Basic Information

Insect: Dinocampus coccinellae
Gene Symbol: L_1
Assembly: GCA_963920625.1
Location: OY987187.1:6789569-6795424[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 1.3e-05 0.00097 19.2 1.2 1 23 99 121 99 121 0.98

2 16 0.091 6.6 7.1 4.0 1 23 127 149 127 149 0.98

3 16 6.7e-07 4.8e-05 23.3 2.3 1 23 155 177 155 177 0.99

4 16 2.8e-05 0.002 18.2 0.9 1 23 183 205 183 205 0.98

5 16 2.6 1.9e+02 2.5 0.2 9 23 289 304 281 304 0.86

6 16 0.0027 0.2 11.9 1.8 1 23 359 382 359 382 0.94

7 16 0.36 26 5.2 0.2 2 23 393 415 392 415 0.88

8 16 0.55 40 4.7 0.1 3 23 478 498 477 498 0.97

9 16 0.11 8 6.9 0.9 2 23 511 532 510 532 0.94

10 16 0.0015 0.11 12.8 0.5 1 23 541 564 541 564 0.94

11 16 0.43 32 5.0 1.6 1 23 569 592 569 592 0.91

12 16 0.27 19 5.7 2.1 1 23 668 690 668 690 0.97

13 16 0.0023 0.17 12.2 1.6 1 23 695 718 695 718 0.95

14 16 9.7e-05 0.007 16.5 0.8 1 23 817 839 817 840 0.95

15 16 0.002 0.15 12.3 0.8 2 23 850 872 849 872 0.92

16 16 0.0042 0.31 11.3 7.0 1 23 1091 1113 1091 1114 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	1.3e-05	0.00097	19.2	1.2	1	23	99	121	99	121	0.98
2	16	0.091	6.6	7.1	4.0	1	23	127	149	127	149	0.98
3	16	6.7e-07	4.8e-05	23.3	2.3	1	23	155	177	155	177	0.99
4	16	2.8e-05	0.002	18.2	0.9	1	23	183	205	183	205	0.98
5	16	2.6	1.9e+02	2.5	0.2	9	23	289	304	281	304	0.86
6	16	0.0027	0.2	11.9	1.8	1	23	359	382	359	382	0.94
7	16	0.36	26	5.2	0.2	2	23	393	415	392	415	0.88
8	16	0.55	40	4.7	0.1	3	23	478	498	477	498	0.97
9	16	0.11	8	6.9	0.9	2	23	511	532	510	532	0.94
10	16	0.0015	0.11	12.8	0.5	1	23	541	564	541	564	0.94
11	16	0.43	32	5.0	1.6	1	23	569	592	569	592	0.91
12	16	0.27	19	5.7	2.1	1	23	668	690	668	690	0.97
13	16	0.0023	0.17	12.2	1.6	1	23	695	718	695	718	0.95
14	16	9.7e-05	0.007	16.5	0.8	1	23	817	839	817	840	0.95
15	16	0.002	0.15	12.3	0.8	2	23	850	872	849	872	0.92
16	16	0.0042	0.31	11.3	7.0	1	23	1091	1113	1091	1114	0.95

