Basic Information

Gene Symbol
Arid4b
Assembly
GCA_001313825.1
Location
NW:733602-744252[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.8e-28 2.7e-25 87.8 0.1 1 89 307 394 307 394 0.95
2 2 7 1e+04 -4.4 1.4 3 18 1653 1668 1645 1678 0.54

Sequence Information

Coding Sequence
ATGCTGGGAGACGATCCACCGTACCTATCGGTGGGCACAGAAGTAAGCGCTAAATACAAGGGTGCCTTCTGCGAAGCTAAAATCCGTAAGGTGGTGCGATCGGTAAAGTGTCGTGTGACATATAAACAAGGTTTGGGCACTGCTACGGTCGCCGACGACCAAATAAAAGGGACTTTAAGAGTAGGTGCCTCTGTTGAAGCTAGGCATGGAGATCGGAAAGAATTTGTGGAGGCGACTATTACCAAAATCCAAGACTGCAGTCAGTATACTGTAGTCTTCGACGATGGCGATATCACGACGTTGAGGCGAACCGCGCTGTGTCTCAAAAGTGGACGACACTTCGCCGAGAGCGAAACGTTGGACCAGTTACCGCTCACCCATCCTGAACACTTTAGCACCCCTGTGATCGGGGGTAGAAGGGGTAGACGTTCAAGGCAAGCGCAGGACGAGAGCAGCGAAGATGAGGACAGTCCGCCGAGGAACGCCCGCGACTCCGGCTTCATCGGAGGCGCGAAGGAGGGAATGGAAACGGAGCCGGAGATCGGCAGAGTGGTCTGCGTGGAGCTCGGtgacaagaagaagaaggacaATTGGTTCCCGGGGCTAGTGGTCGCGCCCACCGCCCAGGACACTGTGAGGATACGCGTGAGGGACGATTACTTGGTGCGCTCGTTCAAGGACGCGAGATATTACACGGTACCGAAGAAGGAGGCCACAGAATTCACGAAGGAACTGGTCAACAAAGTGGAGAACAGCACGTTGAAGGTCGCAGTCGAGAAGGCGCTTCTATTTTTGGAGAAAAATGAATTGCCGCCTCATTGGGACAGGGATTCCTTGTTCGGCCATTCTGTTTCTAGCGGGAATAGCGATTCCGACGGCGAGCTCGACTCCGATAGCTCGGACGATGAgccgcgcgaggaaaaagatCATTTCGTGGCGCAGTTGTACAAATTTATGGACGACCGTGGTACGCCTATAAACAACTGTCCGATGATTGGTTCGGAAGATATCGATCTGTACAGGCTGTTTCGAGCGGTTTACAAGCTGGGCGGTTACAATCGCGTCACGAATCAGAATCAATGGAAGGCCATAACGCGGCGGCTCGGCTTCGCGATGCAGAACTCGCCTTCCACGCATAATCTCGTGAAGCAGGCGTACAAGAAATTCCTGCACTCCTTCGAGGACTTCTATCGGAAGTTGGGCTGTACCATGGTGAATCATCCGCGCGGCAGCACGCGTAAACAACGACCCGGAAGGAGCTTGATTCGCGACAAGGACAGAAACACACCGATACCGCCGCCGGTGCCGCCGGTGAAGAACGACAAAGAGGAAGACGAGAAGAAGGCTGCGGAGgacgagaagaaggagaagaaagaagtgaAGAAGGATCaggtgaaggaggaggagatcgTCAAgataaagaagaaggaagaggcgGAGGGCAGCGGCAGCGGCCAAGAGAGCGATGTGAACGTAGAGGCTGAGaccgagtcgtcgtcgtcgagtgcTGGGGAGAAGCCGCCGAAGGTGGCCGCGCCGGTGGTCCCAGCGTTACCCCCCAGCACGAACGCGTCGTCCAGCCGAGCCAAGCCGAAGAGCAGCAAAgaggagacgaagaagaagacggtcgagaagaagaagaccgaGAGCAAGAAGCAGGAGAAGAAGGATGAAAAGCCGAAGGAAGAGGAAGCCACCAAGACGACGAGGTCGAAGGCGAAGGACGACACCGTGAAGAACAAGAGCGCCACCGAAGGCAGGGAGACCCGAACTCCGTCCAGGGAAGCCGAGAAGAAAACGTTATCCAAGCAGCGACGTTTGACCGACGAGGAGCTGAAGAAACGCGGGAGGAAGCGGAAAGAGTACGAAACGGAGAAGTCGCGTGCGGACGAGCAACTCACGGAGACCACCGCACCCAGCTACAAGGGCCCCGTCGACTTCGGCGATCGACTGAAGGTCTACTACGGGCCGACGCACGAGTCCAAAGTCACGTACGAGGCGAAGGTGATCGACATAGAGAAGGACGGCGCGGAGCCGATGTATCTCGTGCATTACACCGGCTGGAACACCAGATACGACGAATGGATCAAGGCGTCCAGAATCGCGCAGAACTTCACGCAGACTCAAGGTAGGGTGAAGCGTACCAAGACACCCCGGCCGCAGACTCCCAGCGCGAATCTGCCGGCGAACAATAAATCAGCAAAGGGCACTTGCAGCTCGACGACCAACGTGTCTCAGAGTCGTCGCCGGGCTCAGAGCGTCGCCCCTCCCACGTCCACCAGCGCCGCCGTGTCCGTCACGTCCGCGAAGGAGGTAAAAAAGGACGAGAAGGACAAGGAGGCGACACCGCAACCGATCCGAGCCAGCACGCCGTTGTCCATCGCCAGTTCCAGTTCCAGAACCAAGAGCCCCGCCACACCGGCGAACAACCGGCAGACCAGGACGAGCAGGAACACCGAGCTGTCGGGCACCATTGAGCATCGCAGGCGCACCAGACGAATGTCGGGCCACACAGACATATCCGTAGTGTCGGAGAGCGAAGGTAGCGACGGCTACGATTCCGACACCACCGAACCCGAGCAGGCCAAGACCAGGTTGAGAGGCGCGGAGGAAAGAAAGCGGAAGGAGGCGCGGAACAGGGTGGAGGAGAGGATAAAGGTGGAGGATGCCAGCGACGCCGAGGACGAGAAGGACAATCTCGAGGAGCCGCGTAAGGGCAGACGTCTGAGGAGGACACCCGGCAAGATTCAGGGCATCAAGTCCGAGCCCGACAGCGACGAGGAGCAACCCAAGGGCCGCGACTTCGACCTCAACCAGATACGATCGGAGCTGAAAGGTTTCGACAAAGCGGTGAAGATGGAGCTGGTCAGGATGGAGCCGGACGATGAGATGAAGATggacgagaaggagaacgtcgcgacgatcgcCACTCGAGTGTCGCCCAAGTTGGAGAAGCTCGTCGAGACCCCGAAGGTGGAAGTTGTCGAGACGAAAGTCGAAAGCACGGAAGACATTTACGAGTTCAAGGAGCCGGAGCCGTTCGAGTTCGAGGTGAGGAACAAGAGAGACACCAGCGGCGAGAAGGACAAGCTGAAGAAGAAGATGTTCGAGGACGAGCCCAAGAGCccgaagaagaagcagaaaATCGCGCCGATGTCCACGACGCCAGCCAGGGAGGCGAAGAATAATGACTCGACGGACGGCGACGGTCGGGCGAAGAAGCCGAGGAAGTTGTTCAGCAACAAGAGATCGGACGAAGCAGCGAGCGAAGCGCCGCCGGTGGTCACGGTGGTTCCCCAGTCGCTCAGCAAGTCGTCGGCTCAGCCGGCGCCGCCGTCCGTGTACGAGGACGCGTTCGACAAGCTGTGCGAGTCCCCGTCGTTCAATCAACAACTGAAGCCGGCGGCGATCGTGGAGGAACCGCCTAAGGTCGCGTCCAGCGGCTTGAACCTCCTGTTCAGCGACCTGCCGGCGGCGGACGACGAAGGTACGCGCGACGACTCGGAGGACCGTCTGATCATATCGGAAACCGAGGTATCGGAGGTGGAACAGGACAACTCCTTCTCGTATCAGCAGGAGGTCCAGTTTCACGGCGCCGAGCTGCCGGACGCGACGGACTCGGGCAACAAGAGCGAACcgaccgtcgccgccgcggttGAGTGCGCGAGGGAGGAGACGATGACGGGCGCCGGCAGTAGCGCCAACAAGTCGATCGGCAACAATTCCCTGGATCAGAAGCAGAACGTCGTCAAGTTGCCCGCGCAGTCGGAGCTGAGGCTTCTGGACACGAAACTGCTCGATCTCGCTCCGGTCGCTCCGTTGCCGATCGTGACGCCTCCGGCGCCGATAAGCGCGAGGTTGCCGGCGACCTCCACGATCGAGGAGAAGCTCTCGGCGGCCGCGATGGCGTTTCGCAACAAGGCCAAAGATAACAAGAGAGACAGCAAGGCGACCCTGGACGAGGATGTCACGGCCGACGTGACGACGCGCAAACTGTTGAAGCTGGACATTACGATTCTTCAGAGAACCAAGGACGACGAGATGGACGAACAGGAGAAGAAGCAGGAGGAGGCCGCGATGATGAGCGAAGAAGAGCAGCGCAGGGAGATCATGCGCGTCGCGATCAAgcagaaggaggaggagcTGCAGCAGCTCAAGCTGAAGAAGGAGGCGGAATTGAAGAAGTTCGCGGAGGCGAAGACCATCGTCGCCGCCGAGCACAAGACGAAGTTGCAGGAAGTCGGCAGGGAGGACGGTTGGAAGAGCGCGGAGAACGAGCAAGGCAAGCGACCCGAGGAGGAGATGCTCGAgcagacggagaaagagagaatcgatACCCGCAAGAAGCCGGTGAACCCGGACATCCTCGATTCGACGGACAGCAGCGATTCGGAACAGAGGCTGGTGATCGACAACGAGGAGCCGCAGGACGTGAAGATGTCGGTCTCGTCCAACTTCGACGTCAAGCTGCGAGCGGAACTCGATCGTCTGCAGGACACGCAAGAGAGATACGCGAGGACGCAGAAGACCTCGAACGTTCAACATCAGctgcaacaacaacagcaagAATGCATGGAGGTCAAAGCGTCGTCCGACGTAGTGTCATCCGTCTCGAAGACCGACGAAGAGGGTGAGACGATGAATTCCCTGCTGTGCGAAGAAGAGATACCCGGCTCACCGGCTCCGCCGGGCTCCGAGAGCATCGAGCAGGCGAGTGCCGATCCCGCGTGCAACTCGCCGAAGAACGAGGTCACCGAGAGCAGCATAGTGCTGATGGAGATGCCGTTCGCGAGTGCGCCCACTTCTGGCCAGAGCACCAcgtgcagcagcagcaccgtCGCCACTCTCAGCATGTCGTTACCGAAAACCGTCGAGACTTCCGTGCCGGTTTCCTTGCCGATGCAGCAGAACGCACCGTTGAACGTACGACAGCAGCAGCATCAGCAGCAGCACCAACAACAGCTCCAGCAGCAACTacagcaccaccaccaccaccagcagcagcagcaacatcAGCAGCACATGCCAGCGGTGTTACTGCCGCCGCAACGGCGGGAGAGCAACGAGGCCGCACCGGTGATGGACAATACGCCGCCGACCACCCCCGATTCGAGCATCTCCAACATCACCGGCTCGCCGAGGGAGGAGAGGACCGGCGGCTCGTCGCCAACCTCCGAAGACAACATCAAGCTGAACCGCGACAGCTCAGAGGCGGACAACGACAGCGCCGGCAAAGGGCCGGGCTTCAGCGAGGACGACACGCTGCCGATCTCGGAGAGCAATTCCGTCGATAGAACGCCCAAGCCGCCGGCTAAGCGTTCGATCTGCGACGAAATGCATTCGTCACCCAAGAAACGCAAGAGGAGCCGAAAGCACTCGGAGTGCGGTAGCGTGGTGGCGCCGAAGAAACCCGCCGGCAGGCAGAGTAGCAGCAGACACGGCAGATACGTCGCGGGCAGTGATAGTGACGATACCAGTGAGGGGTCGAATCTGTGCACCGTCAACACCGCGCCGACCGCGCACGCCAATCTCGCCAGCGTCACCGATCTGGCCGCTACCTATTCGTCGAGGTCACCGAGGCCGACCAAGTATAACTTCTACGTGGAACTGGATCCTGAATTAGACGCCAGTCAGAGGATAGCAGTGTTACAACAGAAGTTAACCGAGTTGCGGAAGACGTATAACGCTGTGAAAGTTGAACTTGCCACGATAGAGCGGCGTCGGAAAAAATTACGAAGACGGGAACGAGAAGCGGTCAAAGCAGCTAAGGCAGAGATGCAACAAGCTTGCTCGTGA
