Basic Information

Gene Symbol
pnr_2
Assembly
GCA_958336335.1
Location
OY284471.1:11245663-11255446[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.2e-16 8.5e-13 48.1 4.9 1 34 730 762 730 764 0.98

Sequence Information

Coding Sequence
atggaaaaatgtaCGAATGCACATGATAACTACTTAATTAGTGAAGATGAACAACATCAACAATCACGTGAACGTAGTGCAGCTGCAGCCTTAACAGAATTAAGAAATTGTAGTAATTTAAGCCGCCAGAGTTCTAAAAAAGTATTTACATTATCACCgttaccatcatcatcatcatcatcaacatcatcatttacatcatcatcaatatcaaCATCGTCACCATCATTACCAATAACATACTCTTCTTGCTtgacatcatcatcatcattatcgtcaacaccaccaccaccaccatcatcaacACCACCGTCAACATCAGTAGTTACCTCAATACTCAGTAAAAATCATATAGACCATTTGGAAGCGAATTCAGTATCTGTGATACCAATTGATACAAAATCATCATCGACAACATCtagaataaataatgtaatgaatataaaatcattaagaCCACCACCAGCACCCGTAATCCATatgaataataacaataataataataataatggtggtgaaattaaaaacactctcaataataataataataataatattaccaTTAATGATAATagcaacaataataataataactatagtAATTTAAATAGTATTAGCTTATCATCACAATTACAACGTTTAGAAACGGCTAATGTACTAATGGATATAAGTAAGCAAGTGATAATATCACCACCAAATTCAACTCGACAATCTCCAAAATTAGTATTGgaacaaaaaattaatcaacatcatcagcaacaacaacaacatcggcaacagcaacaacaacaacagcatcaGCAACAACAAGAGCAACTACGACAACAATATCAGCAACAACAACGTCAGCGTCTTCAAAAAACTCGTTCACAACAACAATCAAGTATTAATGCCTCTGTGATAAATACAAAACGATCAACATTGATCAACAGCGAAGAAATCGATTTATCGAgtaaatattcaaaatctGATGTATTAGTTTTAAAGCAATCCATTCCATTATCCTCATCCtcatcatcgtcgtcatcctcctcctcctcatcatcatcatcatcatcctcgCCGTCATCACCATGGTCAATATCATCATCTCCACCACCACAATCATCCGCGCAAACATCACATTCTGTTAGTATATCTATGGGtgtaaataatcataataataataataataataataattccgCTGTAATTATGTCACCGGCACTTATAATAACACCAACTACAACATTAACACCAATTACAACAACGAAAAATTCTCCAATTGTAACCCGAGTAATAAAATCATCGTCATCAGCAGCATCCTCATTGACCTCATCACCGTTAATgataaatcatcatcaacaacaacaacatcaacaacatcacCATCAAGATGAAAATTATGATGATATGAGTCAAAATAGTGATTCAAGTGATGATAGTTCAGATCCCGAACGTCTACAAATGGATATTAGTTCACAGGAAAATGCCGATTCACAAGATTCGgctaaattatataataatattcttcaaAATGGAgagaatttaataaataataattgtcgTCGTGGCAATAGGCGACATTGGCGGTCACCATCGGAAGCATCTGACGGTGTACAATCAGAAGAACACGGTTGTAGTACCGATCCGGCCACTACCCAATTATGGCAGGTATTAGCACAGCAAACAGTGAATGGTGGAGGTAACGAGGCAACTCAATTAATACGACAAATCATAAGTTACAGAAATTTAGGATTACAGTTACCGGCCGGACTGGGCGTATCTACATCACCAATTGTTAATGATCATCCGATTTCATTATTAAAGAATGAATTAAATTCACCAAATTCACAAGATCATATTAGTAAgacatcatcgtcatcttcatcatcatcatcgtcggCACGTCGAAAACAATCGTGTCCCAGCCGAACACCATTTGATGGTAGCGGTAATGAGGCAAACATAAATAAACGCATTAAATTGGAACAATCTCATTTACCTGATTCCATGATTATGGTCGGCGGCGGTGGTGGtactggtggtggtggtggtggtggtagttGTAGTAGTAGTGCTAGTGGTAGTGTTGGTGTGGCTGGTGTAAGTGGGCTtcaagaaaataatttatcctGGACACCAGATGATAGATCAAAGGGATCACAAAGTGGAAAGAATTCAAATACTCAACCAAAAGATATGTCCTGTACAAATTGTGGTACATTAACGACAACAATTTGGCGACGAAATAATCGTGGTGAAATGGTTTGTAATGCATGCGGTTTATACTATAAATTACATGGTATTGATCGGCCACATTCAATGCGACGCGATACAATTCATACACGTCGACGAAGACCAAAAGGTGATAAATCGAGTCGAAGAAGATCAAAAGCAACCGATCAAAATGTATCAAATGTTGATGGTGAAattggaaataataataataatcatggtggtggcggtggtggtgctaataataataataataatggtagTGGTGGTGGTAATAATGGTGGTAGTGGTGCTAATGGTGGAAGAGCTAACAATAACagtgatattaataataccaCAGTTAAATTAGATTCTGAGATACAAGCTTTACAAAATCATAATCTATTGGTTGCGTTAAGAGGTGTAGCTCGTAGTGGTAATGCACATTTTCCAATGCCgcATTATGCAGCACATTTTTTGCGTGGTACAAATTATGGTGATGATGCAATTGAAGAAGTACAATTACCGTGTGGTGAAGAATTGGTGACCGGTGACGATAGTAATCATGAAAATGATGTAGATTCATCAAATCTACCTCTTAATTTAGTATCAACACAATTTGCAGCCGATTAA
Protein Sequence
MEKCTNAHDNYLISEDEQHQQSRERSAAAALTELRNCSNLSRQSSKKVFTLSPLPSSSSSSTSSFTSSSISTSSPSLPITYSSCLTSSSSLSSTPPPPPSSTPPSTSVVTSILSKNHIDHLEANSVSVIPIDTKSSSTTSRINNVMNIKSLRPPPAPVIHMNNNNNNNNNGGEIKNTLNNNNNNNITINDNSNNNNNNYSNLNSISLSSQLQRLETANVLMDISKQVIISPPNSTRQSPKLVLEQKINQHHQQQQQHRQQQQQQQHQQQQEQLRQQYQQQQRQRLQKTRSQQQSSINASVINTKRSTLINSEEIDLSSKYSKSDVLVLKQSIPLSSSSSSSSSSSSSSSSSSSSPSSPWSISSSPPPQSSAQTSHSVSISMGVNNHNNNNNNNNSAVIMSPALIITPTTTLTPITTTKNSPIVTRVIKSSSSAASSLTSSPLMINHHQQQQHQQHHHQDENYDDMSQNSDSSDDSSDPERLQMDISSQENADSQDSAKLYNNILQNGENLINNNCRRGNRRHWRSPSEASDGVQSEEHGCSTDPATTQLWQVLAQQTVNGGGNEATQLIRQIISYRNLGLQLPAGLGVSTSPIVNDHPISLLKNELNSPNSQDHISKTSSSSSSSSSSARRKQSCPSRTPFDGSGNEANINKRIKLEQSHLPDSMIMVGGGGGTGGGGGGGSCSSSASGSVGVAGVSGLQENNLSWTPDDRSKGSQSGKNSNTQPKDMSCTNCGTLTTTIWRRNNRGEMVCNACGLYYKLHGIDRPHSMRRDTIHTRRRRPKGDKSSRRRSKATDQNVSNVDGEIGNNNNNHGGGGGGANNNNNNGSGGGNNGGSGANGGRANNNSDINNTTVKLDSEIQALQNHNLLVALRGVARSGNAHFPMPHYAAHFLRGTNYGDDAIEEVQLPCGEELVTGDDSNHENDVDSSNLPLNLVSTQFAAD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-