Basic Information

Insect: Dinocampus coccinellae
Gene Symbol: -
Assembly: GCA_963920625.1
Location: OY987188.1:3442068-3449475[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.6e-05 0.004 17.2 2.4 1 23 463 485 463 485 0.98

2 18 8.8e-06 0.00064 19.8 1.3 1 20 491 510 491 513 0.94

3 18 2.7e-05 0.002 18.2 0.7 1 23 519 541 519 541 0.98

4 18 0.00026 0.019 15.1 3.6 3 21 549 567 547 569 0.94

5 18 2e-05 0.0015 18.6 4.6 1 23 575 597 575 597 0.99

6 18 2e-05 0.0015 18.6 5.3 1 23 603 625 603 625 0.97

7 18 7.8e-06 0.00057 19.9 7.1 1 23 631 653 631 653 0.97

8 18 7.6e-08 5.5e-06 26.3 2.7 1 23 659 681 659 681 0.98

9 18 5.6e-05 0.0041 17.2 6.7 1 23 687 709 687 709 0.97

10 18 1.7e-05 0.0013 18.8 5.8 1 23 715 737 715 737 0.98

11 18 4.6e-07 3.4e-05 23.8 2.9 1 23 743 765 743 765 0.98

12 18 6.9e-06 0.0005 20.1 7.8 1 23 771 793 771 793 0.98

13 18 2.2e-05 0.0016 18.5 9.1 1 23 799 821 799 821 0.98

14 18 2.8e-05 0.0021 18.2 7.5 1 23 827 849 827 849 0.98

15 18 0.0014 0.099 12.9 8.8 1 21 855 875 855 877 0.94

16 18 1e-05 0.00076 19.5 0.4 1 23 883 905 883 905 0.98

17 18 0.025 1.8 8.9 4.5 1 23 915 937 915 937 0.98

18 18 2.7e-07 2e-05 24.5 1.6 1 23 943 965 943 965 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.6e-05	0.004	17.2	2.4	1	23	463	485	463	485	0.98
2	18	8.8e-06	0.00064	19.8	1.3	1	20	491	510	491	513	0.94
3	18	2.7e-05	0.002	18.2	0.7	1	23	519	541	519	541	0.98
4	18	0.00026	0.019	15.1	3.6	3	21	549	567	547	569	0.94
5	18	2e-05	0.0015	18.6	4.6	1	23	575	597	575	597	0.99
6	18	2e-05	0.0015	18.6	5.3	1	23	603	625	603	625	0.97
7	18	7.8e-06	0.00057	19.9	7.1	1	23	631	653	631	653	0.97
8	18	7.6e-08	5.5e-06	26.3	2.7	1	23	659	681	659	681	0.98
9	18	5.6e-05	0.0041	17.2	6.7	1	23	687	709	687	709	0.97
10	18	1.7e-05	0.0013	18.8	5.8	1	23	715	737	715	737	0.98
11	18	4.6e-07	3.4e-05	23.8	2.9	1	23	743	765	743	765	0.98
12	18	6.9e-06	0.0005	20.1	7.8	1	23	771	793	771	793	0.98
13	18	2.2e-05	0.0016	18.5	9.1	1	23	799	821	799	821	0.98
14	18	2.8e-05	0.0021	18.2	7.5	1	23	827	849	827	849	0.98
15	18	0.0014	0.099	12.9	8.8	1	21	855	875	855	877	0.94
16	18	1e-05	0.00076	19.5	0.4	1	23	883	905	883	905	0.98
17	18	0.025	1.8	8.9	4.5	1	23	915	937	915	937	0.98
18	18	2.7e-07	2e-05	24.5	1.6	1	23	943	965	943	965	0.98

Sequence Information

Coding Sequence: ATGAATAGTGAACAGCATGCACTGCCAGCGACTACGCAGGCACAGCAAGAGGAAGTAAACGTGGGTCAAAGCGGTCGTCCTTCTTATCCGGGTGGTTTGGCTACTGCCACGAGTGTCGGGAATGTAGGGAGTACAGTCCCGCATTCTTCCGCAGACCTACGTGTAGGTACAGCCGTAGCATTAGCTTCATCAGTAGCTAAATATTGGGTCCTCACCAATCTGTTCCCCGGACCGCTACCTCAGGTGTCAGTTTATCACCATCCCCACCATAACTCCTCGCATAGGAGCggtaatggtggtggtggtggtagcgGCGGTGAACCATCAACCAAAGATCAAGGATCCACGTTGTCGCAGGATATGGCGTTGACAACTAATACCCATCATCAAGCAGTctcttctcatcatcatcaacagcaacagcaacagcaacagcaacatcaACCTGCAGTGAGCAGCAGTCATCACACTTCTTTACAATCAACCGCGCAGATTCCAGTTTCTCTTCCTGGACTCAATCTAGACGGTACACATATACCAACGAGTCATCTGCAAGCTGCACACGCTCAGATGCAGCAGCAAATGCAAtcacagcaacagcagcaacaacaacaacaacagcagcagcaacagcaacaattaCATCAACAACAGCAAGCACACCATCAAATGCAAAACCATCAAAATGTACAAAATAGTGGATCAAGTTCACAGAATCAATCATCGCAGCGTGTCgacgagaataaaataaaggatGAGGGGAGTTGCACCACGGAACGTTGCAGTGATAATCAAGTACACTGTCAGGTACAATGTGATCTTCAACTTCAACAACCACAAGATTTACAACAAAGTATGatgcaacagcagcagcagcaacaacagcagcaacaacagcagcagcaacttGCTGTAAATATCAGTAGTAATTCTGGAACCGATAATGGCAATCAAAATTCTGAGAAACCAGAGAAGGAGAAGGAATTGAGGCAGTTGAATATGActcaATTTCAAGTACCAGATTTGAAACCTGGCGGTCATATGATGGATGTTAGAACAGCAGATGGCTCAGTGGTTAAAATAAGTGCGGGGAATGAACAAGATCTTGCTAAAACCCTTGGCGTGGAGATGGTACAAAATATGTACAAGGTAAATGTTGAGGATATAAATCAACTACTGGCTTACCATGAAGTTTTTGGTAAACTACAGAGTGAAATTGCCGCAGGAACAACACTGGTTGGTGGTACAGTACCCACTCAAACAGTGACAACAATTCAAAATGGTACACCAATTGTTCAACAAgtgcaattgaataaatttgatataaaaacgAGTGATGGTGAAGCGACACCAGGACCAAGTGCATCACCAGTATCAGTTGGCAGTCATACGTGTGAAGTTTGtggaaaaatattccaatttcGTTATCAGTTGATTGTACATCGTCGCTATCACACTGAACGTAAACCATTTACGTGTCAGGTGTGTGGTAAAGCATTTTCAAATGCTGCCGATTTGACACGCCATGGAAAATGTCATCTTGGTGGTTCAATGTTTACATGCGCAGTTTGCTTTCATGTATTTGCAAATGCTCCATCGCTTGAACGTCACATGAAACGTCATGCAACTGATAAGCCATATGGCTGCACTGTTTGTGGAAAAAGTTTTGCACGTAAAGAACATCTTGACAATCATACGCGTTGTCATACGGGTGAAACACCATACagATGTCAATATTGTGCCAAGACATTTACGCGCAAAGAACACATGGTAAACCACGTAAGAAAACATACGGGCGAAACGCCACATCGATGTGACATTTGCAAAAAAAGTTTCACACGTAAGGAACATTTTATGAATCATGTTATGTGGCATACAGGTGAAACACCACATCATTGTCAGGTATGCGGCAAAAAGTATACCCGCAAAGAACATTTAGCGAATCATATGCGTTCGCATACCAATGACACGCCGTTTCGCTGCGAAATTTGCGGTAAGTCGTTCACGAGGAAGGAACACTTCACGAATCACATAATGTGGCATACGGGTGAAACACCGCATCGCTGTGACTTCTGTTCAAAGACATTTACCCGAAAGGAACATCTACTCAATCACGTACGACAACACACGGGTGAGTCTCCACATCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAACCACATCCGCCAACACACAGGTGAAACTCCTTTCCGTTGTCAATACTGTCCGAAAGCTTTTACGCGGAAGGACCATTTGGTGAACCATGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCGTTCACACGGAAGGAACATTTGACAAATCACGTGCGTCAACACACAGGCGAATCGCCCCATCGATGCCACTTTTGCTCCAAGTCGTTTACACGAAAGGAGCATTTGACGAATCATGTCCGAATTCACACTGGTGAATCGCCACATCGTTGTGAATTTTGTCAGAGAACATTTACCAGGAAAGAGCATCTTAATAATCATCTGAGACAACATACCGGGGATTCATCACACTGTTGCAATGTATGCTCCAAACCATTTACGAGAAAGGAGCATCTTGTGAATCACATGCGTTGTCATACAGGCGAGCGTCCATTCGTTTGCACCGAGTGTGGCAAGAGTTTCCCATTAAAGGGAAATCTTCTTTTCCACATGCGTTCACATAACAAGGGTAGCAACGCTGAACGTCCATTCCGTTGTGATTTATGTCCAAAAGATTTTATGTGTAAAGGACATTTGGTGTCACATCGACGTTCACATTCGGATGAGCGACCGCATCGGTGTCCGGATTGCGGCAAAACATTTGTCGAGAAAGGCAATATGCTGAGACATTTGCGAAAACACGCGGCTGAAGGACCGCCAACGCAAGTTAGTACACCATCAGCGATTCCTCAACCAGGTGTATTGCCATTGCCAACTGCTGCTGCTGTACTCGTTGGCCATCCATTAGCACCACCAGCACCACCAGTTGTTCCACAACACACCGTTGTTGTGCCAACACCACCAGGTGTGTTAACGTCTTACTGA
Protein Sequence: MNSEQHALPATTQAQQEEVNVGQSGRPSYPGGLATATSVGNVGSTVPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHPHHNSSHRSGNGGGGGSGGEPSTKDQGSTLSQDMALTTNTHHQAVSSHHHQQQQQQQQQHQPAVSSSHHTSLQSTAQIPVSLPGLNLDGTHIPTSHLQAAHAQMQQQMQSQQQQQQQQQQQQQQQQLHQQQQAHHQMQNHQNVQNSGSSSQNQSSQRVDENKIKDEGSCTTERCSDNQVHCQVQCDLQLQQPQDLQQSMMQQQQQQQQQQQQQQQLAVNISSNSGTDNGNQNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTADGSVVKISAGNEQDLAKTLGVEMVQNMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGGTVPTQTVTTIQNGTPIVQQVQLNKFDIKTSDGEATPGPSASPVSVGSHTCEVCGKIFQFRYQLIVHRRYHTERKPFTCQVCGKAFSNAADLTRHGKCHLGGSMFTCAVCFHVFANAPSLERHMKRHATDKPYGCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCAKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCQVCGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHRCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQPGVLPLPTAAAVLVGHPLAPPAPPVVPQHTVVVPTPPGVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00997203;
80% Identity: -