAEGVPPLCCVEMPPIMTRLEAERPEPYTEDSAESLTLATGARDEVRSDGSDSGLGSEIPGDPGPAPAPESDSETSFLDRIPDDILSDKEKAVSQLDGFVPTSGTPGTPQPPLTSFRTPPKSNLKRRLTDCMEGESCPKRSNTDEPVKKKRNIQFDAVTVYYFPRAQGFTCVPSQGGSTLGMSATHTHAERFSLSEHAAEQRRIHRARLAQLRSERAANCVAETASSSEDPSDDTDEEPSDNEELDIDSYYFLQPVPTWQRRALLRAAGVRRIDAVEKDECRDIRASREHCGCGCKGYCDPESCPCSRANVKCQVDRVGFPCGCTRDGCANSSGRIEFNPVRVRTHFIHTLMRLELEKKQREEEGGEHEVADNQQGSGRNGGPLRDINMGTVMEATGGDGCAPGGPGGGGGFTTLHYESHEGVAAGVVSAGCQPEVPGTREDSLDLYAIRDDCYPSEDAVDGSQSGQRKLHPEFSQAFQSFSSQSAGGSGAGGGGGGGGGGGGMSFQQSSYQDYQPYANVPSTSRVQFQPQFQSMPTSPGFSHYGPYGGQDGGALQPGCQVHPSQQHSSYETAFAQDESTGSQYTNLTNSVQPMNAVVQQMGKLEPFSELLSGRYSYYGEMEPQQHGTYHAAGNKVEMEAGHPAVASEQQSESTEDCDENFGEIIKKSMVETVSA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-