Dcoc001968.1
Basic Information
- Insect
- Dinocampus coccinellae
- Gene Symbol
- bab1_2
- Assembly
- GCA_963920625.1
- Location
- OY987184.1:13781448-13783299[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.4 4.5e+03 -2.8 0.0 8 21 86 100 84 100 0.65 2 2 8.1e-13 5.7e-10 38.5 0.0 4 45 368 409 365 409 0.95
Sequence Information
- Coding Sequence
- ATGGGTACCTCATCAGACCAACATTATTGTCTACGATGGAACAATCATCAGCTAAATATGTTGACGGTGTTCGATGAATTATTGCAAAATGAAGCGTTTACAGATGTTGCTCTTGGTGTTGATGAAGGAATTTTCGTTAAATGTCATCGTATGATATTAGCCGCTTgttcatcatattttcaaaAGCTCTTTGTTGAAATACCATGTAaaaatccaattattattctgaAAGATGTGAAATATACACAGATAAAAGCTATTCTTGAATATATGTATCGCGGTGAAGTGAGCATTGCCCAAGATCAATTGTCGACACTGTTGGAAATTGCTGAATGTTTGAAAATCAAAGGTTTGGTAGAAGACAATGGTTCATCATCCACTGCAGATGATGTGTCTCAAACACCGCAAACAACTCAATGTTGCCCGGAGCCTGAAAATTCCTCATCGCCACCGCCGGCAATTTCTACAAGTACAATGTCCAACGCAGCGAATAACACGGAAAATGGTAATGATCGCAGCTCACCCCCACATTCAACTAGTAGTGCACCTTATCATATTTATGGAAAATCAGCACCGATTAATCGCACCCATATTGATCCTCGCATACCCACTACACCCACTATGTGGAATATTCCATTTGCCGGACATCCAAATTTAACAATTGCCCATCAAACATCTCAATCAGCCCATCAACAATCATTTCTCGCGTCGCATTATGAAAGTCTTGATCCACATATTAATACAAGAAGACAGCCAAATTTACCGAATTTTTTAACTAACAATCGTGACACGCCAATTTTACGTGGTGTCCTTGGTCAAAGTCACGTTGATAGCTCACAAGGAATGTCGATATCACGACCAGAGAGTCGTGATTATCGTAGTCCAAGTAATGAATCtaccaatgaaaatattgatgttaAACGCAATAGCATGGATATATCTAATGACCGTAACAGTATGGACTTGAGTGGATATAATCTTTCGCCAATCGATGATGAACGAGAACGAGTGCGAGAACGCAGACGTTCACCCAAATCATACGAGGAGACTAAACgacCTCAAAAACCAGAGTGGAAGCGTTACAAACAATATACAAAACAAGATATAGAACGCGCAATTGAAGATGTTGGAAATGGTATGAGTGCACTTAAAGCTGCAAAAAAACACGGTGTCCCATCGCGTACTCTCTATGATAAGGTAAAGAAAATGGGTATGGCACATTCAAGACGTAGTGTAAACTCAAGTTCAGCAAGTTTTCCCCGTGGAATTGGTGGCAATGTCAATGGAAGTATTTACGcatcaatttacaataatgACAACGACAATCTTCATAGTAATCTTAGTAGAATAACATTGGAAACTCCTGCGGCAATAATAGAAGCAGCCTTGTCAAAACATCGTGATAGTTCTAATGACCATGAGGCAGAAATGGAAATGATATCTAGAACAAGAGCAAGTTCAAGTCCTATTTTATCTCATCATTCGAATTTATCACAACAGCAGCACCAATTACCACCGCCATTACCACtgccactaccactaccacctccaccaccaccaacaccaACACCGACACcaacacaacaacaacaacaacaacaacaacaacaacagctgCAACAGCATCAACCGCACCAACCAGATACTGATGATGAAGTTGAGGATCTTTCGATAAATCGAAAATCTGATCAGCGAGTGATTATGTCGCCACCTATTgtgaaagaagaaatgatTGATCCACCTGAAAATTTAAGCCGCAAGTAA
- Protein Sequence
- MGTSSDQHYCLRWNNHQLNMLTVFDELLQNEAFTDVALGVDEGIFVKCHRMILAACSSYFQKLFVEIPCKNPIIILKDVKYTQIKAILEYMYRGEVSIAQDQLSTLLEIAECLKIKGLVEDNGSSSTADDVSQTPQTTQCCPEPENSSSPPPAISTSTMSNAANNTENGNDRSSPPHSTSSAPYHIYGKSAPINRTHIDPRIPTTPTMWNIPFAGHPNLTIAHQTSQSAHQQSFLASHYESLDPHINTRRQPNLPNFLTNNRDTPILRGVLGQSHVDSSQGMSISRPESRDYRSPSNESTNENIDVKRNSMDISNDRNSMDLSGYNLSPIDDERERVRERRRSPKSYEETKRPQKPEWKRYKQYTKQDIERAIEDVGNGMSALKAAKKHGVPSRTLYDKVKKMGMAHSRRSVNSSSASFPRGIGGNVNGSIYASIYNNDNDNLHSNLSRITLETPAAIIEAALSKHRDSSNDHEAEMEMISRTRASSSPILSHHSNLSQQQHQLPPPLPLPLPLPPPPPPTPTPTPTQQQQQQQQQQQLQQHQPHQPDTDDEVEDLSINRKSDQRVIMSPPIVKEEMIDPPENLSRK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01560568;
- 90% Identity
- iTF_00452036;
- 80% Identity
- iTF_00452036;