Basic Information

Insect: Dilophus febrilis
Gene Symbol: -
Assembly: GCA_958336335.1
Location: OY284471.1:22107617-22111394[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.5 2.6e+02 2.8 0.2 1 19 5 23 5 25 0.90

2 17 9.7e-06 0.00055 20.6 1.9 1 23 209 230 209 230 0.98

3 17 0.06 3.4 8.7 0.5 1 23 253 276 253 276 0.92

4 17 0.022 1.2 10.1 0.0 2 23 313 334 312 334 0.96

5 17 0.048 2.8 9.0 0.9 2 23 404 427 403 427 0.91

6 17 0.35 20 6.3 6.5 1 23 429 451 429 451 0.97

7 17 0.00016 0.0091 16.8 4.9 2 23 457 478 456 478 0.96

8 17 0.0015 0.086 13.7 1.0 1 23 483 505 483 505 0.97

9 17 0.027 1.5 9.8 0.7 2 23 511 534 511 534 0.92

10 17 0.23 13 6.9 0.6 2 18 834 849 834 854 0.70

11 17 0.0066 0.38 11.7 2.1 1 23 877 900 877 900 0.97

12 17 0.0045 0.26 12.2 0.2 2 23 939 961 938 961 0.94

13 17 0.0011 0.063 14.1 1.2 2 22 1018 1038 1017 1041 0.90

14 17 4.5 2.6e+02 2.8 2.8 1 23 1043 1065 1043 1065 0.93

15 17 0.0086 0.49 11.3 0.9 2 23 1071 1092 1071 1092 0.97

16 17 5.3e-05 0.003 18.3 2.1 1 23 1096 1118 1096 1118 0.99

17 17 0.45 26 5.9 3.4 1 23 1123 1147 1123 1147 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.5	2.6e+02	2.8	0.2	1	19	5	23	5	25	0.90
2	17	9.7e-06	0.00055	20.6	1.9	1	23	209	230	209	230	0.98
3	17	0.06	3.4	8.7	0.5	1	23	253	276	253	276	0.92
4	17	0.022	1.2	10.1	0.0	2	23	313	334	312	334	0.96
5	17	0.048	2.8	9.0	0.9	2	23	404	427	403	427	0.91
6	17	0.35	20	6.3	6.5	1	23	429	451	429	451	0.97
7	17	0.00016	0.0091	16.8	4.9	2	23	457	478	456	478	0.96
8	17	0.0015	0.086	13.7	1.0	1	23	483	505	483	505	0.97
9	17	0.027	1.5	9.8	0.7	2	23	511	534	511	534	0.92
10	17	0.23	13	6.9	0.6	2	18	834	849	834	854	0.70
11	17	0.0066	0.38	11.7	2.1	1	23	877	900	877	900	0.97
12	17	0.0045	0.26	12.2	0.2	2	23	939	961	938	961	0.94
13	17	0.0011	0.063	14.1	1.2	2	22	1018	1038	1017	1041	0.90
14	17	4.5	2.6e+02	2.8	2.8	1	23	1043	1065	1043	1065	0.93
15	17	0.0086	0.49	11.3	0.9	2	23	1071	1092	1071	1092	0.97
16	17	5.3e-05	0.003	18.3	2.1	1	23	1096	1118	1096	1118	0.99
17	17	0.45	26	5.9	3.4	1	23	1123	1147	1123	1147	0.98

Sequence Information

Coding Sequence: atGTCCGACAGCTATAAATGTGGTAATTGCAGATTGATATTCattgaattgtataaattCCTTGAACATGAAAGTCAATGTAATGTTAAGATTTTAACGACATTGACAAATGTTAATAATACAGACGTCGTTTCTCCATCAGTTACAAAGTTCCCTACCGCCACATTGAATGGTCATGATCCGCCAAATGATTCAACGGTAATGGTAATTTCCCAGCAACAAAATCAACAtgaaatacaacaacaacaactattactaaacaaaatacaaacattacaacaacaacaacagctacaacagcaacagcaaccACAACAATTCGAACGAGTGTTTCAATCATCACATTGCAAAACCATAATCGATATATCAACGGCCCAAAATGTATTGAAACAAGAAGTTACAACTATAAAAACAGAATTTCAACATCAGAAAGCAGTAGATCCGTCAATAATAGACTATCATATCATAACGAAATTAGcagaagaaaataaaatgaatattaataaaaaaccgaaaaagagtcgtaaaaaaaaggaaaaaattcCATTGGATCCAAATGCACCGAAGAAGATTCGAGTAAGAAAAAAAGCTATTCGCAAAAAAGCATGTGAATTAAGTAGATCGTATCAATGTAAAATATGTGGACGCAGTTTTCGTCGAAATAAACTAAAAGATCATATGCAAATTCATTTGGTGTGGCCAGATTCGTTAGAGGGAAACATCGGTAAAGGTAATTTCGATCCATTGGCCGGAAACTATCTTTGTAATTATTGCCCAGAACGTGTTGAATCATTTGTACAATTACGTAGTCATATACATGCATTACATAAAGATGTTAAGGTTTATATGTGCCCGATGAGCGAATGTCGTCAATTATTTGGATTTCAAGATGTAATGATTGAACACAGTAAAGAGTGTGCATTTAAATCGAACGTCCAATGTCCAATATGTTATCAATATTTCAGTGTAATACGTGAATTGGAAATACATATTTTGGAACATAAAAAGGAAATTGATAATGAAgttaaaatacaacaacaatcTCAACAATCGCCATCCGAACCAATTCGAATCGCTTTAGAAATGATAACAAATTTGGATGTTAAAAAAGCGATTGTCAATGAAAAGGTTTTGGCGAACGGAACTGCTGGTGGCATTACAAAACCAAGCAATGATGGCGATGGCGATTCAGGTGAATTACATCCATTACAATGTCCCGTAtgttatgtaaaatataaaagtaaaataatgttattgaACCATTTGCATACGGATACCCATGAACATGAATGCGAGGTGTGTCAAAAAGTATTTCTGCACAGAAGACAACTTACAATGCATTCACATACACATCGTAATTTACGGTGTATCTGTCCAATATGTAATCgttcatttaaaatgcataaaatgttaaaatctCATATGCTTACGCATACCGATCAgaaatttttttgtgatatatgCGGTTCAGTGTCTACCCTGAAATCAAATTTGGTTAAACATTTTAAGACGCATATCACTGAAATGGAAAAATGTGGATTAAACGGTTGTAAAAGAATGTTCCGATCAATGGATAGGTTAAATGCGCATCGaataatgcataaaaaaataattaaagcAAGTGGTCGTCGTCGAACATCAAGAAAACGTCGACAATCGACCGATTCTAATGATGACgatgataataaaatcaaaCGAATTACCAGACGACAAACTGTtagtgcaaaaaaaaatgttgtaattCCCGGGATTGTCGTCGAAGGTGGTAAAATAACCAAAGGTATTGATATTGTACAAGAATATACATTATTCGGTTTaagtaatataattaatgGCCAAGTAAAAGCTGAAGAAGATATAATCGAAATAAACACAACATCAGCAACATCCTCAACAGCATCAAAtgacaaaattaaaataaaatctgaATTAATAAAAGATGAACTTGCTGATGATGGTGAGGCTGATGGTGAAGctgatgataatgatgatgatgatgatgatgatgatgatgatcatcatGATGATGCTTCGGTAGATATTGCTCCTATAGAGGAGGTAAAGATGGAATTCTTTGAATCGATTAATGAAACCGTTACGATATCTGATGATAAGATATTCAATCATAAGAAAAAACTTGTCAATTGTACTTTAAgtgataaaaatgaaacaattgATACGAAAGACAATAATAGCGGAATAGATGTTTTGGAAGAAGATAAAGATAAAGTTCCAGAAACGCAACaccatatgaaaaataaaaatttgtcaagaaataaaaatcaacCGAACACTTCAGACAGTAGCCGCAACACTAATGATGACGCTGACGATTCAGATAATAGACCGATTTTAGAGTTAGTCGAATCAATGATCGAACgggaAAAAGTTAAACGGCCAAGGAAAAGCACGAAAAGACCACTTACTCCAAAAAAGGAACGCGACCGGTTGTTTACTGTTCGTCTTGGGAAGGGAACAAGACATGTTGCAGGAATTGCAGAATGTAATGTATGCGGTCGACATTTTAAAACTACCGCTGCAACAAAACATATAGAGGCTCATCGTGTTTGgtcattttccaaaaaaactCACATTGGCAGTAGCACATTTGATTCAAACGATAAACTATATCGGTGTCCATATTGTTCGGCCTCATTTCAATTGCATCCGAAATTACGTTCGCATATGAATCAAAATCATAACAGTGAAAAAGTATTTGCATGTCCGCTAAGTAAATGCCAGCAATTGTTTGACGACGATCATGAATTTATTGCACATTGTCGTGAATGTGTATTTAACTCATCCGATAATGTACGTTGTCCAATATGTCATAAATTTTTCATCGGTGACGAGGaattaaatacacataaaataattgctcatcaaataattaacaataattcaGACGTAGAACATGATAATGGTGTTCAGAAGGATGCCGTAGGTGATGATAATCAAATTATGACCACCGGCGATACAGTACCTGGAAATCAATTACACGGTGGTAAAGTTGGAACAATCAACAATTCAACGGTGAAACCTAGTAAAGTGAGATGTACAATTTGCCGCGAAccatttaagaataaaattatgttgGCAAAACACATGCATCGAGATTCACATGATcatcaatgtatatattgtggTAAAGAATTTTTATCGTTACGAAAAGTACGTCGACATTATGTTAAACATCGTAATTCACCAGCAGTGTGTTACATCTGTGGTAAACTATTTGATTGCAAAGACACTTTAAATGCGCATGTACGAATGCATACAATACGTTATACCTGCGATATTtgccaaaaaaaatttgtacaaaaaGCAGCCATGTCCCATCACCTTAAGATGCACGACGTACCACTGTATAGATGTCCACATGAAGGTTGTAAGTGTGTACGTCGCAATAAGGTATTAATGGAAAAACATcttaataatcataataaaaaaaaagtaagaCGTTCGAGACGGCCTAGAAATAATAAGAATTCGGAACCGCCTATCGATGCTACTAATCCATATCCAAATCGGATCACGATACCATTTCAAATCGGATCACAATTTGATGTGAATAACAGTAGCTACTGTTGA
Protein Sequence: MSDSYKCGNCRLIFIELYKFLEHESQCNVKILTTLTNVNNTDVVSPSVTKFPTATLNGHDPPNDSTVMVISQQQNQHEIQQQQLLLNKIQTLQQQQQLQQQQQPQQFERVFQSSHCKTIIDISTAQNVLKQEVTTIKTEFQHQKAVDPSIIDYHIITKLAEENKMNINKKPKKSRKKKEKIPLDPNAPKKIRVRKKAIRKKACELSRSYQCKICGRSFRRNKLKDHMQIHLVWPDSLEGNIGKGNFDPLAGNYLCNYCPERVESFVQLRSHIHALHKDVKVYMCPMSECRQLFGFQDVMIEHSKECAFKSNVQCPICYQYFSVIRELEIHILEHKKEIDNEVKIQQQSQQSPSEPIRIALEMITNLDVKKAIVNEKVLANGTAGGITKPSNDGDGDSGELHPLQCPVCYVKYKSKIMLLNHLHTDTHEHECEVCQKVFLHRRQLTMHSHTHRNLRCICPICNRSFKMHKMLKSHMLTHTDQKFFCDICGSVSTLKSNLVKHFKTHITEMEKCGLNGCKRMFRSMDRLNAHRIMHKKIIKASGRRRTSRKRRQSTDSNDDDDNKIKRITRRQTVSAKKNVVIPGIVVEGGKITKGIDIVQEYTLFGLSNIINGQVKAEEDIIEINTTSATSSTASNDKIKIKSELIKDELADDGEADGEADDNDDDDDDDDDDHHDDASVDIAPIEEVKMEFFESINETVTISDDKIFNHKKKLVNCTLSDKNETIDTKDNNSGIDVLEEDKDKVPETQHHMKNKNLSRNKNQPNTSDSSRNTNDDADDSDNRPILELVESMIEREKVKRPRKSTKRPLTPKKERDRLFTVRLGKGTRHVAGIAECNVCGRHFKTTAATKHIEAHRVWSFSKKTHIGSSTFDSNDKLYRCPYCSASFQLHPKLRSHMNQNHNSEKVFACPLSKCQQLFDDDHEFIAHCRECVFNSSDNVRCPICHKFFIGDEELNTHKIIAHQIINNNSDVEHDNGVQKDAVGDDNQIMTTGDTVPGNQLHGGKVGTINNSTVKPSKVRCTICREPFKNKIMLAKHMHRDSHDHQCIYCGKEFLSLRKVRRHYVKHRNSPAVCYICGKLFDCKDTLNAHVRMHTIRYTCDICQKKFVQKAAMSHHLKMHDVPLYRCPHEGCKCVRRNKVLMEKHLNNHNKKKVRRSRRPRNNKNSEPPIDATNPYPNRITIPFQIGSQFDVNNSSYC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -