Basic Information

Insect: Dilophus febrilis
Gene Symbol: -
Assembly: GCA_958336335.1
Location: OY284470.1:10814738-10819006[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 19 0.089 5.1 8.2 0.4 2 23 318 340 318 340 0.95

2 19 0.06 3.4 8.7 0.4 1 22 343 364 343 364 0.94

3 19 0.23 13 6.8 1.2 2 23 372 393 372 393 0.96

4 19 0.0037 0.21 12.5 7.0 1 23 398 420 398 420 0.97

5 19 4.3e-05 0.0025 18.6 2.8 1 23 426 449 426 449 0.97

6 19 0.01 0.58 11.1 0.7 1 23 458 480 458 480 0.96

7 19 0.00018 0.01 16.6 0.6 1 23 488 511 488 511 0.94

8 19 0.043 2.5 9.1 0.5 2 23 617 639 617 639 0.97

9 19 0.0033 0.19 12.7 0.6 2 23 644 665 644 665 0.95

10 19 0.03 1.7 9.6 2.7 2 23 673 695 672 695 0.95

11 19 0.016 0.91 10.5 1.3 3 23 702 722 700 722 0.97

12 19 0.0015 0.085 13.7 4.9 1 23 727 749 727 749 0.97

13 19 0.00096 0.055 14.3 2.6 3 23 757 777 755 777 0.96

14 19 0.032 1.8 9.5 5.8 1 23 789 812 789 812 0.92

15 19 0.87 50 5.0 4.5 1 23 821 843 821 843 0.97

16 19 3.9e-05 0.0022 18.7 1.1 1 23 850 873 850 873 0.93

17 19 0.00013 0.0072 17.1 0.3 1 23 879 901 879 901 0.96

18 19 0.0055 0.32 11.9 2.6 1 23 907 930 907 930 0.97

19 19 0.46 26 5.9 0.2 1 14 936 949 936 952 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	19	0.089	5.1	8.2	0.4	2	23	318	340	318	340	0.95
2	19	0.06	3.4	8.7	0.4	1	22	343	364	343	364	0.94
3	19	0.23	13	6.8	1.2	2	23	372	393	372	393	0.96
4	19	0.0037	0.21	12.5	7.0	1	23	398	420	398	420	0.97
5	19	4.3e-05	0.0025	18.6	2.8	1	23	426	449	426	449	0.97
6	19	0.01	0.58	11.1	0.7	1	23	458	480	458	480	0.96
7	19	0.00018	0.01	16.6	0.6	1	23	488	511	488	511	0.94
8	19	0.043	2.5	9.1	0.5	2	23	617	639	617	639	0.97
9	19	0.0033	0.19	12.7	0.6	2	23	644	665	644	665	0.95
10	19	0.03	1.7	9.6	2.7	2	23	673	695	672	695	0.95
11	19	0.016	0.91	10.5	1.3	3	23	702	722	700	722	0.97
12	19	0.0015	0.085	13.7	4.9	1	23	727	749	727	749	0.97
13	19	0.00096	0.055	14.3	2.6	3	23	757	777	755	777	0.96
14	19	0.032	1.8	9.5	5.8	1	23	789	812	789	812	0.92
15	19	0.87	50	5.0	4.5	1	23	821	843	821	843	0.97
16	19	3.9e-05	0.0022	18.7	1.1	1	23	850	873	850	873	0.93
17	19	0.00013	0.0072	17.1	0.3	1	23	879	901	879	901	0.96
18	19	0.0055	0.32	11.9	2.6	1	23	907	930	907	930	0.97
19	19	0.46	26	5.9	0.2	1	14	936	949	936	952	0.92

Sequence Information

Coding Sequence: atgaaaaattgtgcATTAGTATGTTGTAATAATACTGAAAATGAAGAGAGTAGTAATGAAATTGGATTTCAtagATTTCCAAGTAATCCCACGTTATTGACTAAATGGTTTAATGCATTTAAAGGTACACAATTACGTACAAATAGTGCCTTATTTTTGTGTTCTAAacattataatgaatttattgcAAAACAAGACGTAATTGTGAATTTCCAGCAGCAGCAGGACACATTCAGAAATGACCTTgcaaatattgaaaataatccCATTAGTTATGATAATTTAGAGCAAATTTGTAGAACATGTTTAAAAATGGCGAAATATAATGAGTACTTGACACCTATATTTAATCAAGAAAATGCAAGTAGTACTGCTGCTGCAACACTATCCATTTATgaacaattacaattattaaaattaacaaTTACACCTCAAGATGAATTACCGAAGCAAATATGTTCCGATTGTTTAGCGTTTTTGACAAACATGAGCGCATTTCATATTAAAAGTTTACGGTCACAAAATCTGTTAGAAGAATATTTACACAGTGAATTGCTAAAAAAGCAATtcaatattattgataatttaatggATATAAAATCGGAAACAGATGACGATGAAATATCTTTAATTCCAGTCGAATTTAAAGATTGTGATAGTTTTGTGGACGAAAATGATTCATGTCTTAATGTATTACGACAATTGGAAGATTGTAATAACGATGAAATTGCTGAAAATGTTGATGAGAAATTAAATGCATTAACtgaagaaaaagaagaagaagtgcaaatattaaatgatgTGGTGACCAAAAccaatgaaaatgataatcTTTTTAAAGACCTAAATATAAAATGGCtttgtaaattttgtaataaacaTGGGGTTAGTGGAAAAGTAAAAGATCATCAACAACCAAATGCAAATACATGTAAATTAGAACAggaaCCGAAATGTCGAAGTTGTACGGAATCATTTGCCAATATAGATGAGTATGTCAaacatgtaaataattatcattCAGAATTCGTATGTTGTATTtgtaatcaatattttattgatataaagGAATTATCAATACATTTGTCAACCGTAAATACAATAAGCGATAATGTATGTcatatttgtttgttaaaatttGAAAGTTTAGGAcgatataaatatcatatgacTATTCATTCAACTGTTCGACATAAATGTGATCAATGTGATAAATCATTTTTACATAAAGATCATTTGAAAAGTCACGAACAAATACATTCGAGAAGCAATTCCTATTCATGTGAAATTTGTGGAAAAGTATGCAATAATGCAAATACGTTACGCAAACATAAACAACGTTACCataaaaaagaattgaaaTCACAAATATACAGTTGTGATCGATGTAATAAAAGTTTTGCGACGTTAGGCGCCTCtgaattacataaaaaaacacataaagaTACAGAAAGTCGCCGGTATAAATGTGATATTTGTGATagtacatttaaaaatttcctTAATTTACGAAGTCACATTTTAGACGGACATGTGGcaatgtttaatataaaaccgTTGTCCATCACTAATGAATTTGCAAGTAAACGTATGgaaatcatcatcaatacTAATGATGATACCGTATATGATCCGGATGAATGGCGTAATGGTGATATTTGTCATGATTCTAATAAAAACTCTCACGTGTCCATGTCTACAAGTGAACGCGTAGAAACATCCTTTGACGACAACGATAAAccacaaaatagaaaaaaatggcTTTGTAAATTTTGTGGACAACATTATGTTTATGGTTTGTTAACAGACTATCAAGTACCATCAAGTAAATGCAACATTGAGgAACCTAAATGTCAAAGATGTGCAGAAACATTTGATAGTCTCGATCAGTTTATCATAcatgtaaataaatttcatcCGCCACCAGCCGTATGTTGGATTTGTAAATATACCTGTTCGGATAATTTAGAGCTAAATAAACATATCGCCTTGCATACCAAAAatgagtCGAAGGTCACATGTGATCAATGCGATCGattatttaaaactaaaaGGCATGTGTTATTGCATAAACAACGAGTACATCCGCGAACGGATATGTTTTGTCGCATTTGTTcgataaaatttgaatttgcCAATACATTTCGAAGTCATATGCGTGAACATAAAGGTGAAGTACACATCTGTACATTTTGTAATAGATCGTTTATGCATAGATCACTATTGCTCGCTCATGAACGTAAACATGCTGGTGAAGTATCACATCTTTGTAATATTTGCGgtttagCATTTCATGATGGtgataaattgtataaacatATGAAAACACATAAGGAAACGACCGATGGAAATGCACCAGAATCATATAAATGTGgattttgtgataaaatatataccaataaatcATCTTGGTATCATCATGAACATTACTATCATCCGAATGGCATCGATGCGGATATATTTCATTGTAATTTGTGCGATCGAAATTACCTAACAAAGAAATCATATGAATATCATGTTAAATCTCATACGGATGTGGAACGCAAACATAAATGCAAAGAATGTCCGGCGGCCTTTAAACGATCCGCTCATCTACAAAATCATGTGCTGGGTGTTCACCTAAAGAAAAGACCATTTAAATGCATCTTTTGCGATAAAGCATTTGTACAAAATGGTGATTTGAATGTGCATTTGCGTCTCCATAACGGGGATAAACcacataaatgtaaatattgtGATGAATCATTTATGTTACGCATTGAAATGAATAGTCATGAACGTACACAACATACTGGTGAGAAACCATATCAATGCACCCGATGCGAATTAACTTTCGTATCGAATTCAGCGAGACGAGGTAtgcttataatataa
Protein Sequence: MKNCALVCCNNTENEESSNEIGFHRFPSNPTLLTKWFNAFKGTQLRTNSALFLCSKHYNEFIAKQDVIVNFQQQQDTFRNDLANIENNPISYDNLEQICRTCLKMAKYNEYLTPIFNQENASSTAAATLSIYEQLQLLKLTITPQDELPKQICSDCLAFLTNMSAFHIKSLRSQNLLEEYLHSELLKKQFNIIDNLMDIKSETDDDEISLIPVEFKDCDSFVDENDSCLNVLRQLEDCNNDEIAENVDEKLNALTEEKEEEVQILNDVVTKTNENDNLFKDLNIKWLCKFCNKHGVSGKVKDHQQPNANTCKLEQEPKCRSCTESFANIDEYVKHVNNYHSEFVCCICNQYFIDIKELSIHLSTVNTISDNVCHICLLKFESLGRYKYHMTIHSTVRHKCDQCDKSFLHKDHLKSHEQIHSRSNSYSCEICGKVCNNANTLRKHKQRYHKKELKSQIYSCDRCNKSFATLGASELHKKTHKDTESRRYKCDICDSTFKNFLNLRSHILDGHVAMFNIKPLSITNEFASKRMEIIINTNDDTVYDPDEWRNGDICHDSNKNSHVSMSTSERVETSFDDNDKPQNRKKWLCKFCGQHYVYGLLTDYQVPSSKCNIEEPKCQRCAETFDSLDQFIIHVNKFHPPPAVCWICKYTCSDNLELNKHIALHTKNESKVTCDQCDRLFKTKRHVLLHKQRVHPRTDMFCRICSIKFEFANTFRSHMREHKGEVHICTFCNRSFMHRSLLLAHERKHAGEVSHLCNICGLAFHDGDKLYKHMKTHKETTDGNAPESYKCGFCDKIYTNKSSWYHHEHYYHPNGIDADIFHCNLCDRNYLTKKSYEYHVKSHTDVERKHKCKECPAAFKRSAHLQNHVLGVHLKKRPFKCIFCDKAFVQNGDLNVHLRLHNGDKPHKCKYCDESFMLRIEMNSHERTQHTGEKPYQCTRCELTFVSNSARRGMLII

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00451077;
90% Identity: iTF_00451077;
80% Identity: iTF_00451077;