Dcoc004223.1
Basic Information
- Insect
- Dinocampus coccinellae
- Gene Symbol
- KBTBD4
- Assembly
- GCA_963920625.1
- Location
- OY987185.1:10048797-10050795[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 6.8 4.7e+03 -2.9 1.3 35 45 190 200 189 200 0.91 2 5 1.9e-07 0.00014 21.3 0.0 2 38 204 240 203 246 0.88 3 5 2.1e-12 1.5e-09 37.1 0.0 5 39 257 290 254 297 0.84 4 5 0.23 1.6e+02 1.8 0.0 21 33 324 336 310 341 0.80 5 5 1.8e-13 1.2e-10 40.6 0.1 5 39 369 403 368 407 0.93
Sequence Information
- Coding Sequence
- ATGTctgaaaattcaaatcaacCTCGAATTTCTGAAGTTGATCAGAGTTATTGTTTCAAATGGAATGATTATCAAAATCATTTGTCCGGTGTGGTTCAACAACTTTTTGACGAAGACTGTATGGTGGATGTGACACTTTGTGTTGCTGGCGAACGTATACATGCACATCGGATAGTTTTATGTGCATGTAGTACTTTGTTTCAGgaAGTTCTCAGTGAATCTAACGAAGGTCATCCtactattataattactgATATTTCTCCGGAAGATATAAGATCAATTGTAGAGTTTTCTTATCATGGAGAAGTGAAAATTCCTGTAGAAAATATTGGCGATCTTCTTGATGCTGCTCATTCACTCAAGATATGTGGACTGATGgagATTGAAGGATTAGATGAAAGTGATTCATGTGGAAATGCAAAAGATTCcttagagaataataatagtggaAATAATTTAGATGATTCGAGTGATTCACAAAATAAAGTATGGCAGACGGTATTTAAGGAAGATGATTCTGTAGATAATTCTGGTTTAAATGAAGAAGGAgttaaagtgaataaaaaaaaaagaaaacgtaGACGTGAAACAGTGAAAAGAGAATATAGCAATGATATGCTAGAGGCAGCAATAAATGATGTTCGAACAGGACAATCACTCATAGATGCAGCTTCTAAGAATAAAGTACCACGTTCAACGCTTTATATGCGTGCCAAAGCTTTAGGTATACAGCTAAATGCTGCGAGAAATGAATATCCCGCTGAATGTATTAAAGCAGCTATCAATGCAGTAATTAATGGTGCAAGTTTTCAACAGGCATCAGATATGTATAGCATTCCAAAAACAGTATTGTGGAGACGAATACAAAAAGAAGGTTATCACATATTAAGATCGGAAATGAAAAGAACATACGATGCTGGTAAAAGGGAGGCTGCTGTTAAAGCTTTGGAAAGAGGGGAAAATCTCACAAAAGTTGCATTAGAATTCAAGataCCGAAGACAACATTATTTAGGGATAAAACAAAACTAGTAGATCAGGGTAAATTGCCTGAATCTTTTTGGAAAAAACGCAAGACTGAAGATgaggaaatgaagaaaattcgtCTTGAAGAGGCGGTTGCGGCATGTATAGAAGGTAAAATGTCGCAAGCTGCGGCAGCAGTTGCTTTTCATATTCCGAAAACAACAATATGGCGTCGacttcaaaaagaaaatagaaaagcagatccaaatgatatttataaaagacaAACGAGATCAATTGATACATCCATTgacagtaaaataaaatgtgaacaAAATGTGGAATTTTCGTTGTGTGAGGTTTCATCGGATATTCCGATAACTTACATTGATGAAAATAGTTTACCAGATGattctgtaataattttaactaCGGGAGACGTTGAAGGACTTGACATAGATGATAATCGTGAAATAATAGTGAGTACGGATTCTGGTCATGAATATGAGTCCTGCCCAATAAACATggaagaaaattcaaattatacgACGTCTGAGAGTTAA
- Protein Sequence
- MSENSNQPRISEVDQSYCFKWNDYQNHLSGVVQQLFDEDCMVDVTLCVAGERIHAHRIVLCACSTLFQEVLSESNEGHPTIIITDISPEDIRSIVEFSYHGEVKIPVENIGDLLDAAHSLKICGLMEIEGLDESDSCGNAKDSLENNNSGNNLDDSSDSQNKVWQTVFKEDDSVDNSGLNEEGVKVNKKKRKRRRETVKREYSNDMLEAAINDVRTGQSLIDAASKNKVPRSTLYMRAKALGIQLNAARNEYPAECIKAAINAVINGASFQQASDMYSIPKTVLWRRIQKEGYHILRSEMKRTYDAGKREAAVKALERGENLTKVALEFKIPKTTLFRDKTKLVDQGKLPESFWKKRKTEDEEMKKIRLEEAVAACIEGKMSQAAAAVAFHIPKTTIWRRLQKENRKADPNDIYKRQTRSIDTSIDSKIKCEQNVEFSLCEVSSDIPITYIDENSLPDDSVIILTTGDVEGLDIDDNREIIVSTDSGHEYESCPINMEENSNYTTSES
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01001509;
- 90% Identity
- iTF_00452040;
- 80% Identity
- iTF_00452040;