Protein Sequence
MLGDDPPYLSVGTEVSAKYKGAFCEAKIRKVVRSVKCRVTYKQGLGTATVADDQIKGTLRVGASVEARHGDRKEFVEATITKIQDCSQYTVVFDDGDITTLRRTALCLKSGRHFAESETLDQLPLTHPEHFSTPVIGGRRGRRSRQAQDESSEDEDSPPRNARDSGFIGGAKEGMETEPEIGRVVCVELGDKKKKDNWFPGLVVAPTAQDTVRIRVRDDYLVRSFKDARYYTVPKKEATEFTKELVNKVENSTLKVAVEKALLFLEKNELPPHWDRDSLFGHSVSSGNSDSDGELDSDSSDDEPREEKDHFVAQLYKFMDDRGTPINNCPMIGSEDIDLYRLFRAVYKLGGYNRVTNQNQWKAITRRLGFAMQNSPSTHNLVKQAYKKFLHSFEDFYRKLGCTMVNHPRGSTRKQRPGRSLIRDKDRNTPIPPPVPPVKNDKEEDEKKAAEDEKKEKKEVKKDQVKEEEIVKIKKKEEAEGSGSGQESDVNVEAETESSSSSAGEKPPKVAAPVVPALPPSTNASSSRAKPKSSKEETKKKTVEKKKTESKKQEKKDEKPKEEEATKTTRSKAKDDTVKNKSATEGRETRTPSREAEKKTLSKQRRLTDEELKKRGRKRKEYETEKSRADEQLTETTAPSYKGPVDFGDRLKVYYGPTHESKVTYEAKVIDIEKDGAEPMYLVHYTGWNTRYDEWIKASRIAQNFTQTQGRVKRTKTPRPQTPSANLPANNKSAKGTCSSTTNVSQSRRRAQSVAPPTSTSAAVSVTSAKEVKKDEKDKEATPQPIRASTPLSIASSSSRTKSPATPANNRQTRTSRNTELSGTIEHRRRTRRMSGHTDISVVSESEGSDGYDSDTTEPEQAKTRLRGAEERKRKEARNRVEERIKVEDASDAEDEKDNLEEPRKGRRLRRTPGKIQGIKSEPDSDEEQPKGRDFDLNQIRSELKGFDKAVKMELVRMEPDDEMKMDEKENVATIATRVSPKLEKLVETPKVEVVETKVESTEDIYEFKEPEPFEFEVRNKRDTSGEKDKLKKKMFEDEPKSPKKKQKIAPMSTTPAREAKNNDSTDGDGRAKKPRKLFSNKRSDEAASEAPPVVTVVPQSLSKSSAQPAPPSVYEDAFDKLCESPSFNQQLKPAAIVEEPPKVASSGLNLLFSDLPAADDEGTRDDSEDRLIISETEVSEVEQDNSFSYQQEVQFHGAELPDATDSGNKSEPTVAAAVECAREETMTGAGSSANKSIGNNSLDQKQNVVKLPAQSELRLLDTKLLDLAPVAPLPIVTPPAPISARLPATSTIEEKLSAAAMAFRNKAKDNKRDSKATLDEDVTADVTTRKLLKLDITILQRTKDDEMDEQEKKQEEAAMMSEEEQRREIMRVAIKQKEEELQQLKLKKEAELKKFAEAKTIVAAEHKTKLQEVGREDGWKSAENEQGKRPEEEMLEQTEKERIDTRKKPVNPDILDSTDSSDSEQRLVIDNEEPQDVKMSVSSNFDVKLRAELDRLQDTQERYARTQKTSNVQHQLQQQQQECMEVKASSDVVSSVSKTDEEGETMNSLLCEEEIPGSPAPPGSESIEQASADPACNSPKNEVTESSIVLMEMPFASAPTSGQSTTCSSSTVATLSMSLPKTVETSVPVSLPMQQNAPLNVRQQQHQQQHQQQLQQQLQHHHHHQQQQQHQQHMPAVLLPPQRRESNEAAPVMDNTPPTTPDSSISNITGSPREERTGGSSPTSEDNIKLNRDSSEADNDSAGKGPGFSEDDTLPISESNSVDRTPKPPAKRSICDEMHSSPKKRKRSRKHSECGSVVAPKKPAGRQSSSRHGRYVAGSDSDDTSEGSNLCTVNTAPTAHANLASVTDLAATYSSRSPRPTKYNFYVELDPELDASQRIAVLQQKLTELRKTYNAVKVELATIERRRKKLRRREREAVKAAKAEMQQACS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-