Dqua003313.1
Basic Information
- Insect
- Dinoponera quadriceps
- Gene Symbol
- bab1
- Assembly
- GCA_001313825.1
- Location
- NW:30596-45380[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 7.2e-12 6.7e-09 34.6 0.0 2 43 342 383 341 385 0.94
Sequence Information
- Coding Sequence
- ATGGACGCCTCTCAACAATATTGTCTACGCTGGAACAACCACCGCACAAATCTCCTCAGTGTGTTCGACGAGTTGTTGCACAACGAAGCGTTCACCGATGTTACCATCGCCGCAGAAGGTGGCACTATCAAGTGCCACAAAGTGGTTCTGGTCGCTTGCTCGCCTTACTTCCAAAGCCTGTTTTCCGATCTTCAATGCAGCCATCCGATCGTGGTGCTGAAGGACGTCAAGCTGTCGGAAATCAAAGCGATCTTGGAGTACATGTATCGCGGTGAGGTGAACGTAGCGCAGGATCAGTTAGGTAGCCTGCTGAAGATAGCGGAAGTGCTGAAGGTGAAAGGTCTGGTGGAGGAGAACGCCGGTGGGTCGCAGGCTCGCGAGGAAGCGGTCACGACGATGTCACCGCCGCCCGCCATCAGCACCAGCACTGGAGGCGCGCCACACAACGCCCACTCGTCACCGCCGCACTCCACCGATAGTTCCTACAGCGGTTTCTACAGCGTTAAATCGATCGAGCGGAGCCAGGGTCGGCTCGGGACGATGACATGGCCCGGGATACCGATTTTCTCCGCGTCCAATACGTACCCGCTGCATCTCGCCGGCCATGAGAGCAGCACCGGCGGCGACATCGGCTTCAAGTCGATGCCGCTGACCAAGCGCAAGCGGAACGACGTTACACCGATACATCAGGCGGCGTGTTCGTTGTCGACAAACCGTGACACGCCGATCTTGCGTACGGTGCTCCGTCAGGGTCAGGCTCACGTAGACAGCTCGCACGTCGACAACCACCATGAAGGATCGCAGTTCTGCACGAACAACACCAGCTCGACGAGCGAGGACAAGCATGGCATCGCCGATCTCATTCATGCGGAGACAGCGCACAGCCCCTACGTGGACGCGCCCGCGATGGAGGAAGACGAGAAGCAACGGATATCGCCGCAGTCGTATGCCGGCGACAGTAAGTCGAATATCGTGAATTTCACGCAGCAGAGACCGGAGTGGAAACGGTACAAGCAGTATTCCCGGGAGGACATTATGCGGGCGATCGAAGCGGTCAAGTCGGGCATCAGCCCTGTCCAAGCGGCGCGCACCCACGGCGTACCGTCGCGTACGCTCTACGACAAGGTGAAGAAGCTCGGCATCAGCACGCCACGGCCGTTCAAGCGTGCGCCAAACGGCAGCAGCACTTGCTACTCCTACGGCATTGGCGGTAACGCGAAAGGGAGCATCTACAGTGGTAGTTTAACCGAGATCGACAACGAAAGCCGCGATATCAATAGCGCGGGCACGCAGGAGACATCCTTCGAGACCGCCAAGGTTAAGGATGCGTCGCAGGACCTCGGCGACTCCGCGACACCATTAGACACCGCGGTACCGCGGTGCACCCCGAGCCCGGTCATACGCTGCGTCAAACAGGAGTTGAAAGTGGAAGATGAAGTGGAAGATTTGTCCGTGAATCGCAAGTCTGATGTTCCAGTGATAATGCCGCCTACCACGTCGGGTGTAGCCAATGAAGAATCGCAGGACGTGGCTATATCGAACGATCGTCAGGACTATAATTGA
- Protein Sequence
- MDASQQYCLRWNNHRTNLLSVFDELLHNEAFTDVTIAAEGGTIKCHKVVLVACSPYFQSLFSDLQCSHPIVVLKDVKLSEIKAILEYMYRGEVNVAQDQLGSLLKIAEVLKVKGLVEENAGGSQAREEAVTTMSPPPAISTSTGGAPHNAHSSPPHSTDSSYSGFYSVKSIERSQGRLGTMTWPGIPIFSASNTYPLHLAGHESSTGGDIGFKSMPLTKRKRNDVTPIHQAACSLSTNRDTPILRTVLRQGQAHVDSSHVDNHHEGSQFCTNNTSSTSEDKHGIADLIHAETAHSPYVDAPAMEEDEKQRISPQSYAGDSKSNIVNFTQQRPEWKRYKQYSREDIMRAIEAVKSGISPVQAARTHGVPSRTLYDKVKKLGISTPRPFKRAPNGSSTCYSYGIGGNAKGSIYSGSLTEIDNESRDINSAGTQETSFETAKVKDASQDLGDSATPLDTAVPRCTPSPVIRCVKQELKVEDEVEDLSVNRKSDVPVIMPPTTSGVANEESQDVAISNDRQDYN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00452666;
- 90% Identity
- iTF_00452666;
- 80% Identity
- iTF_00452666;