Dfeb010146.1
Basic Information
- Insect
- Dilophus febrilis
- Gene Symbol
- -
- Assembly
- GCA_958336335.1
- Location
- OY284470.1:10830918-10834726[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 17 0.24 14 6.8 2.3 2 23 228 250 227 250 0.93 2 17 0.58 33 5.6 0.2 3 23 255 276 254 276 0.96 3 17 7.9 4.5e+02 2.0 0.3 8 20 280 292 279 295 0.88 4 17 0.0026 0.15 13.0 1.9 3 23 308 329 307 329 0.96 5 17 0.012 0.71 10.8 1.0 1 23 339 362 339 362 0.94 6 17 2.6 1.5e+02 3.5 0.9 3 12 400 409 399 410 0.91 7 17 0.054 3.1 8.8 0.7 3 23 430 451 429 451 0.96 8 17 0.026 1.5 9.8 1.4 1 23 455 477 455 477 0.98 9 17 0.00068 0.039 14.8 3.5 2 23 485 507 484 507 0.96 10 17 0.036 2.1 9.4 7.5 3 23 514 534 512 534 0.96 11 17 9.8e-05 0.0056 17.5 9.2 1 23 539 561 539 561 0.98 12 17 0.00087 0.05 14.5 1.3 3 23 569 589 567 589 0.95 13 17 0.0061 0.35 11.8 3.7 1 23 604 627 604 627 0.97 14 17 3.1e-05 0.0018 19.0 3.5 1 23 636 658 636 658 0.99 15 17 1.3e-05 0.00073 20.2 1.9 1 23 665 687 665 687 0.97 16 17 0.0078 0.45 11.5 3.6 1 23 693 716 693 716 0.97 17 17 0.028 1.6 9.7 0.1 2 17 723 738 722 739 0.93
Sequence Information
- Coding Sequence
- ATGACAACAATAGACGTGCGTGATTATGATTTAGAAAAAACTTGTAGAATGTGTTTGTACAGCAACAACATGTCAAATCAagatatgataaaaatatttgaatctGGTTCTTCAAAAATTTCCGTTGATggtgaattaaaattattaaaatttaaaATTTCACCAAATGACGGATTACCACAACAAATCTGCACGGATTGTAtgaattgtttaataaatattaataaatttcgtGTGGTAGGTGTAGAATCTCAAACAATTTTAGAACGTTATTTTAAGGATAATTTGGTTAATTCACTTCGAGTACCATCACAACCACATCAGCAACAATTAATGACTGATGAAATAGTTTGGATTAAATCCGAAATGGATGACGTTGATAAATTGGATCAATTATTGCCATCAAATGAAAAGcaatatgatgaatataatgaTTACAGCGATTTATTACAAACATATGATAGTGATAATGAAATGGTACTTGAAAATGATTTCGAAAAAACTGATATCGTAGTCAATGcagaaaaacatttaaaatctAACGATTTGAAATTGTGTAACGCCAAGGAATTGAAATGTCTAtgtaaatattgtttaaaacactgtattaatatagaattaaaagattATCAACAACAGCAACCAACAGACGAATGTAAATTAGATccaataaatgAAATTAAATGTTTGCATTGTGATTTAAACTGCAAAAATATCGAGGATTTTGTCAAACATACAAATGCTATTCATCCTGGATTATTGTGTTGGATATGCAAAGAGTTTTATTTGGATAAAACGGAATTAACAATACATTGGAATTCGCAACATGGTGATGAAAAagaATATGTAAGTAGATCGTCATTACGAAAGCATGTACATTGccatcataaaaaaaaatatgctttAGATGTAATTCGTAATTGTGATGAATGTAAATGCAGTTTTACAACTAGTGATGGTTATGAAATACATAAACGGAATGCACATAAAAAGTACACAGATATTATCCATAGATATAAATGTGATATCTGTGAACATACCTTTAAAAGTTACGGTATTATACGACGTCATATTTCGGTTGAGCATTCAATGAACTCAAATCGATCCTCATTGCGGATtactaaaaaattaataaaaaaacaacggAATAAAAATGTAAAGCCAAACAATGAGATTGAACAAAAATCCAGATGGCTCTGTAAATTTTGTGGAAAACATTTTGTTACCGGTAATAAAACCGATTATCAACatcctattgataaatgtaatttagaAAAGGAACCTAATTGCCGACAATGTGTGGAAAAATTCAATAACATTGATGACTATATAAAGCatgtaaatacaaaacattcaCCTGGTTATACCTGCACAATTTGTAACGTTAATTGTTTCGATAAATTAACATTATCAATACATTTGGCTACACATACCGCGGaGGAATGCGTCATAAAATGTGATGAATGTAATCGATATTTTAAAACACGAAAAACCCTGCAATATCATAAAAAACGAATGCATATTGTTTCGGAACATTTATGTCATATTTGTTCATTGAAATTCGATAACCATGTGAAATTCAAGGCGCACATGAAAAGGCATACtcgtataaaatttaaatgttccCATTGTGATAAAACATTTAGTCACCGATATACATTCAAACAGCATTCGCGAATACATTCCGGTGAACTTACACATCTTTGTAATATTTGTGGAATAGcgTTCATGAATACAACAACTCTTTCGTCACACATGAAACAACATAAAGATTTATCTCTTAAGTCAACACAATCTAAACCGAATATATATCAGTGTAAATTTTGTGATAAAGcTTATACGGTTTATTCATCATGGTATCATCATGAACGTAATTATCATCCGAAGGGTATTGCTGCAAAGTTTTATCAATGCGATAAATgtgataaacattttataacgAAGAAAGCATTTGAATACCATATAAATTCGCATGATGATGCGGAACGTAAACATAAGTGTCAAGAATGCCCGATGGCATTCAAACGTAATGCTCATTTGCAAAATCATGTCCTGGTGCATAATGGCGATAAACCGCATACCTGTAAATACTGTAATCAATCATTTCGATTGCGATGGGATAAAAACACTCATGAACGTACCgctcataccggtgaaaaaccaTCTCAATGTCCACGTTGTGACATgtcattcataaataatagACAATTGCAAAaTTTAGAGTACAATCAACATTACCATATTGATCAATCTGCATATAAGAATGCAGTCTATGCGAGTATAAAAAggcaaaaaaacaattcagaATCAGACCAAGATCTAAGAGCGAATCATAGAAATCTTCTCGGGACGGCTCTATTTTTAGTATAA
- Protein Sequence
- MTTIDVRDYDLEKTCRMCLYSNNMSNQDMIKIFESGSSKISVDGELKLLKFKISPNDGLPQQICTDCMNCLININKFRVVGVESQTILERYFKDNLVNSLRVPSQPHQQQLMTDEIVWIKSEMDDVDKLDQLLPSNEKQYDEYNDYSDLLQTYDSDNEMVLENDFEKTDIVVNAEKHLKSNDLKLCNAKELKCLCKYCLKHCINIELKDYQQQQPTDECKLDPINEIKCLHCDLNCKNIEDFVKHTNAIHPGLLCWICKEFYLDKTELTIHWNSQHGDEKEYVSRSSLRKHVHCHHKKKYALDVIRNCDECKCSFTTSDGYEIHKRNAHKKYTDIIHRYKCDICEHTFKSYGIIRRHISVEHSMNSNRSSLRITKKLIKKQRNKNVKPNNEIEQKSRWLCKFCGKHFVTGNKTDYQHPIDKCNLEKEPNCRQCVEKFNNIDDYIKHVNTKHSPGYTCTICNVNCFDKLTLSIHLATHTAEECVIKCDECNRYFKTRKTLQYHKKRMHIVSEHLCHICSLKFDNHVKFKAHMKRHTRIKFKCSHCDKTFSHRYTFKQHSRIHSGELTHLCNICGIAFMNTTTLSSHMKQHKDLSLKSTQSKPNIYQCKFCDKAYTVYSSWYHHERNYHPKGIAAKFYQCDKCDKHFITKKAFEYHINSHDDAERKHKCQECPMAFKRNAHLQNHVLVHNGDKPHTCKYCNQSFRLRWDKNTHERTAHTGEKPSQCPRCDMSFINNRQLQNLEYNQHYHIDQSAYKNAVYASIKRQKNNSESDQDLRANHRNLLGTALFLV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -