Basic Information

Insect: Dinocampus coccinellae
Gene Symbol: gtf3a_1
Assembly: GCA_963920625.1
Location: OY987185.1:4792195-4796781[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 7.2e-06 0.00052 20.0 0.4 1 23 744 766 744 766 0.97

2 17 0.086 6.3 7.2 0.2 1 19 772 790 772 793 0.92

3 17 0.56 41 4.6 1.3 2 23 799 820 798 820 0.95

4 17 7.7e-05 0.0056 16.8 1.2 3 23 829 850 828 850 0.98

5 17 0.0036 0.26 11.5 2.1 1 23 857 880 857 880 0.95

6 17 8.9e-05 0.0064 16.6 0.7 1 23 886 909 886 909 0.94

7 17 0.6 44 4.6 0.9 2 23 917 937 917 937 0.94

8 17 6.7e-07 4.9e-05 23.3 1.8 2 23 943 964 942 964 0.97

9 17 2.1e-06 0.00015 21.7 0.2 1 23 970 992 970 992 0.99

10 17 0.011 0.8 10.0 3.2 2 23 1004 1026 1003 1026 0.95

11 17 0.43 31 5.0 2.6 1 23 1032 1055 1032 1055 0.92

12 17 0.0015 0.11 12.7 2.6 2 23 1077 1099 1076 1099 0.95

13 17 0.00039 0.028 14.6 0.6 2 23 1106 1128 1105 1128 0.96

14 17 3.8e-05 0.0028 17.8 1.7 2 23 1136 1157 1135 1157 0.97

15 17 0.0011 0.082 13.1 2.3 1 23 1163 1186 1163 1186 0.96

16 17 0.3 22 5.5 3.2 2 23 1193 1214 1192 1214 0.96

17 17 0.22 16 5.9 2.0 1 23 1220 1242 1220 1242 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	7.2e-06	0.00052	20.0	0.4	1	23	744	766	744	766	0.97
2	17	0.086	6.3	7.2	0.2	1	19	772	790	772	793	0.92
3	17	0.56	41	4.6	1.3	2	23	799	820	798	820	0.95
4	17	7.7e-05	0.0056	16.8	1.2	3	23	829	850	828	850	0.98
5	17	0.0036	0.26	11.5	2.1	1	23	857	880	857	880	0.95
6	17	8.9e-05	0.0064	16.6	0.7	1	23	886	909	886	909	0.94
7	17	0.6	44	4.6	0.9	2	23	917	937	917	937	0.94
8	17	6.7e-07	4.9e-05	23.3	1.8	2	23	943	964	942	964	0.97
9	17	2.1e-06	0.00015	21.7	0.2	1	23	970	992	970	992	0.99
10	17	0.011	0.8	10.0	3.2	2	23	1004	1026	1003	1026	0.95
11	17	0.43	31	5.0	2.6	1	23	1032	1055	1032	1055	0.92
12	17	0.0015	0.11	12.7	2.6	2	23	1077	1099	1076	1099	0.95
13	17	0.00039	0.028	14.6	0.6	2	23	1106	1128	1105	1128	0.96
14	17	3.8e-05	0.0028	17.8	1.7	2	23	1136	1157	1135	1157	0.97
15	17	0.0011	0.082	13.1	2.3	1	23	1163	1186	1163	1186	0.96
16	17	0.3	22	5.5	3.2	2	23	1193	1214	1192	1214	0.96
17	17	0.22	16	5.9	2.0	1	23	1220	1242	1220	1242	0.95

Sequence Information

Coding Sequence: ATGGATGGAAGTAATATAAAGGACGAACAGGGCACAAATGAACATTTACCCAACTACAAAGATCACGATTACAGTGATTTATCAAATACTGAAAACATAAAAAGTGAATCGTATTCAAAAGAAACAGCCAATAATTATGTTATATGTAATCTTTTAACGACGTCAAGTGATAGTAACAATATGtcattaataaatcataataattctgtgaaacaagtgaaaaatttaaatgatttaaaGAAAGTGATTCcaaaagtgaaaattttagGGGCCGAAGTCAATACTTTGAAGGAATTAACTCAAGCGAATACCaatagtaaatttaatattatggaAAGTAAAACGACAAGAGTGAGTGATTGTAGAAGAAGATTGAACGATTACTGCCGTACGTGTGCTGGATTGAAAATACCTTTGGTAGATATTTTCAGTAATAAAGGTGTTCAAATGCGATTAAATCAACAAATgaaacatttaataaatatagatcAATATGACAGTTTACCGACCCAAATGTGCATGGATTGTATTTGTGATTTAAAAATGagctataaattttttatgcaaATCAAAAAGGctgaaatgaaattgaaatcaaTGTATGCATCAGTGAATGCTGTAACGTCTAATGCTGAATATTTAATAGAGAATCAATGCAATGCTCaatctgaaaataattcaacaaattttaataaatctaTTAATCCACGAGAATGTTCGAACCAATTAAATCAACCGCAATCAGCTTCATCAAATTTGATTAATGCACATACTGAGAATACCCATGACGATAATTGTGATATGCCAAACAGATTGATGGCGACACCGTTAAATAATTGGGATAGTATAAAACATGAAAGCGACCATAACGAAGGATCAATTGAGGAATTTGATCCAGAAGAAAATCCTCTGGAATCAGTAGAGTATACAAATATCACTGAATTCGATCCCGATATCAATaaagttgatgaaaatataaaagatgagATGAGTGATAATAGAGAAGTAATTGATGtaaattgtacaaataatgttgaagaaaataatgaaacgaaTGATAATGTTTTAgatgaaaagggaaaaaaggaaataatagatcagtataatatagataatgataatagcGCGAAAATAGAAGCCgaggatgaaataattaattcatatttgcaACCATTTACAACAATTAATAAAGGAGATCTTTCTAGAGAAAACCTTAAACAaccaaatatattgaaaagaaaagcTTCGTGGCCCAGTAAATCGAGTAATTTTACAAGCCCGCCAGAATCAAAATCTAAAGAAGCTAAAATTCACAAGTTAAACACCGTTAATATTTCACCTTCAGATGAAGAAGGAATAATGTATGTTACAGTAAAAGGCTCAAAGCCAAATGAATTGCTTTTagtaaaagttaaaaaaatggataaatctaatgaaaaaaaagatgataaaaatgcaataaaaaaatcttttgaaattaaatttcctGATAAATCGTTGAAAACATTACCATTGaaagatatttataatgatcgtgcgaaaaaaatggaaagCCGTGAAGCAATTATTGAGGAACAAATCGAACAGTATAAGAAAAAACGTGAACAGGTGCTAGGTAATACTACTAATGCTACTACAAACACTTCTACAATTATTACTCCGACTGAGACTGGTGCACGTAAAACAGAAGAATCTGATGGTGGCACACCgcgttttattaatttcaataacaaTTCTACAGATGATTTGTCTTTCGATGATTcgaaattatcaaaaatagaaTTTCCCACCAACGATAATAACGAGATAAAGATTAAGATGGAAATAGAAAATGACATGCCAATAGAGGATAgcaataaatatgatattctTGAAAATGATGAAGCACAGGGtaatgaacataaaaatacTAACGAGCATTTGGCTCGATTGACAATCATAAAACAGAAGTGGGAAGAGgcaaaagtgaaaaaagaattattgcaAAAACAACTTGATGATTCATATACGGAAGGaaatcttgaaaaattatcgaGAATTTTGggtgaaaaggaaaaaaatttacaagaaTTTCAGGAATATCTGaagcaaagaaaaattgttattactCGATTGAAGGATGAGGACATTATATCACTGTTTGAAGATCGTAATATTACATCGACGCATAAATTATCAGATTTTagtgatgaaaattcaacattacatAATATCggtgatattgatttttttgattgtgACTATTGTCCACAGATATTTTCAACACGAAGTTTACTTGAGGAACATTTGAAGAGTCacgattataaaatttattatttttgtgaggATTGCGGAAGCGAATTTCCTAATAATAAATCTCGTCGAGCCCATAATATTacatgtttaaaaaaattaatatgtaaatattgtgattttatgTTAGAATCGAAAGGAAAAAAGCGTCAGCATGAGCAAAAACATTGTGATACCATTTATGGTCAGCTTTGTGATGTTTGtggtgaaaaatttaaacatcAAGGTACTTTAGATCAACATATAAAAACGCAACACAAAagttgggaaaaagtatttcaatGTCCAAAGTGCCCAAAAAAATTTGctttcaaacaaaaattaagtTTTCATTTGAAATCAGTTCACACAACATTGAGAGCATATTTATGTGAGGATTGTGGTGCTGATTTTAAAAATCCTGCATCACTGAGACATCACAGAATACGAAAACATCAACCAACCAGTAATAAACGTGAGTGTCCAGTTTGTCATAAACTTGTTCCATTTTACAGTTTGTCAAAgcatatgtacacacataagGCATACACAATAGAATGTCCTCATTGCGATAAAATGTTTAAGAACACATCAACATTGAAGCAACATGTAAGAATACACGAGGATCAACGACAATATCGTTGTGATACATGTGGTGTTGGCTTTAATCGTCGGGACGGTCTTCGTTTACATATGAGAGTACATCAAAAGTCTGATGGTCGTGCACTCAAAGAATGTTCATGTCAAATATGCTTTGAAAAATTTCCCAATCATTCAATGCTCGTAATTCATCGTAATAGAGTACACAAAGATGGGAGACAGTATACTTGTCATATATGTAATAGATCAATGCTATCAACTAGGTCTTTGGAATGGCATATGTCACATATTCATAACGAAACTCCATCGGGCATATCGTTGGATGATTCAGAAGCTGCCATTGAATTGAAAAGAGTATCTTGCAATCATTGCGACAAAACATTCAAGACAGAAATGATTTTACGAACACATATTAAAAATACCcatatggaaaaaaatccAGTTAAATGTTTAGACTGTGATTTAATGTTTACATCAGAAGTTCGATTGAGACATCATATGATGATTGTTCATAATCGATTAGAAGGAACATTGACGTGTCCCCACTGTCCAAAACGTTTTGTTAATCAGCTTCGATTAAAAACTCATATGATTTCACACTCAGAAGAAAGACCATATACATGTGAAATATGTGGCTTTAATTTAAAaactaaaattcaattgataaaacatCATCAAAATAGACACAGTGATGAACGACCGCTCCAATGTCGTTACTGTCCATGGCGATGTAAGCAAGTTAGCGCCTTAGTTTGTCACGAGAGGACTCACACCAATGAACGGCCTTATTCATGTATTGTATGTAAACAACGATTCAAATATCTTGGTGATAAGAATAAGCATGAAAGACGGCATGAGAGTCTTGGTGGTTCAGGATTCAAGAGAATTGTTGCTGGGCGCAATGTTAAACAACCAAAAAATCACGATGAAGAAATGGCAGCGTCAGAAAGTGATCTCCTAGAACACGATTACGAGACAATTAATGATCAATATACCGAGGAGCATGTCGTATATGATATTAAGTATGAAGAAGATCAACAggattttaaaaatgatacgCGAGAAATCACCGACGAAGAACGAGATCAGTCTCAGAAACACCAACGACACAATCAACAAGAAATTGATGAAGAAGACATAGAAGAAGACGATTATGATGAAGATGAGGATGGTGATAATTATGAAGAAGACGGaggagaagatgaagatgaagaggatgaggatgaagaagacgatggtgatggtgatggtgatggtgatggtgatggtgatggtgatggtgatggtgacgGCGATGGGGATGGAGATGGAGATGGGGAGGAATCCATGGAGCaccagcaacaacagcagcattTGCAACAGCGAAACGATGATGGTACAGCAGAGATAGATGATGAAGGATACAAACTAGTGTATCACCATGAATATGAGGAAATTTCAAGAGAGGCCACTGGAGCTGCTGAAGTTATTATGAATATGGAAGATGCAACAGTTTACACCGAAGAAGTAACTGCAGATAACATTGAGAATGCCGAAATGATTACTGCAGAAATGGTGACCAATCAAATTTTACAAACTGGAACTGTAGTACATATAGAGCAACAGGATGATGACGGAAAAATCCAGGTGATTCCCGTTATGCTGTCATTACCGGATTTATCAGATTCTActacagaaataaatttagCTGCTGGATcgataatgtataataattga
Protein Sequence: MDGSNIKDEQGTNEHLPNYKDHDYSDLSNTENIKSESYSKETANNYVICNLLTTSSDSNNMSLINHNNSVKQVKNLNDLKKVIPKVKILGAEVNTLKELTQANTNSKFNIMESKTTRVSDCRRRLNDYCRTCAGLKIPLVDIFSNKGVQMRLNQQMKHLINIDQYDSLPTQMCMDCICDLKMSYKFFMQIKKAEMKLKSMYASVNAVTSNAEYLIENQCNAQSENNSTNFNKSINPRECSNQLNQPQSASSNLINAHTENTHDDNCDMPNRLMATPLNNWDSIKHESDHNEGSIEEFDPEENPLESVEYTNITEFDPDINKVDENIKDEMSDNREVIDVNCTNNVEENNETNDNVLDEKGKKEIIDQYNIDNDNSAKIEAEDEIINSYLQPFTTINKGDLSRENLKQPNILKRKASWPSKSSNFTSPPESKSKEAKIHKLNTVNISPSDEEGIMYVTVKGSKPNELLLVKVKKMDKSNEKKDDKNAIKKSFEIKFPDKSLKTLPLKDIYNDRAKKMESREAIIEEQIEQYKKKREQVLGNTTNATTNTSTIITPTETGARKTEESDGGTPRFINFNNNSTDDLSFDDSKLSKIEFPTNDNNEIKIKMEIENDMPIEDSNKYDILENDEAQGNEHKNTNEHLARLTIIKQKWEEAKVKKELLQKQLDDSYTEGNLEKLSRILGEKEKNLQEFQEYLKQRKIVITRLKDEDIISLFEDRNITSTHKLSDFSDENSTLHNIGDIDFFDCDYCPQIFSTRSLLEEHLKSHDYKIYYFCEDCGSEFPNNKSRRAHNITCLKKLICKYCDFMLESKGKKRQHEQKHCDTIYGQLCDVCGEKFKHQGTLDQHIKTQHKSWEKVFQCPKCPKKFAFKQKLSFHLKSVHTTLRAYLCEDCGADFKNPASLRHHRIRKHQPTSNKRECPVCHKLVPFYSLSKHMYTHKAYTIECPHCDKMFKNTSTLKQHVRIHEDQRQYRCDTCGVGFNRRDGLRLHMRVHQKSDGRALKECSCQICFEKFPNHSMLVIHRNRVHKDGRQYTCHICNRSMLSTRSLEWHMSHIHNETPSGISLDDSEAAIELKRVSCNHCDKTFKTEMILRTHIKNTHMEKNPVKCLDCDLMFTSEVRLRHHMMIVHNRLEGTLTCPHCPKRFVNQLRLKTHMISHSEERPYTCEICGFNLKTKIQLIKHHQNRHSDERPLQCRYCPWRCKQVSALVCHERTHTNERPYSCIVCKQRFKYLGDKNKHERRHESLGGSGFKRIVAGRNVKQPKNHDEEMAASESDLLEHDYETINDQYTEEHVVYDIKYEEDQQDFKNDTREITDEERDQSQKHQRHNQQEIDEEDIEEDDYDEDEDGDNYEEDGGEDEDEEDEDEEDDGDGDGDGDGDGDGDGDGDGDGDGDGDGEESMEHQQQQQHLQQRNDDGTAEIDDEGYKLVYHHEYEEISREATGAAEVIMNMEDATVYTEEVTADNIENAEMITAEMVTNQILQTGTVVHIEQQDDDGKIQVIPVMLSLPDLSDSTTEINLAAGSIMYNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -