Basic Information

Gene Symbol
NCOR1_1
Assembly
GCA_001313825.1
Location
NW:208218-284610[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 3.8e-08 2.3e-05 23.7 0.0 3 43 827 867 826 870 0.96
2 2 1.9e-15 1.2e-12 47.0 0.5 3 43 1278 1318 1276 1321 0.96

Sequence Information

Coding Sequence
ATGGAGACAGTGGGCAAGCAAGTCCAGGTAGTGAGTGGATTGGGGGTGGGGGGTCCGGTGGGTCCTGTGGGCCCAGTGGGGGGTGAATTGCATCACCATCATCACCCTCACCCCCACGCCCACCCTTCGCATCCGCAGTCCCACCTCCACCCTCACCCCCATGGCTCCCATGGCCACTCGCTCGTCGGTGCTACGTCGAACCCCGGCAGGGGTCAGGCCCAACCACCGACCTCGCATAACCAACACTTACCGGCGAGGTCCACCCCCATACCGTTGCACAGACAGACTCAGAGCTATGTCAACATCAAGAGCAGCAGCAGCCCGGTATCGCCGAGGACGGTAGGGACGGGGGCGACGTACGTCTCGGGTGGAGCGGCCGCATCCTCTACGGGGACTGCGGGCGCGGCTGCAGCGGCGACCGCAGGTGGCAATGCCGCCGCTGTTGGTGGGCCCtcgatcgccgtcgtcgccagCAGTGGCACCTCCAGTGGCATCGTCAGTGTATCCAACATCATACCGGCCGGTAGCAGCGGGGGTGGTGGCAGCGGAGGAGCGAACAGCGGCGCgaacagcaacaacaacaataacagcggcggcggcggcggaggtggtggtggtggtagcggcggcggcagcggcggcagtGGCGGCAGCGGGGGAGGTGGCAGTGGCGGAGGCAGCGGCCCCGGCGGCAGTGGAACAACCGGTGGAGGTGTCAGCGGAGgtagcagcagcggcggcggtgtcgGCGGAGGCGGCGCGGGCGCAAGTTCGTCTGCGCCCGGTGGCTACGTCGCCGTGCCTATGCCTGGAGGTTTACGCTATATTCATCCCTACCCGCCAACCTCGGTGTCGACGCCGGCGGTCGCCGCTGTGGTCACCACAGCCTCCTCCCAGGCTGTCCCGGTACCTGTGCCGGTGCCCGCGCCCGCCTCCGCTCCCCCACCGACCCACCAGGCGCCCACCATCAGCcaaacgccgccgccgcttaCCGGCACTACTGCCTACGCTGCGAGAGACACGTACCGTGCCGGCACCACGAACGTGAACGAGAGGATCGCCATCAACGTGAGCAGCAGTCCTCTGTCGCAAGTCGGCGTGGGCGTCCCCGTGGGGGGTGTGGTAGGCGCAGGAGTGTCCGCCGAGTACACGGTCAGCGGCGGGATAGCCGGTGGTATGGGTGGTGGCAGCGGCAGGGACCGGCCGAGGATATCCCTGTTACCACCAGCCTCGATCACGCCAACGCCGTCGCCGACCGCGCCTGACTATCAGCATGTGTCTGCAGCCAGGAACCCGCGGATAGGCCTTATGCCCGTCCAACCGGATCAGTATTGCAGCCGCACCGCTGCTACTATTGTCATGGCCGGCGATCTGCAGGATACGCCGCCCTTCAAGAAGATCCGTCTGGGACAGCCGCCCCAGCTGGTCCAGCAGCTGCAATCGCAGCCGCAGTCCCGCTGTCAGAGTCTGTCGCCGGCTGATCCTGCCTGCGGCAGCAAGCAGGAGCAGCAGCAACACGTCGTACAGTTGCAGCAACCACTCAGGATAGACACCAGGGAGCAGCCTGCAGTGGGTGCGTACACGCCGCAGACGGAAGCGATTTCTCCTACGCTGCCAGAACCCAACACGCAAGAGGACGTGAATTACAGAAGCACCAAGGACGATCTCTTGCAGCAAATCGCCAAGGTCGACAGGGAGATTGCTAAGCGAGAATCTCAAATAAGCAAGCTGAGGAAGAAGCTAAAAGAGTTGGAAGAAGCGGCGAACAAGCCTCTGGAAGCGAGCGGTTTGAAACGTCAAGTTGAGGAACAGTCGCAGCAACCAAAGCATCAGTCGTTAGCACAAAAGATCTACGCTGAAAATAGGCGAAAGGCGGAGGAAGCTCATAAACTCTTGGAAAGACTGGGTCCTAAAGTGGAACTACCTTTGTATAATCAACCGTCGGACACGAGCGTGTACCAGGAGAATCGCACACGGCATCAGACGTGTATGAGAGCCAGACTGATATCGAGGCTGCGGAGGGAACACTCCGAGCGCACGTCATTACATCGGCAACAGTCGCAGACATACGCCATTCTCGTGCAGGAGTGGCATCGCAAGGTAGAGCGGTTGGAAGCGGCGCAGAAAAGGAAATCCAAGGAGGCGAAGAATCGCGAGTTCTTCGAGAAAGTATTCCCGGAGTTGAGGAAACAGAGGGAGGACAAGGAACGTTTCAACCGTGTCGGCGCTCGCATCAAGAGCGAGGCCGACCTCGAGGAGATAATGGACGGTCTGCAGGAACAAGAGGAAGAAACGTTgcaagatttaaaaaattccattAAAGCCTGTCAGATGGAGGATAAGAAAATGCGTTCCTACGCCGTCATACCACCTCTGTTGTTGGACACGAAGCAAAGGAGGATCGCGTTCCAAAATCGGAATGGATTGCTCCAGCCGGAGGAATTAGAAGCTCTGCACAGTGAACGTAAACTGATTAACGTTTGGAGTTCCGTGGAGCACGAATTGTTCAAGGAGAAATACCTCCAGCACCCTAAGAACTTCGGAGCGATAGCTCAATCGTTAGAACATAAGTCTGCTCCAGATTGCGTACATCATTACTACCTCACTAAAAAGGCGGAAAATTATAAACAGCTCTTGCGGAAGTCGCGCCAGAGGACGCGTAGCTCTCGAAATAATCCGAATAACAAAGTAAATAATACTAGCTCCACCATCGGACCTATCGATATTTTAACGACAGGAGTAACGACGAGGTTACAGCGAGAACAACAACAGAAGACCCAGGAGAATCCTCAAAGcaattcgacgacgacgacatctACAACTACAACGAACACCACGTCGGCTACGTCAGGTGTATCTTCCGCGACCGTGgtgactacgacgacgacgacgacgacgacgacgacgacctcgTTAAGCTCGATAACGTCCGGCGTCAGCTTAACCACGGATTCCGTAACGGCATCAATGACAACGACATCTGTCCTGAACACCATCGCGACGTCGAGCACGTCGGCGACACCGACGACATCCGGCTCGAAGGATTCCAGGGAGGCCGGCAAGGATGGCAAAGTCGACTCGAAAGAGTCCCATCCTATAAAAATGGAGTTCGGTCTGATACCGCAGCTGGACGGGTTACCGGGGAAGGATATCAAAGTAATAATGGAAGGGAAAGGCCCGATATCCTCGTCTTCGTCTGCGTTAAATACGACGAATGTCTCGGCCATTCAACCGGATTTCAAGGACTCCAGTAAGAAGAAACCAGGTTGCAGGGATACGGGCAGCTGCGGCACTAACGTCGCGACTGGCGGTAGAATAAAGGATAAGAAGAAGGAGAATCACGCCACTCCTATGGAAACCAGCGACGAGGAGGCACCGACGATCGACGTCATCGAAAGCGGCAGGCAAATCGGACCGCACGCTTGCACGGTGTGCCAAAATGTCGTCGAGGGGAACAACCACAGCCGTGCGTTGCCGCGCAGCCAAGCGTCGCAATACGGTCTGCGGGAGGATCAGGTGCTACCTGGCGCGCGCGTCTGCAACACCTGCAGATGCAAGGCTGTCCGAGGACGTTACACCGCCTGTCCGTTGCCCGGTTGTCCAAATCTGCACAACAGCTCGAAGGCTAGGGTGAAGCGACTGAGAGCGTTACCGTCGAAGTGGCTCGACCTGCCCCCGGAGATCCGAGAGCCGATCGCTCAGGAATTCCAAATACCGAATAGCGCGACGAAATGCTGCTCGGTCTGCTTCAGTCGAATATCGCGACGGTTGGCGCCGCACCTCGCCGGCGGTACCGAAACGTCCGACGACGTTGTTGACTTAATGTCACGCCAGTGGACCGACGAGGAACTGGAGTTACTTCGTAAGGCGTTGCGTGAACACGGCACCAACTGGCTGAAGGTCGCCGAGCAGATACCCGGGAAAACTAATCATCAGTGCAAGAATTATTACTTTGCCAATCGTAAGAAGCTGTGTCTCGATCAGGTCGTGGCCGAGTATTACCAATCGTTGGGGGAAGAACGAAGACCATGCCTGACGGACGAAGAGGAGAGTGGTAGTAGCACTAGTAGTTGCGACGAATTAGCCGTTCACGACTCGAGCGACACAGCCAGCGCGGGAAGTCCGGCGAACACCATGACCGGTAACGCGTCGGTGGTACCTGGCGGTTCCTCGACGTCATCCTCGTTACCGATGTCCTTCCAACGATCCACAGACCAGAAGCTTGGAGAGAAACTCTCGGACATAGCTGTGGTATCCCTAGTCCCATCCGTTGGATCGTCTCATCAGTCTTCCAGCAGCGCAGGTACTGCCGCAGCATCCAGTGGCGCCAGAGAGGATTATGACAGTTCAGCCACGGAGACAGCGGACGAAGGTCAGGGTGGTGCTGACTTAGATAATAACAGCGTCGTTGTGACACTGACGAGTGCCAGCAATACGCCGTTGCAACAACAGGGTCAGCAGCAGCatcaacaacagcagcagcagcagcagcaacaacaacagcagcagcagcaacaacaaccaCAACAACCTCCGCCTGTCGTTCATTCGCCGCCTTCCACAACGAGCAATTCCAATCCTCTTACCGTGAAGGATCTTATGCTTGGAGTTATCGAGATGCAATTGAAGCGTCCAATGGTCAATAGTCCAGCTGATAGTGGCTCGTCCGGTCCCAATAGTTCCGGCACGCCGACGATAACCAGTATATTAAAGGCGGACGTTCATCGTCACGAGATAACATTTGTGCGTGGCTACAAGCCGCCTTCGAGCATGACGAACACCTCATTGTCCAATAGAGACTCGAATTTGGCGACGCTGTCTGTCGTGTCAGGACCGCATCATGGTCATCGTTCTGCACCCAGCCCAAAGCTCGCTCAGATGCAGGCTACCATAACCCCTTGTCCCCCCACGGCGCCGAGCAGTCAGacctcttcgtcgtcgtcggacaTATTCCCGAAGGAAGGGCTGGTTGTGATGCAAGTGCAACAGGCGCTCCGGGAAACCGAAGGTACGCTGGACTTGAGCATCAAGAAGCCGCGGCAGCAGCAGGACTACAACCACTCGCTGCAGAACCTGCACAAGCCTCCGACCGGCACGCTGTACCGGCAGGAGCCGCCGTCGGCCGCTTACTATCACTCGCACGGGCCGCACCCGGAACAGGGTCGGGGCGCGAAGAGTCCGCTGGTGTACGCGTCTTCTCCTCGGCCGCAGGCGGCGGCCATCAGCACCAAGATGAACAAAGTGtccgtgccgccgccgccgccgccgccgcctcacCCGAAGCTGTCGCCGAAACTGGGCACGCCCGGTCACAAAGGCGGCTCCATCACGCACGGCACGCCGGTCTCGACCGCGCGCTACGAGGGTCTGCTGCGGCAGATGACGCCGCCCGGCGGCAACCCGACGACGGTGAGCGTCGCGACGACCGGGGGCGGCGTCGTGAACGCCAGCGCCGGCGGGCAAAAGGAGACGGGCTCGATCACCCAGGGCACACCGGTGCACCCGTTCGCGGTGGACAAGCGCGGCGCGCCGATGTACGACTACCATCGCGCGATCCGACACTCCCCGGTGACCGGGGGCGGGGGGAGCGTGCCGGCGGGGCAGGCCGGCGGCCAGCCGGCGTCGGCCGCCGTGGTGGTGAGTCACGGCGGTGCCGGCCAGTACAACTCGTACTCCGGCCGGCCGCCGCCCAGCTACACCATGGAGCAGCTCTCCTCCCGGCAGATCATCATGAACGACTACATCACCAGCCAGcagatgcacgcgcgcgcgagaggcggGGGGACGGCGGCCGGCGCCGGCGAGACGGCCGCCGGTAAGAGCAACGAGcagccgccgcctccgccgccgcctcccTCGACCTTGTACTACGCGagcacgccgccgccgccgccgcctcagACGCACACGCAGCCGCGGCAGGGCGTCATCCAGAGGCACAATCCGCAGAAGCAGCTGCACTATCAACCGCCGCCCGGGCTGGAGGCCTTCTCCAGCCTGGTGGACGTGGCGGTGCAGCAACCCAGTCTTCCGGTGCCGCACCCCCACGGGCCGCATCCGGCGGCCtccgccggcggcggtggccACGAGGGCCTCGGCAAGACCATGGCCGACCGGCTGCTGGCCGATCATTACGTCGACAACAACCGGGCGTTCCGCGAGCAGGAGATGCAGCGGCTGCAGGAGCACCGGATGGCGATGCAGGCGGAGCACAGGATgcaggcggcggcggtcgcgcaTCACCATCAGCAGCGCGACCGCGAGAGGgagcgcgatctcgcgcaTCTGCGGGAGAAGGAGGAGCACCGACTGCACCGGGAGAAGGAGATGCAGCAGCAGTTCGTCGAGCATCGTCTGGTCGTTCAGCAGCGCGAGAAGGAGATACAGCAGCAGGAGCAGCACGCCCAGCGGCTGGCCCAGCAACAGCGGGAGAAGGACATGCAGCACGTGGTGGAGCATCGTCTGCCCATGCAGCGGGAGAAGGAGATGCAGCAGCACGAGCAGCAGCACCGTATGACCGTCCATCAGCAGCAGCGGGAGAAGGAGCTCCGGCATCAGATGGTGGTGGCCGCTCAGCGCGAGAAGGAGCACCAGGAGCACCGTCTGATCGTCCAGCAGCAGCACCGCGAGAAGGAGATCCAGCAGCAGGAGCAGAGGCTCGCGATCCACCAGCAGCAGCGCGAGAAGGATATCCAGCAGCGCGAGCGGGACCTCCAGCATCTCCAGCAGATCCAGCAGCAGCAgatgcagcagcagcagatCCAGCAGCACATGCAGCAGCAGCGCATGGAGGCGGAGAGGAGGCACATGGCGCATCAGATATACAGAGATCAGCAGCAGCTCGACCGGGACTCCTCGCGGCTGTTGAACAGCGGTTTCTCCCAGCAGTCATCGCGGTTGCAGCAGCAGTCGCAGCAGCATCAGCAGCAGTCGTCGTCCAGGCAGAGCCAGTCCTCGTCCGGTCAACAGCAGAACGACTCGTCGTCGACACTGACCGCCGCTAGTCTAATCGACGCCATCATAACGCATCAGATCAATCAGAGTGTCGAGAATTCCGGCGGTAGCGGGTCCTCTGCTAATCAGCCTACGCGCGCGGGCGATCGCCTCTTCCAGGGATTTCATCGCGAGGCCGCGCAAGAATCCAACGGTATTGCGCACAGTCCTGCGGGCGACGGAGTGGGCGGCGGTGCCAGCGGAAATGGAAGTGGAGGCAACAAAGCGATCACTCTCGGCGAGCACGTCGAGCACATCGTGTCGAAAGATTTCTGCCCGCCGCACTCATCTTACAGACCTTACACCGGATACCAAATTCCCGAGGATCAGTGGAAACGACGGAAAATGAACGAGCCGGACTCGGTGAAGACTGGAGACGAGCGTCAGATAATACGCGTCGcccaacagcagcagcagcaacagcagcatcAATCAGCGTCCTCCTCCGTGGGGAAGCAACAATTCCAGCATTCTGTCGAGCCCGTCTCGCCCCCGGAAGCTACCAGCAATCACTACGGGCGTCGTTTCTACGAATCGACCACTGCCACATCCACTTCCGGTACACCCTCCAACAAGCCCCATCTGTCGCCGTTAGATTACGTAAAGAACAAGATCGTGGAAGTGATGCGAACGTCCGAGGACGATAAGGCTGCTGCTGGCAGCGGTACCGCGGTTTCCTCCGACCGgaatggcggcggcggcggcgtcagCGACAAAACGGCGGACGAGAAGGTGGCGGTGGCGAACGCGGAGAGGAGGAGCCCGTCCGTCGTCGGCGGCACCACCGGCGGCGAAATGGTGGTCGACGAAGCGACCACCCCGCAACCACCGCCcgcaccggcggcggcgccgacGAATTTCTATCCGTTCAGCGCGTTAGGCGTGCACACGGGCCCACCGCCGGCGCCGCCACCCACCGCCACGTCGACTGTCTCCGCCACCGTCACAAAGTCCGAACAGATGCAACCCGAGCCGGCGCCGTTGCTCTCGGCGCAATACGAGCCACTCTCGGACGAGGATTGA
Protein Sequence
METVGKQVQVVSGLGVGGPVGPVGPVGGELHHHHHPHPHAHPSHPQSHLHPHPHGSHGHSLVGATSNPGRGQAQPPTSHNQHLPARSTPIPLHRQTQSYVNIKSSSSPVSPRTVGTGATYVSGGAAASSTGTAGAAAAATAGGNAAAVGGPSIAVVASSGTSSGIVSVSNIIPAGSSGGGGSGGANSGANSNNNNNSGGGGGGGGGGSGGGSGGSGGSGGGGSGGGSGPGGSGTTGGGVSGGSSSGGGVGGGGAGASSSAPGGYVAVPMPGGLRYIHPYPPTSVSTPAVAAVVTTASSQAVPVPVPVPAPASAPPPTHQAPTISQTPPPLTGTTAYAARDTYRAGTTNVNERIAINVSSSPLSQVGVGVPVGGVVGAGVSAEYTVSGGIAGGMGGGSGRDRPRISLLPPASITPTPSPTAPDYQHVSAARNPRIGLMPVQPDQYCSRTAATIVMAGDLQDTPPFKKIRLGQPPQLVQQLQSQPQSRCQSLSPADPACGSKQEQQQHVVQLQQPLRIDTREQPAVGAYTPQTEAISPTLPEPNTQEDVNYRSTKDDLLQQIAKVDREIAKRESQISKLRKKLKELEEAANKPLEASGLKRQVEEQSQQPKHQSLAQKIYAENRRKAEEAHKLLERLGPKVELPLYNQPSDTSVYQENRTRHQTCMRARLISRLRREHSERTSLHRQQSQTYAILVQEWHRKVERLEAAQKRKSKEAKNREFFEKVFPELRKQREDKERFNRVGARIKSEADLEEIMDGLQEQEEETLQDLKNSIKACQMEDKKMRSYAVIPPLLLDTKQRRIAFQNRNGLLQPEELEALHSERKLINVWSSVEHELFKEKYLQHPKNFGAIAQSLEHKSAPDCVHHYYLTKKAENYKQLLRKSRQRTRSSRNNPNNKVNNTSSTIGPIDILTTGVTTRLQREQQQKTQENPQSNSTTTTSTTTTNTTSATSGVSSATVVTTTTTTTTTTTTSLSSITSGVSLTTDSVTASMTTTSVLNTIATSSTSATPTTSGSKDSREAGKDGKVDSKESHPIKMEFGLIPQLDGLPGKDIKVIMEGKGPISSSSSALNTTNVSAIQPDFKDSSKKKPGCRDTGSCGTNVATGGRIKDKKKENHATPMETSDEEAPTIDVIESGRQIGPHACTVCQNVVEGNNHSRALPRSQASQYGLREDQVLPGARVCNTCRCKAVRGRYTACPLPGCPNLHNSSKARVKRLRALPSKWLDLPPEIREPIAQEFQIPNSATKCCSVCFSRISRRLAPHLAGGTETSDDVVDLMSRQWTDEELELLRKALREHGTNWLKVAEQIPGKTNHQCKNYYFANRKKLCLDQVVAEYYQSLGEERRPCLTDEEESGSSTSSCDELAVHDSSDTASAGSPANTMTGNASVVPGGSSTSSSLPMSFQRSTDQKLGEKLSDIAVVSLVPSVGSSHQSSSSAGTAAASSGAREDYDSSATETADEGQGGADLDNNSVVVTLTSASNTPLQQQGQQQHQQQQQQQQQQQQQQQQQQPQQPPPVVHSPPSTTSNSNPLTVKDLMLGVIEMQLKRPMVNSPADSGSSGPNSSGTPTITSILKADVHRHEITFVRGYKPPSSMTNTSLSNRDSNLATLSVVSGPHHGHRSAPSPKLAQMQATITPCPPTAPSSQTSSSSSDIFPKEGLVVMQVQQALRETEGTLDLSIKKPRQQQDYNHSLQNLHKPPTGTLYRQEPPSAAYYHSHGPHPEQGRGAKSPLVYASSPRPQAAAISTKMNKVSVPPPPPPPPHPKLSPKLGTPGHKGGSITHGTPVSTARYEGLLRQMTPPGGNPTTVSVATTGGGVVNASAGGQKETGSITQGTPVHPFAVDKRGAPMYDYHRAIRHSPVTGGGGSVPAGQAGGQPASAAVVVSHGGAGQYNSYSGRPPPSYTMEQLSSRQIIMNDYITSQQMHARARGGGTAAGAGETAAGKSNEQPPPPPPPPSTLYYASTPPPPPPQTHTQPRQGVIQRHNPQKQLHYQPPPGLEAFSSLVDVAVQQPSLPVPHPHGPHPAASAGGGGHEGLGKTMADRLLADHYVDNNRAFREQEMQRLQEHRMAMQAEHRMQAAAVAHHHQQRDRERERDLAHLREKEEHRLHREKEMQQQFVEHRLVVQQREKEIQQQEQHAQRLAQQQREKDMQHVVEHRLPMQREKEMQQHEQQHRMTVHQQQREKELRHQMVVAAQREKEHQEHRLIVQQQHREKEIQQQEQRLAIHQQQREKDIQQRERDLQHLQQIQQQQMQQQQIQQHMQQQRMEAERRHMAHQIYRDQQQLDRDSSRLLNSGFSQQSSRLQQQSQQHQQQSSSRQSQSSSGQQQNDSSSTLTAASLIDAIITHQINQSVENSGGSGSSANQPTRAGDRLFQGFHREAAQESNGIAHSPAGDGVGGGASGNGSGGNKAITLGEHVEHIVSKDFCPPHSSYRPYTGYQIPEDQWKRRKMNEPDSVKTGDERQIIRVAQQQQQQQQHQSASSSVGKQQFQHSVEPVSPPEATSNHYGRRFYESTTATSTSGTPSNKPHLSPLDYVKNKIVEVMRTSEDDKAAAGSGTAVSSDRNGGGGGVSDKTADEKVAVANAERRSPSVVGGTTGGEMVVDEATTPQPPPAPAAAPTNFYPFSALGVHTGPPPAPPPTATSTVSATVTKSEQMQPEPAPLLSAQYEPLSDED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01087133;
90% Identity
-
80% Identity
-