Basic Information

Gene Symbol
gata4_2
Assembly
GCA_963920625.1
Location
OY987189.1:1561116-1591334[+]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 9.3e-18 2.3e-14 52.4 3.2 1 34 745 777 745 779 0.97
2 2 3.8e-16 9.3e-13 47.3 5.4 1 34 799 831 799 833 0.97

Sequence Information

Coding Sequence
ATGATACAGTCTGAAGAGACTAAACCAAAAATTACTTATACTCATTATCCAGGTCAGATTATGTGCCGATttaaTTTACCGGGGTATCatgtgaatgatgaaaatatcgaTGAGCCTGAAACTACaagtgataatataaatgttaatacTGACATTGACAATTCTCTGtctgatattaaaattgaaaataatccaGAGCAAAATGATGAGAGAACGACAACGATAATAACAAAGAtaataacaaaagaaatacCAACGTCAACAATATCagaaatatcaacaataatagcaccgacaacaacaacgacgacatcatcatcatcaacaacgacaacaacaacaacaacaacagaagcagcagcagcagcagcaacaccAATAACAACAGCAGAAACGTTAAATCATCAAgatcaacagcaacagcacAAGCACGAGTTAAGTTACATTGAGGATGGCGGGGATAGTGTGGGCGTGCTGGAGGCGGTCCGACCGGAAATTGAAAATGGCGTCTTGGTTGAAGCGAGTGTGAGTGAACCCGTTGCTGTACCATTTGTCCTAACTGAACCTGAAGACACTGGCACATATACACTACATCATACCCTTGGTTATCATCCATCGCATCAAATATTTCACGAAagGGATTACTTACAAACGGCTTCGCCAGTGTACGCTGAGGGCGGTAACACTAGGGAGGCGGATGATAATCATCAGCAACAGGTCACACTtgagcaacagcaacagcagcagcagcaccaccaccatcatcaccaacaTCCTCAACATCAATCGCACCACCAATACGCGCAGCAACTCGGAGGGGCAACTGAGGTGGTGGTTCTCGAGGGTGGGGATAGTCGCCATCCGTCTGAGGCCTCGCACCCGACCGAGGGAAATCTAGTGAACAGTCACATGCCACACTCTGCAATGATTCGGTACAACACTGAAACGCTTTCACCGTCTACAGaccaacatcatcatcaccaccatcatcatcaacatcatattcaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacaacagcaacagcaacactTGAGTGATCCACAGCAAGAACAATTGCACCGTTTGGATgaacaaaatcatcatcaagATACAGTAGAACGTGTTAATGGTATTGTAGCAGCCATGCGTGGAGCACGAAGTGATTATACATTGGGTGTTTTATTTCCAAATTTGGCTATTGCCAATACAAATGCCAATGTAACGGGTGACAATACCGGTGGACATCATTTAGAAGATGTTTTACGAGAAGATACATTTATACAACAGCATATTAGAGCAGCAAGTgttggtggtagtggtggtagtggtactggtagtggtggtggtgctggTGGCGGTGTATCACCACCGGTAAGAACTGGCAGTTCACCAAGTTCAAGTCGTAGTCCAAATAATGAGCATGATATTAATTCACCGTCTCATCGTCATCAAACAAATGATGGGGGTGGTGGTTATAGTCCAAGTGATCAGGGACGTTTGCAAAATTTTACACATTTAACTGCAATGCAACCACCAACAAATTCAGTACAAAATAGCGGGCATGGGCTTGGACAACAGGACACTGATCGCGTTTCTGATTTGTATATggtatcaatttataatcatcattCAGCTGGTACACCGCATCATCATCCGGACCACGAACAACAACCTCCAACGTCGCATTCACCCTCTGGTTCACTCACAAATTCGTCATTGTATCGTCCATTGAGTGGTATTGGTTCAGTGGGTGGAAGTGGCGGAGGTACAAACGCCAGTGCTTATGGATTACCGTATATGAGTCACAGTCCAACAGATCTCACTGGATCCCAACAATTTTGGAATCAAgAATCGGCACTGACACCAATTACCGAAGATTTCAATTCGAAATCAACGGGACCGGTGACTCATCAGAGTTTACCGGCATTTTCTCAACCATTTGGCAGTGGTCGATCGAGTTTTCGAGGTTACAGTCCACCGTATCCATCTCAACAACAAACGACAACAGGCCCAACTGTAAATGCCACAGGCGATGTTCCTACCTGGCCTTATCCAACATCAGCTGCTGATACGCTTCCATCACCATACGCAACTCTACCACCGTCAACCCGACGACAAAATTCAAATGCAACGACTCACACACAATTGACTACACCAGCGAGTCTTTCAAGCATGTACAACATCGAGGCCGAATGCTTTACGGAGGGTCGCGAGTGCGTGAACTGTGGGGCGATATCGACCCCCCTATGGCGACGAGACGGCACGGGACATTATCTCTGCAATGCCTGCGGCCTCTACCACAAGATGAACGGAATGAATCGTCCACTAGTCAAGCCAGCACGGCGATTGTCGGCATCAAGACGCGTTGGATTGTCCTGTAGCAATTGTCATTCACTGCAAACGTCATTATGGCGACGTAATTCATGTGGTGAGCCTGTATGTAATGCGTGTGgactttatttcaaattacatCATATCCATAGGCCACTGTCAATGAAAAAAGATACAATACAAACGCGCAAACGAAAACCAAAAGGTGGAATTAAATCAACTCCAGTACCACACAACGACGCCAATACCACATCaattaacaataacaataacaacaacagcaacaacaacaataataataataatcataataacaataatgccAATCACAATAACAACCATTTAAAAATGGAAACagataaTTATGGACATTTGCGTGGGACACATCCAAATGTTGTACAATCACCGTATGCTAATACATTGTACAGTGGAAGTTCACAGCCATCGAGAATCATGAATTATCCAACGCTAACGCAAAATGTTTACTATGAAATGATTGCAaatcaacatcaacagcagcaacaggaAATGATGGATTGTCAATCACCAAAGATGGAGTGTCCATCTCCACCAAATCGTGGCTCACCAGTTTATCAATCGGCAAATCATTCGCCAGATCATCATTTGACATCACCGCATATTGTCACACTTAGCAATTCATcgccaaataataatacaaataaattaatgctTGATAATGGTCATTTGGATACTGTTGATAGATAG
Protein Sequence
MIQSEETKPKITYTHYPGQIMCRFNLPGYHVNDENIDEPETTSDNINVNTDIDNSLSDIKIENNPEQNDERTTTIITKIITKEIPTSTISEISTIIAPTTTTTTSSSSTTTTTTTTTEAAAAAATPITTAETLNHQDQQQQHKHELSYIEDGGDSVGVLEAVRPEIENGVLVEASVSEPVAVPFVLTEPEDTGTYTLHHTLGYHPSHQIFHERDYLQTASPVYAEGGNTREADDNHQQQVTLEQQQQQQQHHHHHHQHPQHQSHHQYAQQLGGATEVVVLEGGDSRHPSEASHPTEGNLVNSHMPHSAMIRYNTETLSPSTDQHHHHHHHHQHHIQQQQQQQQQQQQQQQQQQQQHLSDPQQEQLHRLDEQNHHQDTVERVNGIVAAMRGARSDYTLGVLFPNLAIANTNANVTGDNTGGHHLEDVLREDTFIQQHIRAASVGGSGGSGTGSGGGAGGGVSPPVRTGSSPSSSRSPNNEHDINSPSHRHQTNDGGGGYSPSDQGRLQNFTHLTAMQPPTNSVQNSGHGLGQQDTDRVSDLYMVSIYNHHSAGTPHHHPDHEQQPPTSHSPSGSLTNSSLYRPLSGIGSVGGSGGGTNASAYGLPYMSHSPTDLTGSQQFWNQESALTPITEDFNSKSTGPVTHQSLPAFSQPFGSGRSSFRGYSPPYPSQQQTTTGPTVNATGDVPTWPYPTSAADTLPSPYATLPPSTRRQNSNATTHTQLTTPASLSSMYNIEAECFTEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKPARRLSASRRVGLSCSNCHSLQTSLWRRNSCGEPVCNACGLYFKLHHIHRPLSMKKDTIQTRKRKPKGGIKSTPVPHNDANTTSINNNNNNNSNNNNNNNNHNNNNANHNNNHLKMETDNYGHLRGTHPNVVQSPYANTLYSGSSQPSRIMNYPTLTQNVYYEMIANQHQQQQQEMMDCQSPKMECPSPPNRGSPVYQSANHSPDHHLTSPHIVTLSNSSPNNNTNKLMLDNGHLDTVDR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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