Basic Information

Gene Symbol
kn
Assembly
GCA_963920625.1
Location
OY987191.1:588152-593853[-]

Transcription Factor Domain

TF Family
COE
Domain
COE domain
PFAM
AnimalTFDB
TF Group
Helix-turn-helix
Description
This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 6.2e-120 3e-116 388.8 5.6 205 564 1 359 1 370 0.84

Sequence Information

Coding Sequence
ATGCGACGATTTCAggtGATAATATCAACACAAGTTGGAGTTGATGGACCACTTTTAGCAATATCTGACAACATGTTTGTTCACAACAACAGCAAACACGGACGCAGAGCGAAACGACTTGACCCAAGTGATCACGGTGAATATAAcagttTATATCCGGCACTGCCATTGCAAACGCCGTGTATCAAAGCAATATCTCCCAGTGAAGGTTGGACGGCTGGTGGATCaacagttattattattggtgaaCATTTCTTTGATGGTCTTCAAGTTGTTTTTGGATCAATGTTGGTGTGGAGTGAGTTAATTACAGATCATGCAATCAAAGTTCAAACACCACCACGACAAACTCCTGGTGTAGTTGAAGTTACGTTGTCATATAAAAGTAAACAATTTTGCAAAGGTTCACCCGGTCGTTTTGTTTATGTTTcaTTGAGTGAGCCAACGATTGCATATGGATTTGATAGGTTACAAAAATTAGTTCCACGACATCCAGGTGATCCAGAAAAATTAccgaaagaaataatattaaaacgcGCTGCGGATTTAGCTGAAGCACTTTACAATATGCCACGCGCCAGTAATTCATCAATAGCAGGCGCACCAAGAAGTCCAGGCTCAAGTCATCCACCAGCACCTCCAACATCAACCTCCAATACAGCATTCAATTCGTATACAGGTCAATTGGCAGTTACCGTGCAAGAAAATGGCAGTACAGCCAAGTGGACAGACGACGGTGGCTCAGTGAGCGCTGGAGGAGgaggcggtggtggtggtggtggtggtggtgtaatAGGAGGCGGAAGTGTTGATGGAGGTGGTAGCGGTGACAGTTATAGACAAAGCAGTAGTGTAAGCCCGAGGGGGATGGTTGGCAGCGGTGGTTATTGCGGTAGTTCCGCGAGTACACCACACAGCCACAGCACAACCGGAAGTTACTCTGTTGCCAATCCTTACACTGGCAGTCCCACATTTTATACATCtccACACGAACAATATGGCATTTTCTATTCGTCCGGGGACGGGAGTGCATTCGCCCCCGTTGTCCGGCCACCAACAACCTCAGTCCCACCGCACTGGTCCACACAGCACCATCTTGCAACAGCCGctcaataa
Protein Sequence
MRRFQVIISTQVGVDGPLLAISDNMFVHNNSKHGRRAKRLDPSDHGEYNSLYPALPLQTPCIKAISPSEGWTAGGSTVIIIGEHFFDGLQVVFGSMLVWSELITDHAIKVQTPPRQTPGVVEVTLSYKSKQFCKGSPGRFVYVSLSEPTIAYGFDRLQKLVPRHPGDPEKLPKEIILKRAADLAEALYNMPRASNSSIAGAPRSPGSSHPPAPPTSTSNTAFNSYTGQLAVTVQENGSTAKWTDDGGSVSAGGGGGGGGGGGGVIGGGSVDGGGSGDSYRQSSSVSPRGMVGSGGYCGSSASTPHSHSTTGSYSVANPYTGSPTFYTSPHEQYGIFYSSGDGSAFAPVVRPPTTSVPPHWSTQHHLATAAQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01417498;
90% Identity
iTF_01001044;
80% Identity
iTF_00451669;