Sequence Information

Coding Sequence: atgttattcaaGGGAAATAGTTCACGGTTAGAATTTCTTATTGAAAGAATTCAAGCACACAAAGAATCACCGTCACCACTTCTCGATGAAAAGTGTAACACACGATCAAAAGAAGGAACATTGGGTAATGGAAGTTTTTCATGGCGCAGTGAGGAAGACAGTCTGACATGTCAAAGAGGTGGTGGCACACCATCATCATGTACAACTTCGACATCAATGAGTTTTGCATCAGAACCAGATGTTGACATTGATACGTCACGTATGGGAATTGATTCGAATATTACATCAGGTCCTTATCCATGTCAATTTTGTGACAAATCATATCCAACATTGAGTTATTTGAAGAAACATGAGcagagtcACGGTGATCAAATGCCATATCGTTGCAATTGGTGTGCACGATTGTTTAAACACAAACGAAGTAGAGATcgtcatataaaattacacactGGAGATAAAAGATATCGTTGTACTCAATGTGAAGCGGCATTTTCACGaagtgaccatttgaaaattcatatgaaaacaCATGACAATCAGAAGCCATATCATTGTACTGAGTGTTCACGAGGTTACAGTACAGCAGCAGCATTAACATCACATATGCAATCACACAAGCGACCGCAATCATCGAATAATCAATATACAAAAGTTATTAATGAGGATTTACGTAGTGCATCATGGCCAAGTGGTGGTGCATCATCTCCAACAGTTGTGAATacatcattttcaaatttaccACTGTcgataatgcaaaaaaaaatttccacgaGTTATTCACCTGATGTAACAGCTAATGATCAAACAAACACTTCATTTATCAACTCATCATTGACATTGGCTTGTATGTATTGTGCTAAAGATACTTTTACGAATATGGAACAACTTCAACTTCACATTCAGGCAACACAtgagataatattgaatggtaAAAGTCCATCATGTTCACCACACATTACCACGGAttacataacaaaaaattttcgaaaaaattgcaatgagcttgaattaaaaaattctacatCAACTATCAATACTCAAATAAGAAATGAATCAGTGGCTAATAATGAATCATTTGCATGTAGACATTGttcaatgaaatttacaaaattaattttactccGTAATCACATGATGGATATACATCGTGATGATTATTCTACCGAGCCCAAATTAACTTGTCCATTTTGTggtattatttgtaattcaaCTGCGTCATACGCTGAACATTATGTTCTTGAACATTGTGATAATCCAaagaattcaattaaaaaacaagaatatacTTTAACTACTGCAGTTACATCGTATCAGGAGAATAAAATATGCAAATTACAAAATCAAAATGCTAACAGTGGtcaaataaaagaatatagtACAGAATCTTTACAGACAAATAATccagaaaattattcatcaagtACATTACTCTGTGGACAATGTGGTGCTGCATTGGAGAACTTTGAATTATTTCGAACTCATTTGGCAATGCATCTTCAagcaaataatcaattaaaattaaatggaatTCATTGTCCAAAGTGTGATTTGACTTTTCAAGCGTATAATGATATGATTAGTCATTTAACAAAACATTATCTTGGACAACCAATGAAACAATATTCATGTGATGcttgtgataaatattattacgatTCAGAATCACTCAAGCAACATCTCCTTGAATCACACgctcatcatttatataaatgtactctATGCCATGATACGTTTGACACGAGTGTTGCCATTCAATTGCATTTTACTGTGAAGCACATACACGAGTGTAATGTATATCAATGCAGTGGCTGCAGTATAAATTCAAGAGGTGAAGAAGAGTCTCACGAGAGTACATCAGAGATGAGTGGTAGTGTCTTTAAAAGTACTACAGAAATGATGAAGCATGTTGCGAATATACATGTACCAAAGAAATTACACGTAAATGAACTTTCATCACCGGGAAATGCTGTATCGACTCCCGCTGGTGTCATTGGTGAATTATTTCGTTGCTGTTTTTGCGGTATTTATTGCGTCTCTGATGTCGATTTACAATTACATCTTGCCAGTCATTCTACCTGTCTCTATCGATGTCCAGTTTGTCGTGAGGGTTTTAccgttgaatttttattggaaaaacATATTGCCCATTGTCATAGTTCTATCAATAATGATACAATGgagagtaaaaaattatactgttCATCAGAACAAGATGACaaggtaCGAAATAAAAGACGACGTTCAccaaatgtgaataataatttgaatcatGTGGATAATGTAAAACGTCCAATTCGCAATGccgttaataattattatcgttgtGAATATTGTGAGAAAACGGATTTTTTAACTGATATTGAGTTACGCGCACACAGAAAACTCGTTCACAAAACAACAATGAATACAgtattgaatacaaaattgCAAACGAAAATTTTGTCACAATATATTTGTAGTTATTGCGGGGAAAGTTTGCGTACAAGATTAGAATTAGAAGCGCACACTCGGCTACATCATGCACCAAATGAAATGGGAAAACGCTGCAAATGCAATATATGCGATGAAGTATTTTCAAGTGGTGGTACATTGGCAGAACACAAATTACAAAaacattgtaaaataaaattgagtgatGTGTGTATTGTTTGTCGGGGtggattaaaaaatgaaaatgatttttttcatcacgtgCAAAAACACAGTTTAGAAACATTTGATCCACAATATCAACGGGGAAGTGATGGTAATTCAATGTCTCATATAACAGCACATTGTGTTGTCTGCAGACAAACATTAATTAGCGAATTGGAATGTCAACTTCATGCAAAATATCATCTaccaattaatataattaataatgacaatgataaaattcaatgttgcAGCATTTGTCTTCGTGAAATTAGTGATGACAAGAgtgcaattaatatattatccaAAAGTATAACAACTAGTGAACAACAATTAAAAGTTTGTCAATGTTGTTACACAAGACACTCACAGGGTCTACCAATTTTAGGTTCATCACCaagtaattttcaaaataattgtatggaaattggaataaatgatgatagagaaaaaaaaattcatagcgttacaaatataaatgaaattaataacgataaaaataatgaatgtacaATGAATTTGATTAAATGTGAAGATTATGATGATATTCATGATGGTAGTTGTGATGATGGTGAAAATATACcgttaaatttcaataatgatatggtaaatataaatatttctggCGTCCGTCCATATTGTTGCAATCATTGCACCCTCAAGTTCACCTTTAAAACTGAATTGGAGCGTCATGTTGCCATTCatcatgacaataataatgtcGAGGTAGCGTCGACCTCCATCACCactatcaccaccaccaccaccaccaccaccacctcctccATTCCTTTACCAACATCACAATTCAACATTCAACATGAAAAATTGGCAGGTCATTCGTTAACTCGGGAGAACAATAAATCGTTCAACAATGTCATTGTTAAAGAGGAGATTTTTGTTAATCCAGTGGAGAATgaggaggaagaagaagaaaataacaatgcagaaggagaagaagaagaagaagaagaagaagaagaggaagaggaagaggaagaggatgatgatgatgatgataatgttgatgaaCTCGATGAGAAAAATCCTGATGCGGATTCCGTGATAGCGAATGATATTAtggattga
Protein Sequence: MLFKGNSSRLEFLIERIQAHKESPSPLLDEKCNTRSKEGTLGNGSFSWRSEEDSLTCQRGGGTPSSCTTSTSMSFASEPDVDIDTSRMGIDSNITSGPYPCQFCDKSYPTLSYLKKHEQSHGDQMPYRCNWCARLFKHKRSRDRHIKLHTGDKRYRCTQCEAAFSRSDHLKIHMKTHDNQKPYHCTECSRGYSTAAALTSHMQSHKRPQSSNNQYTKVINEDLRSASWPSGGASSPTVVNTSFSNLPLSIMQKKISTSYSPDVTANDQTNTSFINSSLTLACMYCAKDTFTNMEQLQLHIQATHEIILNGKSPSCSPHITTDYITKNFRKNCNELELKNSTSTINTQIRNESVANNESFACRHCSMKFTKLILLRNHMMDIHRDDYSTEPKLTCPFCGIICNSTASYAEHYVLEHCDNPKNSIKKQEYTLTTAVTSYQENKICKLQNQNANSGQIKEYSTESLQTNNPENYSSSTLLCGQCGAALENFELFRTHLAMHLQANNQLKLNGIHCPKCDLTFQAYNDMISHLTKHYLGQPMKQYSCDACDKYYYDSESLKQHLLESHAHHLYKCTLCHDTFDTSVAIQLHFTVKHIHECNVYQCSGCSINSRGEEESHESTSEMSGSVFKSTTEMMKHVANIHVPKKLHVNELSSPGNAVSTPAGVIGELFRCCFCGIYCVSDVDLQLHLASHSTCLYRCPVCREGFTVEFLLEKHIAHCHSSINNDTMESKKLYCSSEQDDKVRNKRRRSPNVNNNLNHVDNVKRPIRNAVNNYYRCEYCEKTDFLTDIELRAHRKLVHKTTMNTVLNTKLQTKILSQYICSYCGESLRTRLELEAHTRLHHAPNEMGKRCKCNICDEVFSSGGTLAEHKLQKHCKIKLSDVCIVCRGGLKNENDFFHHVQKHSLETFDPQYQRGSDGNSMSHITAHCVVCRQTLISELECQLHAKYHLPINIINNDNDKIQCCSICLREISDDKSAINILSKSITTSEQQLKVCQCCYTRHSQGLPILGSSPSNFQNNCMEIGINDDREKKIHSVTNINEINNDKNNECTMNLIKCEDYDDIHDGSCDDGENIPLNFNNDMVNINISGVRPYCCNHCTLKFTFKTELERHVAIHHDNNNVEVASTSITTITTTTTTTTTSSIPLPTSQFNIQHEKLAGHSLTRENNKSFNNVIVKEEIFVNPVENEEEEEENNNAEGEEEEEEEEEEEEEEEEDDDDDDNVDELDEKNPDADSVIANDIMD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -