Basic Information

Gene Symbol
Xbp1_1
Assembly
GCA_963920625.1
Location
OY987187.1:5486714-5488382[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 2.5e-15 1.7e-12 46.9 12.0 2 61 88 147 88 154 0.95
2 2 2.7 1.8e+03 -1.2 0.3 35 49 215 229 212 236 0.78

Sequence Information

Coding Sequence
ATGAGCTCACTTCGAAGTGTCATCATCACATTGCCAAAAGGCatatcaacatcaacaacagctGGTCAAGTAAATAAtcgtaataattttacaacatCAATTTTGACAAATAAATCATCGAATCCAACGAAAATAGAAACtaaaaaaatgcataaaatacataaaatgcaATTGGAAGTGCCGTCAGATACGCAGAGTGAGCTTGTTAAAACTGGTGTTTGgatgagagggaaaaaaaggCGACTGGATCACCTAACATGGGAGGAAAAAATTCAACGAAAaaaattgaagaatCGAGTTGCTGCACAAACATCAAGAGACCGTAAAAAAGCTAAATTAGATGAATTGGAAGAAACAGTTAAtgatttaatggaaaaaaatacatttcttACGCAAGAGTGTGCAATGTTGCGAGCACAAAATGAATCATTAATGGCCGAGACAAAACGTTGGAGAAAAGAGAATAATGGAAATTCAATGGATGAACGTTATTGTTCGATGTGTCGGGGTCGTGTTGGGTGGAGCAACACAACTGACATCGTCCCCAATACCGACAACAAGTTCCGTGATTCTATTGAAGATCCTGACACTGTACCTCCTTTGGATGAACTCCTTGGCGACATCCAATGCGACGATTATCTCGAACGACTCGAAGAACTTGCAGAGAGTCTTTTGCGCGAAGTTACCGCTGAAGTGGAAGCAACTTCTGAGGGATCAAATGAACAAATCATCGTCAAACAAGATACCCCTGAAGAAATTGATGATACAAAGAAAATGGTGGGGCAGACATCAAAAAATGTGGAAACCAGTGCAGCCTGCAAGAGCGTAAATTCTTACCAATCCGAtccaatatcaataattgaatcaCCTGGTGCGGTACAACAAGTTGAAACggaaaaaatacgaaaattaaTACCTACGGGATCGTTCAAACACAAAATTGAAGTTAAACAAGAACCAATTGCAAATGATATAGATACAGTTTATGGTACATACGATGAAACAACAAATtgtataacaattatttatccgggtgacgatgatgatagtgTGAAAATAGGAGAATGCGTTCAGGAAATTACAAGTGAAGATTCTGCACATTTAACAccaaattattcatatcaagATGATTTTTCACCGGCTTACACACTCGCTGATTCAATGTCACCGTCAAGTATTCATTCAGATGATGATTTTAATGTCACTGTACCGTCATATAAAGTTGAAACATGTTTATCTGATTGTGGTTATGAATCACATGATTCACCAAAATCCAATAAATTTGTGGCTTCTACGACGCAACTCACAGATTTGTGGCACGAAAGTTTTTCAGAATTATTCCCGAGTTTGGCATga
Protein Sequence
MSSLRSVIITLPKGISTSTTAGQVNNRNNFTTSILTNKSSNPTKIETKKMHKIHKMQLEVPSDTQSELVKTGVWMRGKKRRLDHLTWEEKIQRKKLKNRVAAQTSRDRKKAKLDELEETVNDLMEKNTFLTQECAMLRAQNESLMAETKRWRKENNGNSMDERYCSMCRGRVGWSNTTDIVPNTDNKFRDSIEDPDTVPPLDELLGDIQCDDYLERLEELAESLLREVTAEVEATSEGSNEQIIVKQDTPEEIDDTKKMVGQTSKNVETSAACKSVNSYQSDPISIIESPGAVQQVETEKIRKLIPTGSFKHKIEVKQEPIANDIDTVYGTYDETTNCITIIYPGDDDDSVKIGECVQEITSEDSAHLTPNYSYQDDFSPAYTLADSMSPSSIHSDDDFNVTVPSYKVETCLSDCGYESHDSPKSNKFVASTTQLTDLWHESFSELFPSLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-