Dcoc003626.1
Basic Information
- Insect
- Dinocampus coccinellae
- Gene Symbol
- -
- Assembly
- GCA_963920625.1
- Location
- OY987185.1:4070621-4081232[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 32 6.2e-06 0.00045 20.2 1.0 1 23 226 248 226 248 0.98 2 32 0.0027 0.2 11.9 1.9 1 23 271 294 271 294 0.96 3 32 0.00019 0.014 15.5 0.5 2 23 301 323 300 323 0.96 4 32 0.00037 0.027 14.7 0.5 1 21 343 363 343 364 0.95 5 32 0.013 0.93 9.8 0.1 2 23 469 490 468 490 0.95 6 32 0.02 1.4 9.2 0.2 1 23 496 519 496 519 0.91 7 32 0.00012 0.0086 16.2 0.1 1 23 591 614 591 614 0.96 8 32 0.0072 0.53 10.6 0.5 1 23 620 643 620 643 0.96 9 32 0.15 11 6.5 1.9 1 23 656 678 656 678 0.97 10 32 4.1e-05 0.003 17.7 1.1 3 23 726 747 725 747 0.96 11 32 4.7 3.4e+02 1.8 0.3 1 23 779 802 779 802 0.82 12 32 0.012 0.84 10.0 0.9 2 23 809 832 808 832 0.93 13 32 3.1 2.3e+02 2.3 0.0 2 23 841 863 841 863 0.84 14 32 0.052 3.8 7.9 0.1 2 23 870 892 869 892 0.95 15 32 1.3e-05 0.00095 19.2 1.2 1 23 900 922 900 922 0.98 16 32 0.069 5 7.5 0.7 7 23 963 980 956 980 0.84 17 32 0.00021 0.015 15.4 3.3 1 23 983 1006 983 1006 0.97 18 32 0.0049 0.36 11.1 0.5 2 23 1013 1035 1012 1035 0.95 19 32 0.0032 0.24 11.7 5.1 1 21 1064 1084 1064 1085 0.95 20 32 0.0027 0.2 11.9 1.8 2 23 1099 1120 1098 1121 0.93 21 32 0.13 9.5 6.6 1.1 1 23 1124 1147 1124 1147 0.95 22 32 0.0079 0.58 10.5 1.1 2 23 1154 1177 1153 1177 0.93 23 32 0.67 49 4.4 0.1 2 23 1185 1207 1185 1207 0.94 24 32 6.3 4.6e+02 1.3 0.0 2 23 1214 1236 1213 1236 0.87 25 32 0.23 16 5.9 2.7 2 23 1245 1267 1245 1267 0.96 26 32 8.4 6.1e+02 1.0 0.7 2 23 1273 1295 1273 1295 0.90 27 32 0.007 0.51 10.6 0.6 1 23 1357 1380 1357 1380 0.97 28 32 3.5e-05 0.0025 17.9 0.2 1 21 1406 1426 1406 1427 0.95 29 32 0.49 36 4.8 1.3 2 23 1529 1551 1528 1551 0.93 30 32 0.65 47 4.4 1.5 2 23 1558 1580 1557 1580 0.94 31 32 0.69 51 4.4 2.5 1 23 1591 1613 1591 1613 0.97 32 32 4.3 3.1e+02 1.9 0.1 3 21 1622 1640 1622 1641 0.94
Sequence Information
- Coding Sequence
- atggagtcGAGGGAACGTTATGATGAGCTGTGTAGGCTCTGTGCTTCATATGACGCTGTCAAAATGGATATATTCGGTCAGGAAGGCAAAAATCGTCAACTTGTCGATAAAATACAAACGTGTTTGCCATTCAAGatTGCTGAAGATGATAGATTACCAAAATGTTTGTGCTACAGGTGTATGTAcaatcttgaaaatttttatgactTCAGAACAGCTTGCGTCAATGCAGTTGCATTACTCGAACGTtcattatcacaaaaaaattctTCAAATGGTCAAATTCGGAGTGAAATGGATCAACATTCCGAGTTACGTTCAGAATTActtaaagaaaaagaaaaaatgccAATTCTTATACCTGAAGCACCCATCGTAAATCCTAATGCCGCTCTGGGCACACCACCACGTTTAAATTCTGACGGTGAGGCCGATCAGGAAATCGAAGAAATCCTCGACCAGAGTGGTACTGACGAAGgAATGGATGATAATGAGGACAGAAAATCTGATGAATATGAAATGGATATGGAAACGAATCCAAGTGATTTCTTAGAAATGCCACCAATGGTAACTGAAGATATTGAAGATATTGATGATggaaataatcatcatcagcaACAATTAAATTCTCAACAGCCAGCAATTTTCCAACATACATCGGAGCAACATGAAGTTTATGTTTGTTCTCTGTGCAATAAGGCCTTCAGTTCCAAGGGCCATTTGTCATTGCACGCGCGCATTCATGTGGGCGGTGGTGATGTAATTGGCGAGAAAGTCATCACTGACGATCATACATCGTACAAACGACCTTATCAGTGTGATCTGTGTAACAAATCATATTCCACCGCAAAGCATCGATGGGGTCACGTATCGACAACTCATCGGGGTCATCCAGCAGTAACATGTGGATATTGTTCGCGAATATATTCGACGCGTTCAAATCTTGATGAGCATATAAAATCACGACACACTGGTTTACCACCACCTCCTGAATTGCCAGGTGCTTATATGCAGCAAGAAAATCGATATAGATGCAAAACATGTCCAAAAATGTATACCAATATTacagaattaaataaacatagTCGAATATGCATTGGTGATCGACAGAAGGATATTATACCGCGTGGAATTGTAATTCAATCAGTTAAACCAAAAGGTAAAAGCCTCATGGACACTTCAGATGCATCGACAATTGAGTCGGAAGATGATGGTAAAGATTATCGTAGTGCTGAAGCAAAATTATCGAAGAATCCACAGTTAACTATATTAAAACAAGCATTGACAAGAAGTGAAGGATTAAAACGCACATCAGAAGGTAGAATTTTACCATACAAATCATCGAGAGTTTCGCAAGCTGATAATAAAAATCGCGTTGACTCTGAGGATGGACAGAAGAGATGGTATTGTGAAACATGTCCAcaatcttttatttcaattgaattattgaaagatCACGAGGTTACACATGAAACAGAAAAAccgtatatttgtatattgtgtGAAAAAGATTTTGTATTAAAGTCATCATTAAGTAGGCACATTGTTACGTCGCATGGTGTTGATCCAGTGCCAATTGTGGAGAGTgataaatgtttaaaaaaagtAGTTAAGGCTCAAaatagtagcagtagtagtggTAAACATTTGTCGAGAGTAGACGAATTGAAAGCTAAACGTGAACCTTCatctgaaatttcattttcatctgatCGTAATGACGAGGACGAACGTGgcaatgatgaaaatgtcATTGAAATAGAAACAGTATTTGTTTGTGAAATTTGTACACGTGACTTCAATGATCGTGCATCATTGTGGCTTCATATACGTGCAACACACAAAGAATTCGCTGCGTTTGCGTGTGGCgtttgtttaaaaatttgCTCGGACAATGAACAATTGCTCAATCATGTTAATATGTATCACGGTGGTACAAAAATGTCCATGTCAGATCAGCGTCGTTACAGTTGTACAATATGTGGTAGACAGCAtgattcaagaaaaaaattaatgacacaTGTTTCAATACATAATGTTGAACCTGGTTATGATCCAGCTGGTTTTGTACAATTGAATAGCAATTATTACAACGAAAATTATAATAGCAACGAAGGCATAAATATTGAACATAATAGTATTGATTTTGATGCTGAAGACGGTGAAAAAGTTGATTGTTTCATTTGCTATAAATCATTTCCAAATGAGGATCATTTAATTCGTCATCAACGAAATGCGCATAAATCCGAGCCAATATCTGCGAGTGGTGAATTAACAAGTTTGAATGGCACTGGTATGAATCCAAATGGTAATAAGGgacaatatcatttattttttgtttgtgaaaTATGTGGGAGTTCGCATTCGAGTAAATGGGAACGTTGGCTACACGTTAGCAGTGTTCATCAGGACGAATCATCAATTAGATGTGAGCGTGATGattgtggaaaaatatttgccactaaatcattaaaaaatgaacACGCACAGCATCATATGCTTCAGGGTGAATCACCGAATACATGTGAAATATGTGGAAAATTATGGGGAAGTCGTGTGGATTATTGGAAACACGTTATGGGTGTGCATTCAGACACGGTACCATTAATTTGTGGTGTTTGTCTAAAAGTATTCCCTGATGTAATTCAATTGAGTACACACGTTAAAAGTAAACATTGGCCATTAACCACGGGTGATTTTAGTTGTGACATTTGTGGACGTCCTTATtcgaataaatcaaaaatgtcGAGACACAGAAAAATTCATGGTTTAGAAGTTGATATTGAATACAGTAATGGTATGAATGAAACACTGAATGATACAACAATGAACTTTGAATCGAGTACTAATGTAGTTGAGATTGATCTGACGTGTGGATTGTGTGCGGGATTAACATTTGTCGATTGGAAAGATCTTTCTCATCATCGGCGTACGAAACATTCATTATTCCCATGCGATTTGTGTAATAAATGTTATGGTAGAACGTCACATTTATGGAAACATGTTAATCGCGTTCATAAAGGTCATGAAGATGttacatgtaaatattgtaTGAAAACTAGCGCGTCCAAAGATCATTTAGCTGCACATATTGCGAAAATTCATCGTTACGAACCcgacacaaaaaaatttattaatgaaactTCAAATTACAAAACGTCAAATATCGAAGAGGATATAGGAGCTGTTCATCATTGTGAAAAATGTAACAAAGGTTTTCACAAGCGTTATTTATTACGACGTCACATGAAAGGCTGTCAAAATTATCGCAAAGATCCAGGTGCATTATTGACACGTTGTCGTGCGTGCGAAAGAATATTTAAAGATCGTGCAAGTCTACAAAAACACATTGAAAATCATCATAGTAGTTATACATGTCATTTGTGTAATGAAACTGTAACATCAAAACTCGGTATTATGACACACAATCGTGTCAATCACATGGACCATCCTGATCTCACGTGTGATAATATTAACTGTAAAAAACTATTTCGTACAAAGGAAGATTTAGAATCACATAAAAAAGatcataaatatcataatacaCCGAATGTTTGTGATTATTGTGGTGACACAGTGGAAAATAaacttaaattaaaaatgcacGTTCTTTCACTGCATCGCAATGAAATTGGCGTTTCATGTGGTGTATGTTTAATTCCAATGAGAGATCCACAAGACTTGAAGAAACACGTTGAAGATGTTCATTCAATGGTGCTTTTAATGCCAAATACGTGTCAAGTTTGTGGCAAACAGTATGCATCAAAATGGAAAGCATTTGATCATACGAAAAAATGTCACGGTAAAGTATTTAGAACTTGTAAACGATGTCTTGCTGTTTTTACAACTGATGCTGATATAAGATATCATTATGAGCATATTCACAATGTGCCCAAAGATCAATTGGCTGGTTTTGAACATCATTCAGATGTGTCTGGCAAAGGTGATGATAACGATAATTCTAAAGCTATTAAAGAAGAATTCGATGATTTGGAGTATGATAATAGAActtacaataatatacatcatTACAAAGGACGAAAACGTAAACGTTCTCATCATGATACGTATGATTGTGAAATTTGTccggaaatatttttaaatcatgaCACATTGTCAAAGCATTATCAGACAATTCACAATACTGATCCTGAAAGAAtgtttaaaaaatcaaaaacgaCCAATTCAAGAAGATCCAAGAAAAATCGTGACaattttgaatgtaaaaattgtGACAAACAATTTGGTACAAATTCACAATTGTGGAATCATATCAGTGTatgtacacaaataaataattctatgcAAGATGAAtcaccaaataatttttcaacatccATACTAGAatcacatttgaaaaataataatcaaattaaaaaagagCCTATTGATACAATTCtcaatgaaacaaatttaaatattccggatttcaatttatttgaagatataaatttacaattatctgGACAAAAACCAGTACCAAATCTCATGCCACTATCTCATATGAAAATGTCACAGGGTACCATTAAATGCTATCGCAAGGATTCACGAAAAGTTTATGACGAATCAACTAATACAGTTTGTGCATGTGAAGTTTGCGGTAAACAATGGCCggcaaaaaaacatttatggCAACATTTAATTAGATTTCATCGTGCCGAAGCTGCAGTAACTTGTGGCGTTTGTTTAAAACTTTGCAGTACCTATCGAGATTTATCACAGCATTTGAAGGATACTCATGAAGCAATATTGTCATGTGAGGGAAATAATTTCACGTGTAAAACATGCGGACGTTATCACAATGCTCGAAGTAAACTTTTACTACATATGAGcattcatatcaataataatgagcATATTTGGTGTGCAAAATGTGCAATGAGTTTTGATAGTGAGGAAAAACTCGGgcaacatttgaaaaattgtgtgaTGAAACGTCGCATTGAAGGTATTGAATTTGAGGAGCAAAGTATTGATTTAGAGGATGTAAAAATGGAAGGTGATGAGGATAAAGGTAGTCTCATTGGTGATGAAGCTTCGTTACTTGGTGAAGGTGAGGAAGAAGTTGATTTTGATTCTGAAGTCGAAGAGGAGGCATCCGATGTTGAAAATCACGATGAACACAGTAATTTAGATCATTCTGATGACTCGGACACCAGTAGCAATGGCAGTGGAAGTGAAGTTGAAAATGACGAAAATGAAGTGGAATCTCGAACTAATAGCAGAATAACCGGTGACGTTAGTTGCCAAACAGACAGTGATGATCGTGACTCAGATGAGTTCgatggtgaaataaaaaatgttgaaaaacaaatagaTAAATCTAGACGACGTGATCATTGGCGTGAGAATAAAAGTCACAATGATATGACAAAAAACGATAGAATTGATAGCGGTGAAGTTGGGGAAAACGAACAGGAGGTGCaagaagtgaataaaattaatgaaaaaaaagaaaaaactcaCAGTCGAGAACAAAAAGATGTTGATGATACGGACGATGATGGCCCACCTATTTTAAGTCCAATGATGCCAATTGCCATTAACAATAAATCGGACGATAGGGATTATAATCTCAATGATGCCTCAAGCCACAAATTGAGTTCCATTGTGTCACAAAATcctgaagatgaaaatgaaaacgaGCTTCCTGAACTCGATGGTATTAACgatgttgatgaaaatattgctGGAAcatcgaccaattcgaatacCGCTGATTACGATGAGTATTCGTCAACAGCAAAATCAAATGTCAGTGCTGTTCCATCAATGGAAGGAATTGAATTGGAcaatgaagaagaagtagaagaagaaggagacgaagaagtagaagatgaagaagaagatgcggaagaagaagaggatgaGGAAGAGGTAGGAGAAgatgacgaagaagaagaggaaattcaagatgatagAGATGTAGATGAAAATATGGCAGATGATGACAGTAGATTACACATTGAACAATCaacaattaatacaatattgatGAAGGAAGACGAAGAAAATATCCAAGATAATAATTCCAatattgaagatgaagaagaagcagACGAAGAATTTGTAGATGAAATCGGTGGTGATGCTGTACAAATTGATGATTTAGATGGGACTGTTTTGATGGTTGCCAATGATGATGAAGGTAATCAAATACTGATTCAACGAAATGTAAATGACATGAATAATGATGAGTCAATAGAGGGTGTTACGAGTTACATTTATGAAGAGGAAAATGAAACGGAGCATTATGATGAGGATGAACAGAATATTTATAGAGATGAACAGGAAGAAGGTGTTGAAAGTCAAGATGacaatgaagaaattaatagaaaaatgatgatgatagaagaggacgataatgatgatgacgaggATATAGAACATCATGTAATCATGATTGAAAGTGGTAATGAAGATGATAGTAACGGTTTGGAGGCTAATTTAAGTGCCAAAAATGATGTGTCAAGGAcgtag
- Protein Sequence
- MESRERYDELCRLCASYDAVKMDIFGQEGKNRQLVDKIQTCLPFKIAEDDRLPKCLCYRCMYNLENFYDFRTACVNAVALLERSLSQKNSSNGQIRSEMDQHSELRSELLKEKEKMPILIPEAPIVNPNAALGTPPRLNSDGEADQEIEEILDQSGTDEGMDDNEDRKSDEYEMDMETNPSDFLEMPPMVTEDIEDIDDGNNHHQQQLNSQQPAIFQHTSEQHEVYVCSLCNKAFSSKGHLSLHARIHVGGGDVIGEKVITDDHTSYKRPYQCDLCNKSYSTAKHRWGHVSTTHRGHPAVTCGYCSRIYSTRSNLDEHIKSRHTGLPPPPELPGAYMQQENRYRCKTCPKMYTNITELNKHSRICIGDRQKDIIPRGIVIQSVKPKGKSLMDTSDASTIESEDDGKDYRSAEAKLSKNPQLTILKQALTRSEGLKRTSEGRILPYKSSRVSQADNKNRVDSEDGQKRWYCETCPQSFISIELLKDHEVTHETEKPYICILCEKDFVLKSSLSRHIVTSHGVDPVPIVESDKCLKKVVKAQNSSSSSGKHLSRVDELKAKREPSSEISFSSDRNDEDERGNDENVIEIETVFVCEICTRDFNDRASLWLHIRATHKEFAAFACGVCLKICSDNEQLLNHVNMYHGGTKMSMSDQRRYSCTICGRQHDSRKKLMTHVSIHNVEPGYDPAGFVQLNSNYYNENYNSNEGINIEHNSIDFDAEDGEKVDCFICYKSFPNEDHLIRHQRNAHKSEPISASGELTSLNGTGMNPNGNKGQYHLFFVCEICGSSHSSKWERWLHVSSVHQDESSIRCERDDCGKIFATKSLKNEHAQHHMLQGESPNTCEICGKLWGSRVDYWKHVMGVHSDTVPLICGVCLKVFPDVIQLSTHVKSKHWPLTTGDFSCDICGRPYSNKSKMSRHRKIHGLEVDIEYSNGMNETLNDTTMNFESSTNVVEIDLTCGLCAGLTFVDWKDLSHHRRTKHSLFPCDLCNKCYGRTSHLWKHVNRVHKGHEDVTCKYCMKTSASKDHLAAHIAKIHRYEPDTKKFINETSNYKTSNIEEDIGAVHHCEKCNKGFHKRYLLRRHMKGCQNYRKDPGALLTRCRACERIFKDRASLQKHIENHHSSYTCHLCNETVTSKLGIMTHNRVNHMDHPDLTCDNINCKKLFRTKEDLESHKKDHKYHNTPNVCDYCGDTVENKLKLKMHVLSLHRNEIGVSCGVCLIPMRDPQDLKKHVEDVHSMVLLMPNTCQVCGKQYASKWKAFDHTKKCHGKVFRTCKRCLAVFTTDADIRYHYEHIHNVPKDQLAGFEHHSDVSGKGDDNDNSKAIKEEFDDLEYDNRTYNNIHHYKGRKRKRSHHDTYDCEICPEIFLNHDTLSKHYQTIHNTDPERMFKKSKTTNSRRSKKNRDNFECKNCDKQFGTNSQLWNHISVCTQINNSMQDESPNNFSTSILESHLKNNNQIKKEPIDTILNETNLNIPDFNLFEDINLQLSGQKPVPNLMPLSHMKMSQGTIKCYRKDSRKVYDESTNTVCACEVCGKQWPAKKHLWQHLIRFHRAEAAVTCGVCLKLCSTYRDLSQHLKDTHEAILSCEGNNFTCKTCGRYHNARSKLLLHMSIHINNNEHIWCAKCAMSFDSEEKLGQHLKNCVMKRRIEGIEFEEQSIDLEDVKMEGDEDKGSLIGDEASLLGEGEEEVDFDSEVEEEASDVENHDEHSNLDHSDDSDTSSNGSGSEVENDENEVESRTNSRITGDVSCQTDSDDRDSDEFDGEIKNVEKQIDKSRRRDHWRENKSHNDMTKNDRIDSGEVGENEQEVQEVNKINEKKEKTHSREQKDVDDTDDDGPPILSPMMPIAINNKSDDRDYNLNDASSHKLSSIVSQNPEDENENELPELDGINDVDENIAGTSTNSNTADYDEYSSTAKSNVSAVPSMEGIELDNEEEVEEEGDEEVEDEEEDAEEEEDEEEVGEDDEEEEEIQDDRDVDENMADDDSRLHIEQSTINTILMKEDEENIQDNNSNIEDEEEADEEFVDEIGGDAVQIDDLDGTVLMVANDDEGNQILIQRNVNDMNNDESIEGVTSYIYEEENETEHYDEDEQNIYRDEQEEGVESQDDNEEINRKMMMIEEDDNDDDEDIEHHVIMIESGNEDDSNGLEANLSAKNDVSRT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01560624;
- 90% Identity
- -
- 80% Identity
- -